RNA–Protein interactions for RNA: ENST00000515330.5

ALPK1-218, Transcript of alpha kinase 1, humanhuman

TSL 2

Gene ALPK1, Length 1,008 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK1-218ENST00000515330 NISCHQ9Y2I1 1504 aa43.49■■■■■ 4.55
ALPK1-218ENST00000515330 CCDC180Q9P1Z9 1646 aa38.56■■■■□ 3.76
ALPK1-218ENST00000515330 ABCC9O60706 1549 aa37.6■■■■□ 3.61
ALPK1-218ENST00000515330 ZCCHC6Q5VYS8 1495 aaKnown RBP36.3■■■■□ 3.4
ALPK1-218ENST00000515330 NACADO15069 1562 aa36.16■■■■□ 3.38
ALPK1-218ENST00000515330 RB1CC1Q8TDY2 1594 aa36.15■■■■□ 3.38
ALPK1-218ENST00000515330 DCAF8L2P0C7V8 631 aa36.09■■■■□ 3.37
ALPK1-218ENST00000515330 MYO15BQ96JP2 1530 aa36.01■■■■□ 3.36
ALPK1-218ENST00000515330 DCAF1Q9Y4B6 1507 aa35.95■■■■□ 3.35
ALPK1-218ENST00000515330 UNC13AQ9UPW8 1703 aa35.54■■■■□ 3.28
ALPK1-218ENST00000515330 BICRAQ9NZM4 1560 aa35.25■■■■□ 3.23
ALPK1-218ENST00000515330 SCRIBQ14160 1630 aa35.25■■■■□ 3.23
ALPK1-218ENST00000515330 PABPN1Q86U42 306 aaKnown RBP eCLIP35.15■■■■□ 3.22
ALPK1-218ENST00000515330 SHROOM4Q9ULL8 1493 aa34.66■■■■□ 3.14
ALPK1-218ENST00000515330 DNAJC5BQ9UF47 199 aa34.47■■■■□ 3.11
ALPK1-218ENST00000515330 EIF4G1Q04637 1599 aaKnown RBP34.2■■■■□ 3.07
ALPK1-218ENST00000515330 CC2D2AQ9P2K1 1620 aa34.04■■■■□ 3.04
ALPK1-218ENST00000515330 CECR2Q9BXF3 1484 aa33.95■■■■□ 3.03
ALPK1-218ENST00000515330 SMARCA4P51532 1647 aa33.73■■■□□ 2.99
ALPK1-218ENST00000515330 BAZ1AQ9NRL2 1556 aaPredicted RBP33.63■■■□□ 2.97
ALPK1-218ENST00000515330 MROH2BQ7Z745 1585 aa33.59■■■□□ 2.97
ALPK1-218ENST00000515330 ATAD2BQ9ULI0 1458 aa33.49■■■□□ 2.95
ALPK1-218ENST00000515330 NCAPD3P42695 1498 aa33.4■■■□□ 2.94
ALPK1-218ENST00000515330 PEG3Q9GZU2 1588 aa33.39■■■□□ 2.94
ALPK1-218ENST00000515330 SMARCA2P51531 1590 aa33.36■■■□□ 2.93
ALPK1-218ENST00000515330 HMGXB3Q12766 1538 aa33.27■■■□□ 2.92
ALPK1-218ENST00000515330 WIZO95785 1651 aa33.23■■■□□ 2.91
ALPK1-218ENST00000515330 RSF1Q96T23 1441 aaPredicted RBP33.22■■■□□ 2.91
ALPK1-218ENST00000515330 BAZ1BQ9UIG0 1483 aaKnown RBP33.15■■■□□ 2.9
ALPK1-218ENST00000515330 TOP2AP11388 1531 aaKnown RBP32.82■■■□□ 2.85
ALPK1-218ENST00000515330 NESP48681 1621 aa32.66■■■□□ 2.82
ALPK1-218ENST00000515330 LAMC3Q9Y6N6 1575 aa32.46■■■□□ 2.79
ALPK1-218ENST00000515330 CCDC88BA6NC98 1476 aa32.45■■■□□ 2.79
ALPK1-218ENST00000515330 CADPSQ9ULU8 1353 aa32.41■■■□□ 2.78
ALPK1-218ENST00000515330 SUPT5HO00267 1087 aaKnown RBP32.39■■■□□ 2.78
ALPK1-218ENST00000515330 CFTRP13569 1480 aa32.3■■■□□ 2.76
ALPK1-218ENST00000515330 KIF21AQ7Z4S6 1674 aa32.27■■■□□ 2.76
ALPK1-218ENST00000515330 ERCC6Q03468 1493 aa32.26■■■□□ 2.75
ALPK1-218ENST00000515330 PDS5BQ9NTI5 1447 aa32.17■■■□□ 2.74
ALPK1-218ENST00000515330 THOC2Q8NI27 1593 aaKnown RBP32.13■■■□□ 2.73
ALPK1-218ENST00000515330 PRDM2Q13029 1718 aa32.09■■■□□ 2.73
ALPK1-218ENST00000515330 FANCD2Q9BXW9 1451 aa32.07■■■□□ 2.72
ALPK1-218ENST00000515330 CEP164Q9UPV0 1460 aa31.97■■■□□ 2.71
ALPK1-218ENST00000515330 MRC2Q9UBG0 1479 aa31.91■■■□□ 2.7
ALPK1-218ENST00000515330 CUX2O14529 1486 aa31.9■■■□□ 2.7
ALPK1-218ENST00000515330 WDR62O43379 1518 aa31.86■■■□□ 2.69
ALPK1-218ENST00000515330 URB2Q14146 1524 aaKnown RBP31.82■■■□□ 2.68
ALPK1-218ENST00000515330 TOPBP1Q92547 1522 aa31.61■■■□□ 2.65
ALPK1-218ENST00000515330 DNMBPQ6XZF7 1577 aa31.56■■■□□ 2.64
ALPK1-218ENST00000515330 CUX1P39880 1505 aa31.49■■■□□ 2.63
ALPK1-218ENST00000515330 ABCC8Q09428 1581 aa31.44■■■□□ 2.62
ALPK1-218ENST00000515330 POLA1P09884 1462 aaPredicted RBP31.36■■■□□ 2.61
ALPK1-218ENST00000515330 TARBP1Q13395 1621 aaKnown RBP31.31■■■□□ 2.6
ALPK1-218ENST00000515330 FGD5Q6ZNL6 1462 aa31.3■■■□□ 2.6
ALPK1-218ENST00000515330 SYNJ1O43426 1573 aa31.29■■■□□ 2.6
ALPK1-218ENST00000515330 IFT140Q96RY7 1462 aa31.28■■■□□ 2.6
ALPK1-218ENST00000515330 ZNF608Q9ULD9 1512 aaPredicted RBP31.27■■■□□ 2.6
ALPK1-218ENST00000515330 RAD54L2Q9Y4B4 1467 aa31.25■■■□□ 2.59
ALPK1-218ENST00000515330 WRNQ14191 1432 aaPredicted RBP eCLIP31.24■■■□□ 2.59
ALPK1-218ENST00000515330 BIVM-ERCC5R4GMW8 1640 aa31.23■■■□□ 2.59
ALPK1-218ENST00000515330 TOP2BQ02880 1626 aa31.2■■■□□ 2.59
ALPK1-218ENST00000515330 SOGA1O94964 1423 aa31.15■■■□□ 2.58
ALPK1-218ENST00000515330 EIF4G3O43432 1585 aaKnown RBP31.12■■■□□ 2.57
ALPK1-218ENST00000515330 WDR97A6NE52 1622 aa31.12■■■□□ 2.57
ALPK1-218ENST00000515330 AQRO60306 1485 aaKnown RBP eCLIP31.07■■■□□ 2.56
ALPK1-218ENST00000515330 TDRD9Q8NDG6 1382 aaKnown RBP31.01■■■□□ 2.55
ALPK1-218ENST00000515330 ABCA10Q8WWZ4 1543 aa30.98■■■□□ 2.55
ALPK1-218ENST00000515330 ABCA5Q8WWZ7 1642 aa30.91■■■□□ 2.54
ALPK1-218ENST00000515330 PBRM1Q86U86 1689 aa30.81■■■□□ 2.52
ALPK1-218ENST00000515330 GAPVD1Q14C86 1478 aa30.81■■■□□ 2.52
ALPK1-218ENST00000515330 SNAPC4Q5SXM2 1469 aa30.77■■■□□ 2.52
ALPK1-218ENST00000515330 GRIN2BQ13224 1484 aa30.76■■■□□ 2.52
ALPK1-218ENST00000515330 DNAJC5Q9H3Z4 198 aa30.73■■■□□ 2.51
ALPK1-218ENST00000515330 CHD1O14646 1710 aa30.71■■■□□ 2.51
ALPK1-218ENST00000515330 MAGI1Q96QZ7 1491 aaPredicted RBP30.66■■■□□ 2.5
ALPK1-218ENST00000515330 ADAMTS12P58397 1594 aa30.58■■■□□ 2.49
ALPK1-218ENST00000515330 ERICH3Q5RHP9 1530 aa30.58■■■□□ 2.49
ALPK1-218ENST00000515330 SYNJ2O15056 1496 aa30.56■■■□□ 2.48
ALPK1-218ENST00000515330 OSCARQ8IYS5 282 aa30.53■■■□□ 2.48
ALPK1-218ENST00000515330 KIF27Q86VH2 1401 aa30.51■■■□□ 2.47
ALPK1-218ENST00000515330 RUSC2Q8N2Y8 1516 aa30.51■■■□□ 2.47
ALPK1-218ENST00000515330 TRIM41Q8WV44 630 aa30.5■■■□□ 2.47
ALPK1-218ENST00000515330 FBLN2P98095 1184 aa30.49■■■□□ 2.47
ALPK1-218ENST00000515330 IGF1RP08069 1367 aa30.46■■■□□ 2.47
ALPK1-218ENST00000515330 FHAD1B1AJZ9 1412 aa30.44■■■□□ 2.46
ALPK1-218ENST00000515330 CHMP7Q8WUX9 453 aaPredicted RBP30.42■■■□□ 2.46
ALPK1-218ENST00000515330 GRIN2AQ12879 1464 aa30.42■■■□□ 2.46
ALPK1-218ENST00000515330 CLASP1Q7Z460 1538 aa30.39■■■□□ 2.46
ALPK1-218ENST00000515330 CHIC1Q5VXU3 224 aa30.39■■■□□ 2.46
ALPK1-218ENST00000515330 CEP170Q5SW79 1584 aa30.34■■■□□ 2.45
ALPK1-218ENST00000515330 CUL7Q14999 1698 aa30.33■■■□□ 2.45
ALPK1-218ENST00000515330 NUP160Q12769 1436 aa30.3■■■□□ 2.44
ALPK1-218ENST00000515330 CARMIL1Q5VZK9 1371 aa30.23■■■□□ 2.43
ALPK1-218ENST00000515330 RIMBP3CA6NJZ7 1639 aa30.21■■■□□ 2.43
ALPK1-218ENST00000515330 RIMBP3BA6NNM3 1639 aa30.21■■■□□ 2.43
ALPK1-218ENST00000515330 RIMBP3Q9UFD9 1639 aa30.21■■■□□ 2.43
ALPK1-218ENST00000515330 ARHGEF11O15085 1522 aa30.2■■■□□ 2.42
ALPK1-218ENST00000515330 SHROOM2Q13796 1616 aa30.09■■■□□ 2.41
ALPK1-218ENST00000515330 PRXQ9BXM0 1461 aa30.09■■■□□ 2.41
ALPK1-218ENST00000515330 ERCC6L2Q5T890 1561 aa30.07■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms