RNA–Protein interactions for RNA: ENST00000515452.1

NR1I3-233, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 2 BASIC

Gene NR1I3, Length 1,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-233ENST00000515452 NISCHQ9Y2I1 1504 aa18.9■□□□□ 0.62
NR1I3-233ENST00000515452 ABCC9O60706 1549 aa17.62■□□□□ 0.41
NR1I3-233ENST00000515452 DNAJC5BQ9UF47 199 aa17.18■□□□□ 0.34
NR1I3-233ENST00000515452 CCDC180Q9P1Z9 1646 aa16.94■□□□□ 0.3
NR1I3-233ENST00000515452 RB1CC1Q8TDY2 1594 aa16.5■□□□□ 0.23
NR1I3-233ENST00000515452 PABPN1Q86U42 306 aaKnown RBP eCLIP16.4■□□□□ 0.22
NR1I3-233ENST00000515452 DNAJC5Q9H3Z4 198 aa16.31■□□□□ 0.2
NR1I3-233ENST00000515452 AEBP2Q6ZN18 517 aaPredicted RBP16.26■□□□□ 0.19
NR1I3-233ENST00000515452 NACADO15069 1562 aa16.26■□□□□ 0.19
NR1I3-233ENST00000515452 DCAF8L2P0C7V8 631 aa16.2■□□□□ 0.18
NR1I3-233ENST00000515452 UNC13AQ9UPW8 1703 aa15.99■□□□□ 0.15
NR1I3-233ENST00000515452 BICRAQ9NZM4 1560 aa15.99■□□□□ 0.15
NR1I3-233ENST00000515452 CECR2Q9BXF3 1484 aa15.97■□□□□ 0.15
NR1I3-233ENST00000515452 CHIC1Q5VXU3 224 aa15.97■□□□□ 0.15
NR1I3-233ENST00000515452 CC2D2AQ9P2K1 1620 aa15.86■□□□□ 0.13
NR1I3-233ENST00000515452 MYO15BQ96JP2 1530 aa15.84■□□□□ 0.13
NR1I3-233ENST00000515452 ZCCHC6Q5VYS8 1495 aaKnown RBP15.78■□□□□ 0.12
NR1I3-233ENST00000515452 SHROOM4Q9ULL8 1493 aa15.78■□□□□ 0.12
NR1I3-233ENST00000515452 EIF4G1Q04637 1599 aaKnown RBP15.67■□□□□ 0.1
NR1I3-233ENST00000515452 DCAF1Q9Y4B6 1507 aa15.62■□□□□ 0.09
NR1I3-233ENST00000515452 CUX2O14529 1486 aa15.48■□□□□ 0.07
NR1I3-233ENST00000515452 SCRIBQ14160 1630 aa15.41■□□□□ 0.06
NR1I3-233ENST00000515452 ERCC6Q03468 1493 aa15.29■□□□□ 0.04
NR1I3-233ENST00000515452 TRIM41Q8WV44 630 aa15.29■□□□□ 0.04
NR1I3-233ENST00000515452 NCAPD3P42695 1498 aa15.06■□□□□ 0
NR1I3-233ENST00000515452 NESP48681 1621 aa14.94□□□□□ -0.02
NR1I3-233ENST00000515452 ATAD2BQ9ULI0 1458 aa14.89□□□□□ -0.03
NR1I3-233ENST00000515452 THOC2Q8NI27 1593 aaKnown RBP14.85□□□□□ -0.03
NR1I3-233ENST00000515452 OSCARQ8IYS5 282 aa14.82□□□□□ -0.04
NR1I3-233ENST00000515452 HMGXB3Q12766 1538 aa14.8□□□□□ -0.04
NR1I3-233ENST00000515452 SMARCA2P51531 1590 aa14.79□□□□□ -0.04
NR1I3-233ENST00000515452 PDS5BQ9NTI5 1447 aa14.78□□□□□ -0.04
NR1I3-233ENST00000515452 LAMC3Q9Y6N6 1575 aa14.76□□□□□ -0.05
NR1I3-233ENST00000515452 BAZ1BQ9UIG0 1483 aaKnown RBP14.69□□□□□ -0.06
NR1I3-233ENST00000515452 SMARCA4P51532 1647 aa14.69□□□□□ -0.06
NR1I3-233ENST00000515452 KIF21AQ7Z4S6 1674 aa14.65□□□□□ -0.06
NR1I3-233ENST00000515452 BAZ1AQ9NRL2 1556 aaPredicted RBP14.63□□□□□ -0.07
NR1I3-233ENST00000515452 MROH2BQ7Z745 1585 aa14.61□□□□□ -0.07
NR1I3-233ENST00000515452 MRC2Q9UBG0 1479 aa14.61□□□□□ -0.07
NR1I3-233ENST00000515452 CADPSQ9ULU8 1353 aa14.6□□□□□ -0.07
NR1I3-233ENST00000515452 WDR62O43379 1518 aa14.56□□□□□ -0.08
NR1I3-233ENST00000515452 TRHP20396 242 aaPredicted RBP14.53□□□□□ -0.08
NR1I3-233ENST00000515452 PEG3Q9GZU2 1588 aa14.52□□□□□ -0.08
NR1I3-233ENST00000515452 WIZO95785 1651 aa14.52□□□□□ -0.09
NR1I3-233ENST00000515452 CYB5RLQ6IPT4 315 aa14.48□□□□□ -0.09
NR1I3-233ENST00000515452 RIMBP3CA6NJZ7 1639 aa14.48□□□□□ -0.09
NR1I3-233ENST00000515452 RIMBP3BA6NNM3 1639 aa14.48□□□□□ -0.09
NR1I3-233ENST00000515452 RIMBP3Q9UFD9 1639 aa14.48□□□□□ -0.09
NR1I3-233ENST00000515452 RSF1Q96T23 1441 aaPredicted RBP14.44□□□□□ -0.1
NR1I3-233ENST00000515452 CEP164Q9UPV0 1460 aa14.42□□□□□ -0.1
NR1I3-233ENST00000515452 ARHGEF11O15085 1522 aa14.4□□□□□ -0.1
NR1I3-233ENST00000515452 FANCD2Q9BXW9 1451 aa14.36□□□□□ -0.11
NR1I3-233ENST00000515452 TOP2AP11388 1531 aaKnown RBP14.29□□□□□ -0.12
NR1I3-233ENST00000515452 URB2Q14146 1524 aaKnown RBP14.25□□□□□ -0.13
NR1I3-233ENST00000515452 CFTRP13569 1480 aa14.25□□□□□ -0.13
NR1I3-233ENST00000515452 ARAP1Q96P48 1450 aa14.19□□□□□ -0.14
NR1I3-233ENST00000515452 IFT140Q96RY7 1462 aa14.19□□□□□ -0.14
NR1I3-233ENST00000515452 ZNF608Q9ULD9 1512 aaPredicted RBP14.18□□□□□ -0.14
NR1I3-233ENST00000515452 FBLN2P98095 1184 aa14.16□□□□□ -0.14
NR1I3-233ENST00000515452 SUPT5HO00267 1087 aaKnown RBP14.13□□□□□ -0.15
NR1I3-233ENST00000515452 PHF23Q9BUL5 403 aaPredicted RBP14.11□□□□□ -0.15
NR1I3-233ENST00000515452 CCDC88BA6NC98 1476 aa14.11□□□□□ -0.15
NR1I3-233ENST00000515452 PRDM2Q13029 1718 aa14.07□□□□□ -0.16
NR1I3-233ENST00000515452 AQRO60306 1485 aaKnown RBP eCLIP14.03□□□□□ -0.16
NR1I3-233ENST00000515452 ABCC8Q09428 1581 aa14.02□□□□□ -0.16
NR1I3-233ENST00000515452 ILDR1Q86SU0 546 aaPredicted RBP14.01□□□□□ -0.17
NR1I3-233ENST00000515452 CHD1O14646 1710 aa14.01□□□□□ -0.17
NR1I3-233ENST00000515452 EIF4G3O43432 1585 aaKnown RBP14□□□□□ -0.17
NR1I3-233ENST00000515452 TOPBP1Q92547 1522 aa14□□□□□ -0.17
NR1I3-233ENST00000515452 CHMP7Q8WUX9 453 aaPredicted RBP13.97□□□□□ -0.17
NR1I3-233ENST00000515452 TARBP1Q13395 1621 aaKnown RBP13.88□□□□□ -0.19
NR1I3-233ENST00000515452 CLASP1Q7Z460 1538 aa13.88□□□□□ -0.19
NR1I3-233ENST00000515452 TDRD9Q8NDG6 1382 aaKnown RBP13.87□□□□□ -0.19
NR1I3-233ENST00000515452 DNMBPQ6XZF7 1577 aa13.87□□□□□ -0.19
NR1I3-233ENST00000515452 SYNJ1O43426 1573 aa13.86□□□□□ -0.19
NR1I3-233ENST00000515452 GAPVD1Q14C86 1478 aa13.86□□□□□ -0.19
NR1I3-233ENST00000515452 SOGA1O94964 1423 aa13.83□□□□□ -0.2
NR1I3-233ENST00000515452 POLA1P09884 1462 aaPredicted RBP13.81□□□□□ -0.2
NR1I3-233ENST00000515452 SNAPC4Q5SXM2 1469 aa13.8□□□□□ -0.2
NR1I3-233ENST00000515452 RAD54L2Q9Y4B4 1467 aa13.8□□□□□ -0.2
NR1I3-233ENST00000515452 MAGI1Q96QZ7 1491 aaPredicted RBP13.78□□□□□ -0.2
NR1I3-233ENST00000515452 KDM4FA0A1W2PPD8 638 aa13.77□□□□□ -0.21
NR1I3-233ENST00000515452 SYNJ2O15056 1496 aa13.75□□□□□ -0.21
NR1I3-233ENST00000515452 GRIN2BQ13224 1484 aa13.74□□□□□ -0.21
NR1I3-233ENST00000515452 WDR97A6NE52 1622 aa13.73□□□□□ -0.21
NR1I3-233ENST00000515452 SENP3Q9H4L4 574 aaPredicted RBP13.71□□□□□ -0.21
NR1I3-233ENST00000515452 CUX1P39880 1505 aa13.7□□□□□ -0.22
NR1I3-233ENST00000515452 FAM69CQ0P6D2 419 aa13.69□□□□□ -0.22
NR1I3-233ENST00000515452 NPM1P06748 294 aaKnown RBP eCLIP13.65□□□□□ -0.22
NR1I3-233ENST00000515452 BIVM-ERCC5R4GMW8 1640 aa13.64□□□□□ -0.23
NR1I3-233ENST00000515452 FGD5Q6ZNL6 1462 aa13.63□□□□□ -0.23
NR1I3-233ENST00000515452 KIF13AQ9H1H9 1805 aa13.62□□□□□ -0.23
NR1I3-233ENST00000515452 TOP2BQ02880 1626 aa13.61□□□□□ -0.23
NR1I3-233ENST00000515452 ERCC6L2Q5T890 1561 aa13.6□□□□□ -0.23
NR1I3-233ENST00000515452 WRNQ14191 1432 aaPredicted RBP eCLIP13.59□□□□□ -0.23
NR1I3-233ENST00000515452 ABCC10Q5T3U5 1492 aa13.58□□□□□ -0.24
NR1I3-233ENST00000515452 CEP170Q5SW79 1584 aa13.55□□□□□ -0.24
NR1I3-233ENST00000515452 GRIN2AQ12879 1464 aa13.53□□□□□ -0.24
NR1I3-233ENST00000515452 FBXO41Q8TF61 875 aa13.52□□□□□ -0.25
NR1I3-233ENST00000515452 JPH4Q96JJ6 628 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms