RNA–Protein interactions for RNA: ENST00000515490.1

GATB-211, Transcript of glutamyl-tRNA amidotransferase subunit B, humanhuman

TSL 4

Gene GATB, Length 733 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATB-211ENST00000515490 NISCHQ9Y2I1 1504 aa35.36■■■■□ 3.25
GATB-211ENST00000515490 ABCC9O60706 1549 aa32.31■■■□□ 2.76
GATB-211ENST00000515490 CCDC180Q9P1Z9 1646 aa31.85■■■□□ 2.69
GATB-211ENST00000515490 DNAJC5BQ9UF47 199 aa30.87■■■□□ 2.53
GATB-211ENST00000515490 RB1CC1Q8TDY2 1594 aa30.47■■■□□ 2.47
GATB-211ENST00000515490 NACADO15069 1562 aa30.18■■■□□ 2.42
GATB-211ENST00000515490 PABPN1Q86U42 306 aaKnown RBP eCLIP30.03■■■□□ 2.4
GATB-211ENST00000515490 UNC13AQ9UPW8 1703 aa30■■■□□ 2.39
GATB-211ENST00000515490 DCAF8L2P0C7V8 631 aa29.87■■■□□ 2.37
GATB-211ENST00000515490 BICRAQ9NZM4 1560 aa29.83■■■□□ 2.37
GATB-211ENST00000515490 MYO15BQ96JP2 1530 aa29.65■■■□□ 2.34
GATB-211ENST00000515490 ZCCHC6Q5VYS8 1495 aaKnown RBP29.23■■■□□ 2.27
GATB-211ENST00000515490 CC2D2AQ9P2K1 1620 aa29.19■■■□□ 2.26
GATB-211ENST00000515490 DCAF1Q9Y4B6 1507 aa29.14■■■□□ 2.25
GATB-211ENST00000515490 CECR2Q9BXF3 1484 aa29.11■■■□□ 2.25
GATB-211ENST00000515490 SHROOM4Q9ULL8 1493 aa29.11■■■□□ 2.25
GATB-211ENST00000515490 SCRIBQ14160 1630 aa29.05■■■□□ 2.24
GATB-211ENST00000515490 EIF4G1Q04637 1599 aaKnown RBP29.01■■■□□ 2.24
GATB-211ENST00000515490 DNAJC5Q9H3Z4 198 aa28.45■■■□□ 2.14
GATB-211ENST00000515490 NCAPD3P42695 1498 aa27.93■■■□□ 2.06
GATB-211ENST00000515490 CUX2O14529 1486 aa27.92■■■□□ 2.06
GATB-211ENST00000515490 ATAD2BQ9ULI0 1458 aa27.81■■■□□ 2.04
GATB-211ENST00000515490 ERCC6Q03468 1493 aa27.77■■■□□ 2.04
GATB-211ENST00000515490 NESP48681 1621 aa27.73■■■□□ 2.03
GATB-211ENST00000515490 SMARCA4P51532 1647 aa27.67■■■□□ 2.02
GATB-211ENST00000515490 HMGXB3Q12766 1538 aa27.66■■■□□ 2.02
GATB-211ENST00000515490 SMARCA2P51531 1590 aa27.6■■■□□ 2.01
GATB-211ENST00000515490 THOC2Q8NI27 1593 aaKnown RBP27.5■■□□□ 1.99
GATB-211ENST00000515490 BAZ1BQ9UIG0 1483 aaKnown RBP27.43■■□□□ 1.98
GATB-211ENST00000515490 PEG3Q9GZU2 1588 aa27.42■■□□□ 1.98
GATB-211ENST00000515490 BAZ1AQ9NRL2 1556 aaPredicted RBP27.39■■□□□ 1.97
GATB-211ENST00000515490 KIF21AQ7Z4S6 1674 aa27.32■■□□□ 1.96
GATB-211ENST00000515490 MROH2BQ7Z745 1585 aa27.31■■□□□ 1.96
GATB-211ENST00000515490 LAMC3Q9Y6N6 1575 aa27.31■■□□□ 1.96
GATB-211ENST00000515490 PDS5BQ9NTI5 1447 aa27.09■■□□□ 1.93
GATB-211ENST00000515490 CADPSQ9ULU8 1353 aa27.02■■□□□ 1.92
GATB-211ENST00000515490 WDR62O43379 1518 aa26.97■■□□□ 1.91
GATB-211ENST00000515490 TRIM41Q8WV44 630 aa26.97■■□□□ 1.91
GATB-211ENST00000515490 MRC2Q9UBG0 1479 aa26.97■■□□□ 1.91
GATB-211ENST00000515490 WIZO95785 1651 aa26.95■■□□□ 1.91
GATB-211ENST00000515490 CEP164Q9UPV0 1460 aa26.74■■□□□ 1.87
GATB-211ENST00000515490 FANCD2Q9BXW9 1451 aa26.73■■□□□ 1.87
GATB-211ENST00000515490 CFTRP13569 1480 aa26.67■■□□□ 1.86
GATB-211ENST00000515490 URB2Q14146 1524 aaKnown RBP26.63■■□□□ 1.85
GATB-211ENST00000515490 RSF1Q96T23 1441 aaPredicted RBP26.56■■□□□ 1.84
GATB-211ENST00000515490 OSCARQ8IYS5 282 aa26.54■■□□□ 1.84
GATB-211ENST00000515490 TOP2AP11388 1531 aaKnown RBP26.49■■□□□ 1.83
GATB-211ENST00000515490 RIMBP3CA6NJZ7 1639 aa26.39■■□□□ 1.82
GATB-211ENST00000515490 RIMBP3BA6NNM3 1639 aa26.39■■□□□ 1.82
GATB-211ENST00000515490 RIMBP3Q9UFD9 1639 aa26.39■■□□□ 1.82
GATB-211ENST00000515490 ZNF608Q9ULD9 1512 aaPredicted RBP26.39■■□□□ 1.81
GATB-211ENST00000515490 PRDM2Q13029 1718 aa26.35■■□□□ 1.81
GATB-211ENST00000515490 CCDC88BA6NC98 1476 aa26.25■■□□□ 1.79
GATB-211ENST00000515490 ARHGEF11O15085 1522 aa26.24■■□□□ 1.79
GATB-211ENST00000515490 IFT140Q96RY7 1462 aa26.23■■□□□ 1.79
GATB-211ENST00000515490 TOPBP1Q92547 1522 aa26.21■■□□□ 1.79
GATB-211ENST00000515490 EIF4G3O43432 1585 aaKnown RBP26.16■■□□□ 1.78
GATB-211ENST00000515490 TARBP1Q13395 1621 aaKnown RBP26.06■■□□□ 1.76
GATB-211ENST00000515490 CHD1O14646 1710 aa26.05■■□□□ 1.76
GATB-211ENST00000515490 AQRO60306 1485 aaKnown RBP eCLIP26.04■■□□□ 1.76
GATB-211ENST00000515490 DNMBPQ6XZF7 1577 aa26.04■■□□□ 1.76
GATB-211ENST00000515490 ARAP1Q96P48 1450 aa26■■□□□ 1.75
GATB-211ENST00000515490 CYB5RLQ6IPT4 315 aa26■■□□□ 1.75
GATB-211ENST00000515490 ABCC8Q09428 1581 aa25.96■■□□□ 1.75
GATB-211ENST00000515490 POLA1P09884 1462 aaPredicted RBP25.92■■□□□ 1.74
GATB-211ENST00000515490 RAD54L2Q9Y4B4 1467 aa25.88■■□□□ 1.73
GATB-211ENST00000515490 FBLN2P98095 1184 aa25.79■■□□□ 1.72
GATB-211ENST00000515490 TDRD9Q8NDG6 1382 aaKnown RBP25.79■■□□□ 1.72
GATB-211ENST00000515490 CLASP1Q7Z460 1538 aa25.77■■□□□ 1.72
GATB-211ENST00000515490 TRHP20396 242 aaPredicted RBP25.74■■□□□ 1.71
GATB-211ENST00000515490 SNAPC4Q5SXM2 1469 aa25.73■■□□□ 1.71
GATB-211ENST00000515490 SOGA1O94964 1423 aa25.73■■□□□ 1.71
GATB-211ENST00000515490 FGD5Q6ZNL6 1462 aa25.69■■□□□ 1.7
GATB-211ENST00000515490 CUX1P39880 1505 aa25.67■■□□□ 1.7
GATB-211ENST00000515490 WDR97A6NE52 1622 aa25.59■■□□□ 1.69
GATB-211ENST00000515490 MAGI1Q96QZ7 1491 aaPredicted RBP25.58■■□□□ 1.69
GATB-211ENST00000515490 SYNJ1O43426 1573 aa25.56■■□□□ 1.68
GATB-211ENST00000515490 GRIN2BQ13224 1484 aa25.53■■□□□ 1.68
GATB-211ENST00000515490 CHMP7Q8WUX9 453 aaPredicted RBP25.52■■□□□ 1.68
GATB-211ENST00000515490 SYNJ2O15056 1496 aa25.52■■□□□ 1.68
GATB-211ENST00000515490 PBRM1Q86U86 1689 aa25.48■■□□□ 1.67
GATB-211ENST00000515490 ERCC6L2Q5T890 1561 aa25.44■■□□□ 1.66
GATB-211ENST00000515490 GAPVD1Q14C86 1478 aa25.43■■□□□ 1.66
GATB-211ENST00000515490 ABCA5Q8WWZ7 1642 aa25.41■■□□□ 1.66
GATB-211ENST00000515490 ABCA10Q8WWZ4 1543 aa25.36■■□□□ 1.65
GATB-211ENST00000515490 CEP170Q5SW79 1584 aa25.27■■□□□ 1.64
GATB-211ENST00000515490 GRIN2AQ12879 1464 aa25.26■■□□□ 1.63
GATB-211ENST00000515490 ADAMTS12P58397 1594 aa25.22■■□□□ 1.63
GATB-211ENST00000515490 NUP160Q12769 1436 aa25.22■■□□□ 1.63
GATB-211ENST00000515490 AEBP2Q6ZN18 517 aaPredicted RBP25.2■■□□□ 1.62
GATB-211ENST00000515490 SHROOM2Q13796 1616 aa25.19■■□□□ 1.62
GATB-211ENST00000515490 KIF13AQ9H1H9 1805 aa25.11■■□□□ 1.61
GATB-211ENST00000515490 BIVM-ERCC5R4GMW8 1640 aa25.1■■□□□ 1.61
GATB-211ENST00000515490 WRNQ14191 1432 aaPredicted RBP eCLIP25.08■■□□□ 1.61
GATB-211ENST00000515490 TOP2BQ02880 1626 aa25.07■■□□□ 1.6
GATB-211ENST00000515490 FHAD1B1AJZ9 1412 aa25.05■■□□□ 1.6
GATB-211ENST00000515490 ERICH3Q5RHP9 1530 aa24.99■■□□□ 1.59
GATB-211ENST00000515490 PRG4Q92954 1404 aaPredicted RBP24.95■■□□□ 1.59
GATB-211ENST00000515490 SUPT5HO00267 1087 aaKnown RBP24.94■■□□□ 1.58
GATB-211ENST00000515490 JPH4Q96JJ6 628 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms