RNA–Protein interactions for RNA: ENST00000515394.1

FAM193B-218, Transcript of family with sequence similarity 193 member B, humanhuman

TSL 2

Gene FAM193B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM193B-218ENST00000515394 NISCHQ9Y2I1 1504 aa22.99■■□□□ 1.27
FAM193B-218ENST00000515394 CCDC180Q9P1Z9 1646 aa20.39■□□□□ 0.86
FAM193B-218ENST00000515394 ABCC9O60706 1549 aa19.98■□□□□ 0.79
FAM193B-218ENST00000515394 DNAJC5BQ9UF47 199 aa19.52■□□□□ 0.72
FAM193B-218ENST00000515394 DCAF8L2P0C7V8 631 aa19.3■□□□□ 0.68
FAM193B-218ENST00000515394 RB1CC1Q8TDY2 1594 aa19.19■□□□□ 0.66
FAM193B-218ENST00000515394 NACADO15069 1562 aa19.17■□□□□ 0.66
FAM193B-218ENST00000515394 ZCCHC6Q5VYS8 1495 aaKnown RBP19.16■□□□□ 0.66
FAM193B-218ENST00000515394 MYO15BQ96JP2 1530 aa19.03■□□□□ 0.64
FAM193B-218ENST00000515394 DCAF1Q9Y4B6 1507 aa18.98■□□□□ 0.63
FAM193B-218ENST00000515394 UNC13AQ9UPW8 1703 aa18.77■□□□□ 0.59
FAM193B-218ENST00000515394 PABPN1Q86U42 306 aaKnown RBP eCLIP18.7■□□□□ 0.58
FAM193B-218ENST00000515394 SCRIBQ14160 1630 aa18.69■□□□□ 0.58
FAM193B-218ENST00000515394 BICRAQ9NZM4 1560 aa18.6■□□□□ 0.57
FAM193B-218ENST00000515394 DNAJC5Q9H3Z4 198 aa18.47■□□□□ 0.55
FAM193B-218ENST00000515394 SHROOM4Q9ULL8 1493 aa18.37■□□□□ 0.53
FAM193B-218ENST00000515394 EIF4G1Q04637 1599 aaKnown RBP18.13■□□□□ 0.49
FAM193B-218ENST00000515394 CC2D2AQ9P2K1 1620 aa18.05■□□□□ 0.48
FAM193B-218ENST00000515394 CECR2Q9BXF3 1484 aa18■□□□□ 0.47
FAM193B-218ENST00000515394 SMARCA4P51532 1647 aa17.83■□□□□ 0.45
FAM193B-218ENST00000515394 BAZ1AQ9NRL2 1556 aaPredicted RBP17.83■□□□□ 0.44
FAM193B-218ENST00000515394 MROH2BQ7Z745 1585 aa17.74■□□□□ 0.43
FAM193B-218ENST00000515394 ATAD2BQ9ULI0 1458 aa17.72■□□□□ 0.43
FAM193B-218ENST00000515394 SMARCA2P51531 1590 aa17.7■□□□□ 0.42
FAM193B-218ENST00000515394 NCAPD3P42695 1498 aa17.68■□□□□ 0.42
FAM193B-218ENST00000515394 PEG3Q9GZU2 1588 aa17.62■□□□□ 0.41
FAM193B-218ENST00000515394 BAZ1BQ9UIG0 1483 aaKnown RBP17.6■□□□□ 0.41
FAM193B-218ENST00000515394 HMGXB3Q12766 1538 aa17.6■□□□□ 0.41
FAM193B-218ENST00000515394 WIZO95785 1651 aa17.57■□□□□ 0.4
FAM193B-218ENST00000515394 RSF1Q96T23 1441 aaPredicted RBP17.55■□□□□ 0.4
FAM193B-218ENST00000515394 CUX2O14529 1486 aa17.44■□□□□ 0.38
FAM193B-218ENST00000515394 TOP2AP11388 1531 aaKnown RBP17.36■□□□□ 0.37
FAM193B-218ENST00000515394 NESP48681 1621 aa17.3■□□□□ 0.36
FAM193B-218ENST00000515394 TRIM41Q8WV44 630 aa17.28■□□□□ 0.36
FAM193B-218ENST00000515394 SUPT5HO00267 1087 aaKnown RBP17.23■□□□□ 0.35
FAM193B-218ENST00000515394 ERCC6Q03468 1493 aa17.22■□□□□ 0.35
FAM193B-218ENST00000515394 LAMC3Q9Y6N6 1575 aa17.22■□□□□ 0.35
FAM193B-218ENST00000515394 CADPSQ9ULU8 1353 aa17.19■□□□□ 0.34
FAM193B-218ENST00000515394 CCDC88BA6NC98 1476 aa17.17■□□□□ 0.34
FAM193B-218ENST00000515394 PDS5BQ9NTI5 1447 aa17.12■□□□□ 0.33
FAM193B-218ENST00000515394 CFTRP13569 1480 aa17.09■□□□□ 0.33
FAM193B-218ENST00000515394 KIF21AQ7Z4S6 1674 aa17.08■□□□□ 0.32
FAM193B-218ENST00000515394 FANCD2Q9BXW9 1451 aa17.01■□□□□ 0.31
FAM193B-218ENST00000515394 THOC2Q8NI27 1593 aaKnown RBP16.99■□□□□ 0.31
FAM193B-218ENST00000515394 CEP164Q9UPV0 1460 aa16.99■□□□□ 0.31
FAM193B-218ENST00000515394 PRDM2Q13029 1718 aa16.96■□□□□ 0.31
FAM193B-218ENST00000515394 MRC2Q9UBG0 1479 aa16.94■□□□□ 0.3
FAM193B-218ENST00000515394 WDR62O43379 1518 aa16.87■□□□□ 0.29
FAM193B-218ENST00000515394 URB2Q14146 1524 aaKnown RBP16.84■□□□□ 0.29
FAM193B-218ENST00000515394 TOPBP1Q92547 1522 aa16.74■□□□□ 0.27
FAM193B-218ENST00000515394 ABCC8Q09428 1581 aa16.72■□□□□ 0.27
FAM193B-218ENST00000515394 DNMBPQ6XZF7 1577 aa16.72■□□□□ 0.27
FAM193B-218ENST00000515394 CUX1P39880 1505 aa16.64■□□□□ 0.25
FAM193B-218ENST00000515394 IFT140Q96RY7 1462 aa16.61■□□□□ 0.25
FAM193B-218ENST00000515394 POLA1P09884 1462 aaPredicted RBP16.6■□□□□ 0.25
FAM193B-218ENST00000515394 OSCARQ8IYS5 282 aa16.59■□□□□ 0.25
FAM193B-218ENST00000515394 FGD5Q6ZNL6 1462 aa16.59■□□□□ 0.25
FAM193B-218ENST00000515394 ZNF608Q9ULD9 1512 aaPredicted RBP16.56■□□□□ 0.24
FAM193B-218ENST00000515394 RAD54L2Q9Y4B4 1467 aa16.56■□□□□ 0.24
FAM193B-218ENST00000515394 WRNQ14191 1432 aaPredicted RBP eCLIP16.56■□□□□ 0.24
FAM193B-218ENST00000515394 SOGA1O94964 1423 aa16.54■□□□□ 0.24
FAM193B-218ENST00000515394 TARBP1Q13395 1621 aaKnown RBP16.54■□□□□ 0.24
FAM193B-218ENST00000515394 SYNJ1O43426 1573 aa16.52■□□□□ 0.24
FAM193B-218ENST00000515394 TOP2BQ02880 1626 aa16.5■□□□□ 0.23
FAM193B-218ENST00000515394 BIVM-ERCC5R4GMW8 1640 aa16.49■□□□□ 0.23
FAM193B-218ENST00000515394 EIF4G3O43432 1585 aaKnown RBP16.49■□□□□ 0.23
FAM193B-218ENST00000515394 AQRO60306 1485 aaKnown RBP eCLIP16.48■□□□□ 0.23
FAM193B-218ENST00000515394 TDRD9Q8NDG6 1382 aaKnown RBP16.47■□□□□ 0.23
FAM193B-218ENST00000515394 AEBP2Q6ZN18 517 aaPredicted RBP16.42■□□□□ 0.22
FAM193B-218ENST00000515394 WDR97A6NE52 1622 aa16.41■□□□□ 0.22
FAM193B-218ENST00000515394 RIMBP3CA6NJZ7 1639 aa16.41■□□□□ 0.22
FAM193B-218ENST00000515394 RIMBP3BA6NNM3 1639 aa16.41■□□□□ 0.22
FAM193B-218ENST00000515394 RIMBP3Q9UFD9 1639 aa16.41■□□□□ 0.22
FAM193B-218ENST00000515394 ABCA10Q8WWZ4 1543 aa16.4■□□□□ 0.22
FAM193B-218ENST00000515394 GAPVD1Q14C86 1478 aa16.35■□□□□ 0.21
FAM193B-218ENST00000515394 GRIN2BQ13224 1484 aa16.34■□□□□ 0.21
FAM193B-218ENST00000515394 ABCA5Q8WWZ7 1642 aa16.34■□□□□ 0.21
FAM193B-218ENST00000515394 SNAPC4Q5SXM2 1469 aa16.33■□□□□ 0.2
FAM193B-218ENST00000515394 FBLN2P98095 1184 aa16.32■□□□□ 0.2
FAM193B-218ENST00000515394 PBRM1Q86U86 1689 aa16.32■□□□□ 0.2
FAM193B-218ENST00000515394 TRHP20396 242 aaPredicted RBP16.31■□□□□ 0.2
FAM193B-218ENST00000515394 MAGI1Q96QZ7 1491 aaPredicted RBP16.28■□□□□ 0.2
FAM193B-218ENST00000515394 CHD1O14646 1710 aa16.28■□□□□ 0.2
FAM193B-218ENST00000515394 CYB5RLQ6IPT4 315 aa16.27■□□□□ 0.2
FAM193B-218ENST00000515394 ARHGEF11O15085 1522 aa16.26■□□□□ 0.19
FAM193B-218ENST00000515394 CHMP7Q8WUX9 453 aaPredicted RBP16.25■□□□□ 0.19
FAM193B-218ENST00000515394 SYNJ2O15056 1496 aa16.22■□□□□ 0.19
FAM193B-218ENST00000515394 KIF27Q86VH2 1401 aa16.2■□□□□ 0.18
FAM193B-218ENST00000515394 ERICH3Q5RHP9 1530 aa16.19■□□□□ 0.18
FAM193B-218ENST00000515394 ADAMTS12P58397 1594 aa16.18■□□□□ 0.18
FAM193B-218ENST00000515394 FHAD1B1AJZ9 1412 aa16.16■□□□□ 0.18
FAM193B-218ENST00000515394 GRIN2AQ12879 1464 aa16.13■□□□□ 0.17
FAM193B-218ENST00000515394 IGF1RP08069 1367 aa16.12■□□□□ 0.17
FAM193B-218ENST00000515394 RUSC2Q8N2Y8 1516 aa16.1■□□□□ 0.17
FAM193B-218ENST00000515394 CUL7Q14999 1698 aa16.08■□□□□ 0.16
FAM193B-218ENST00000515394 CLASP1Q7Z460 1538 aa16.07■□□□□ 0.16
FAM193B-218ENST00000515394 ARAP1Q96P48 1450 aa16.06■□□□□ 0.16
FAM193B-218ENST00000515394 CHIC1Q5VXU3 224 aa16.06■□□□□ 0.16
FAM193B-218ENST00000515394 CEP170Q5SW79 1584 aa16.05■□□□□ 0.16
FAM193B-218ENST00000515394 CARMIL1Q5VZK9 1371 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms