RNA–Protein interactions for RNA: ENST00000515500.5

LEF1-221, Transcript of lymphoid enhancer binding factor 1, humanhuman

TSL 2

Gene LEF1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEF1-221ENST00000515500 NISCHQ9Y2I1 1504 aa29.35■■■□□ 2.29
LEF1-221ENST00000515500 CCDC180Q9P1Z9 1646 aa26.3■■□□□ 1.8
LEF1-221ENST00000515500 ABCC9O60706 1549 aa25.83■■□□□ 1.73
LEF1-221ENST00000515500 RB1CC1Q8TDY2 1594 aa24.8■■□□□ 1.56
LEF1-221ENST00000515500 NACADO15069 1562 aa24.68■■□□□ 1.54
LEF1-221ENST00000515500 DCAF8L2P0C7V8 631 aa24.55■■□□□ 1.52
LEF1-221ENST00000515500 ZCCHC6Q5VYS8 1495 aaKnown RBP24.42■■□□□ 1.5
LEF1-221ENST00000515500 MYO15BQ96JP2 1530 aa24.41■■□□□ 1.5
LEF1-221ENST00000515500 UNC13AQ9UPW8 1703 aa24.38■■□□□ 1.49
LEF1-221ENST00000515500 DCAF1Q9Y4B6 1507 aa24.25■■□□□ 1.47
LEF1-221ENST00000515500 BICRAQ9NZM4 1560 aa24.03■■□□□ 1.44
LEF1-221ENST00000515500 PABPN1Q86U42 306 aaKnown RBP eCLIP24.03■■□□□ 1.44
LEF1-221ENST00000515500 SCRIBQ14160 1630 aa23.97■■□□□ 1.43
LEF1-221ENST00000515500 DNAJC5BQ9UF47 199 aa23.78■■□□□ 1.4
LEF1-221ENST00000515500 SHROOM4Q9ULL8 1493 aa23.73■■□□□ 1.39
LEF1-221ENST00000515500 EIF4G1Q04637 1599 aaKnown RBP23.43■■□□□ 1.34
LEF1-221ENST00000515500 CC2D2AQ9P2K1 1620 aa23.41■■□□□ 1.34
LEF1-221ENST00000515500 CECR2Q9BXF3 1484 aa23.21■■□□□ 1.31
LEF1-221ENST00000515500 SMARCA4P51532 1647 aa22.89■■□□□ 1.25
LEF1-221ENST00000515500 BAZ1AQ9NRL2 1556 aaPredicted RBP22.79■■□□□ 1.24
LEF1-221ENST00000515500 SMARCA2P51531 1590 aa22.73■■□□□ 1.23
LEF1-221ENST00000515500 ATAD2BQ9ULI0 1458 aa22.73■■□□□ 1.23
LEF1-221ENST00000515500 NCAPD3P42695 1498 aa22.71■■□□□ 1.23
LEF1-221ENST00000515500 HMGXB3Q12766 1538 aa22.67■■□□□ 1.22
LEF1-221ENST00000515500 MROH2BQ7Z745 1585 aa22.63■■□□□ 1.21
LEF1-221ENST00000515500 PEG3Q9GZU2 1588 aa22.61■■□□□ 1.21
LEF1-221ENST00000515500 BAZ1BQ9UIG0 1483 aaKnown RBP22.57■■□□□ 1.2
LEF1-221ENST00000515500 WIZO95785 1651 aa22.45■■□□□ 1.18
LEF1-221ENST00000515500 ERCC6Q03468 1493 aa22.29■■□□□ 1.16
LEF1-221ENST00000515500 NESP48681 1621 aa22.29■■□□□ 1.16
LEF1-221ENST00000515500 LAMC3Q9Y6N6 1575 aa22.24■■□□□ 1.15
LEF1-221ENST00000515500 RSF1Q96T23 1441 aaPredicted RBP22.23■■□□□ 1.15
LEF1-221ENST00000515500 KIF21AQ7Z4S6 1674 aa22.16■■□□□ 1.14
LEF1-221ENST00000515500 TOP2AP11388 1531 aaKnown RBP22.16■■□□□ 1.14
LEF1-221ENST00000515500 CUX2O14529 1486 aa22.11■■□□□ 1.13
LEF1-221ENST00000515500 THOC2Q8NI27 1593 aaKnown RBP22.08■■□□□ 1.12
LEF1-221ENST00000515500 CADPSQ9ULU8 1353 aa22.02■■□□□ 1.12
LEF1-221ENST00000515500 PDS5BQ9NTI5 1447 aa22.02■■□□□ 1.12
LEF1-221ENST00000515500 PRDM2Q13029 1718 aa21.94■■□□□ 1.1
LEF1-221ENST00000515500 CFTRP13569 1480 aa21.88■■□□□ 1.09
LEF1-221ENST00000515500 CEP164Q9UPV0 1460 aa21.86■■□□□ 1.09
LEF1-221ENST00000515500 MRC2Q9UBG0 1479 aa21.85■■□□□ 1.09
LEF1-221ENST00000515500 CCDC88BA6NC98 1476 aa21.83■■□□□ 1.09
LEF1-221ENST00000515500 FANCD2Q9BXW9 1451 aa21.83■■□□□ 1.09
LEF1-221ENST00000515500 WDR62O43379 1518 aa21.8■■□□□ 1.08
LEF1-221ENST00000515500 URB2Q14146 1524 aaKnown RBP21.64■■□□□ 1.05
LEF1-221ENST00000515500 DNAJC5Q9H3Z4 198 aa21.56■■□□□ 1.04
LEF1-221ENST00000515500 SUPT5HO00267 1087 aaKnown RBP21.52■■□□□ 1.04
LEF1-221ENST00000515500 TOPBP1Q92547 1522 aa21.48■■□□□ 1.03
LEF1-221ENST00000515500 DNMBPQ6XZF7 1577 aa21.47■■□□□ 1.03
LEF1-221ENST00000515500 ABCC8Q09428 1581 aa21.44■■□□□ 1.02
LEF1-221ENST00000515500 IFT140Q96RY7 1462 aa21.37■■□□□ 1.01
LEF1-221ENST00000515500 EIF4G3O43432 1585 aaKnown RBP21.31■■□□□ 1
LEF1-221ENST00000515500 ZNF608Q9ULD9 1512 aaPredicted RBP21.29■■□□□ 1
LEF1-221ENST00000515500 TARBP1Q13395 1621 aaKnown RBP21.29■■□□□ 1
LEF1-221ENST00000515500 POLA1P09884 1462 aaPredicted RBP21.27■■□□□ 1
LEF1-221ENST00000515500 CUX1P39880 1505 aa21.25■□□□□ 0.99
LEF1-221ENST00000515500 FGD5Q6ZNL6 1462 aa21.21■□□□□ 0.99
LEF1-221ENST00000515500 RAD54L2Q9Y4B4 1467 aa21.18■□□□□ 0.98
LEF1-221ENST00000515500 WDR97A6NE52 1622 aa21.15■□□□□ 0.98
LEF1-221ENST00000515500 SOGA1O94964 1423 aa21.14■□□□□ 0.98
LEF1-221ENST00000515500 AQRO60306 1485 aaKnown RBP eCLIP21.13■□□□□ 0.974e-6■■□□□ 12.5
LEF1-221ENST00000515500 CHD1O14646 1710 aa21.13■□□□□ 0.97
LEF1-221ENST00000515500 BIVM-ERCC5R4GMW8 1640 aa21.08■□□□□ 0.97
LEF1-221ENST00000515500 PBRM1Q86U86 1689 aa21.06■□□□□ 0.96
LEF1-221ENST00000515500 OSCARQ8IYS5 282 aa21.06■□□□□ 0.96
LEF1-221ENST00000515500 TDRD9Q8NDG6 1382 aaKnown RBP21.04■□□□□ 0.96
LEF1-221ENST00000515500 TOP2BQ02880 1626 aa21.04■□□□□ 0.96
LEF1-221ENST00000515500 SYNJ1O43426 1573 aa21.03■□□□□ 0.96
LEF1-221ENST00000515500 WRNQ14191 1432 aaPredicted RBP eCLIP21■□□□□ 0.95
LEF1-221ENST00000515500 SNAPC4Q5SXM2 1469 aa20.99■□□□□ 0.95
LEF1-221ENST00000515500 ABCA5Q8WWZ7 1642 aa20.98■□□□□ 0.95
LEF1-221ENST00000515500 ABCA10Q8WWZ4 1543 aa20.97■□□□□ 0.95
LEF1-221ENST00000515500 GRIN2BQ13224 1484 aa20.94■□□□□ 0.94
LEF1-221ENST00000515500 GAPVD1Q14C86 1478 aa20.93■□□□□ 0.94
LEF1-221ENST00000515500 MAGI1Q96QZ7 1491 aaPredicted RBP20.93■□□□□ 0.94
LEF1-221ENST00000515500 RIMBP3CA6NJZ7 1639 aa20.92■□□□□ 0.94
LEF1-221ENST00000515500 RIMBP3BA6NNM3 1639 aa20.92■□□□□ 0.94
LEF1-221ENST00000515500 RIMBP3Q9UFD9 1639 aa20.92■□□□□ 0.94
LEF1-221ENST00000515500 FBLN2P98095 1184 aa20.91■□□□□ 0.94
LEF1-221ENST00000515500 TRIM41Q8WV44 630 aa20.85■□□□□ 0.93
LEF1-221ENST00000515500 ARHGEF11O15085 1522 aa20.83■□□□□ 0.93
LEF1-221ENST00000515500 SYNJ2O15056 1496 aa20.83■□□□□ 0.93
LEF1-221ENST00000515500 ADAMTS12P58397 1594 aa20.8■□□□□ 0.92
LEF1-221ENST00000515500 CHMP7Q8WUX9 453 aaPredicted RBP20.79■□□□□ 0.92
LEF1-221ENST00000515500 CLASP1Q7Z460 1538 aa20.78■□□□□ 0.92
LEF1-221ENST00000515500 ERICH3Q5RHP9 1530 aa20.73■□□□□ 0.91
LEF1-221ENST00000515500 GRIN2AQ12879 1464 aa20.69■□□□□ 0.9
LEF1-221ENST00000515500 FHAD1B1AJZ9 1412 aa20.66■□□□□ 0.9
LEF1-221ENST00000515500 ARAP1Q96P48 1450 aa20.65■□□□□ 0.9
LEF1-221ENST00000515500 CEP170Q5SW79 1584 aa20.64■□□□□ 0.9
LEF1-221ENST00000515500 CUL7Q14999 1698 aa20.58■□□□□ 0.89
LEF1-221ENST00000515500 NUP160Q12769 1436 aa20.58■□□□□ 0.88
LEF1-221ENST00000515500 CYB5RLQ6IPT4 315 aa20.57■□□□□ 0.88
LEF1-221ENST00000515500 KIF27Q86VH2 1401 aa20.57■□□□□ 0.88
LEF1-221ENST00000515500 SHROOM2Q13796 1616 aa20.53■□□□□ 0.88
LEF1-221ENST00000515500 RUSC2Q8N2Y8 1516 aa20.5■□□□□ 0.87
LEF1-221ENST00000515500 ERCC6L2Q5T890 1561 aa20.5■□□□□ 0.87
LEF1-221ENST00000515500 IGF1RP08069 1367 aa20.45■□□□□ 0.86
LEF1-221ENST00000515500 CARMIL1Q5VZK9 1371 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms