RNA–Protein interactions for RNA: ENST00000515282.5

LINC00499-204, long intergenic non-protein coding RNA 499, humanhuman

TSL 5 BASIC

Gene LINC00499, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00499-204ENST00000515282 NISCHQ9Y2I1 1504 aa21.63■■□□□ 1.05
LINC00499-204ENST00000515282 ABCC9O60706 1549 aa19.31■□□□□ 0.68
LINC00499-204ENST00000515282 CCDC180Q9P1Z9 1646 aa19.29■□□□□ 0.68
LINC00499-204ENST00000515282 RB1CC1Q8TDY2 1594 aa18.34■□□□□ 0.53
LINC00499-204ENST00000515282 DCAF8L2P0C7V8 631 aa18.27■□□□□ 0.52
LINC00499-204ENST00000515282 NACADO15069 1562 aa18.21■□□□□ 0.51
LINC00499-204ENST00000515282 PABPN1Q86U42 306 aaKnown RBP eCLIP18.02■□□□□ 0.48
LINC00499-204ENST00000515282 DNAJC5BQ9UF47 199 aa18.01■□□□□ 0.47
LINC00499-204ENST00000515282 ZCCHC6Q5VYS8 1495 aaKnown RBP17.98■□□□□ 0.47
LINC00499-204ENST00000515282 MYO15BQ96JP2 1530 aa17.98■□□□□ 0.47
LINC00499-204ENST00000515282 UNC13AQ9UPW8 1703 aa17.91■□□□□ 0.46
LINC00499-204ENST00000515282 BICRAQ9NZM4 1560 aa17.84■□□□□ 0.45
LINC00499-204ENST00000515282 DCAF1Q9Y4B6 1507 aa17.81■□□□□ 0.44
LINC00499-204ENST00000515282 SCRIBQ14160 1630 aa17.72■□□□□ 0.43
LINC00499-204ENST00000515282 SHROOM4Q9ULL8 1493 aa17.51■□□□□ 0.39
LINC00499-204ENST00000515282 CC2D2AQ9P2K1 1620 aa17.39■□□□□ 0.38
LINC00499-204ENST00000515282 EIF4G1Q04637 1599 aaKnown RBP17.39■□□□□ 0.37
LINC00499-204ENST00000515282 CECR2Q9BXF3 1484 aa17.35■□□□□ 0.37
LINC00499-204ENST00000515282 SMARCA4P51532 1647 aa16.85■□□□□ 0.29
LINC00499-204ENST00000515282 ATAD2BQ9ULI0 1458 aa16.85■□□□□ 0.29
LINC00499-204ENST00000515282 NCAPD3P42695 1498 aa16.84■□□□□ 0.29
LINC00499-204ENST00000515282 BAZ1AQ9NRL2 1556 aaPredicted RBP16.77■□□□□ 0.27
LINC00499-204ENST00000515282 SMARCA2P51531 1590 aa16.76■□□□□ 0.27
LINC00499-204ENST00000515282 HMGXB3Q12766 1538 aa16.73■□□□□ 0.27
LINC00499-204ENST00000515282 MROH2BQ7Z745 1585 aa16.72■□□□□ 0.27
LINC00499-204ENST00000515282 BAZ1BQ9UIG0 1483 aaKnown RBP16.7■□□□□ 0.26
LINC00499-204ENST00000515282 PEG3Q9GZU2 1588 aa16.64■□□□□ 0.25
LINC00499-204ENST00000515282 NESP48681 1621 aa16.63■□□□□ 0.25
LINC00499-204ENST00000515282 ERCC6Q03468 1493 aa16.63■□□□□ 0.25
LINC00499-204ENST00000515282 WIZO95785 1651 aa16.51■□□□□ 0.23
LINC00499-204ENST00000515282 CUX2O14529 1486 aa16.5■□□□□ 0.23
LINC00499-204ENST00000515282 LAMC3Q9Y6N6 1575 aa16.43■□□□□ 0.22
LINC00499-204ENST00000515282 RSF1Q96T23 1441 aaPredicted RBP16.4■□□□□ 0.22
LINC00499-204ENST00000515282 THOC2Q8NI27 1593 aaKnown RBP16.39■□□□□ 0.21
LINC00499-204ENST00000515282 DNAJC5Q9H3Z4 198 aa16.36■□□□□ 0.21
LINC00499-204ENST00000515282 KIF21AQ7Z4S6 1674 aa16.36■□□□□ 0.21
LINC00499-204ENST00000515282 CADPSQ9ULU8 1353 aa16.36■□□□□ 0.21
LINC00499-204ENST00000515282 PDS5BQ9NTI5 1447 aa16.34■□□□□ 0.21
LINC00499-204ENST00000515282 TOP2AP11388 1531 aaKnown RBP16.29■□□□□ 0.2
LINC00499-204ENST00000515282 MRC2Q9UBG0 1479 aa16.23■□□□□ 0.19
LINC00499-204ENST00000515282 FANCD2Q9BXW9 1451 aa16.2■□□□□ 0.18
LINC00499-204ENST00000515282 CFTRP13569 1480 aa16.19■□□□□ 0.18
LINC00499-204ENST00000515282 CEP164Q9UPV0 1460 aa16.19■□□□□ 0.18
LINC00499-204ENST00000515282 WDR62O43379 1518 aa16.18■□□□□ 0.18
LINC00499-204ENST00000515282 CCDC88BA6NC98 1476 aa16.12■□□□□ 0.17
LINC00499-204ENST00000515282 URB2Q14146 1524 aaKnown RBP16.08■□□□□ 0.16
LINC00499-204ENST00000515282 PRDM2Q13029 1718 aa15.96■□□□□ 0.15
LINC00499-204ENST00000515282 TOPBP1Q92547 1522 aa15.9■□□□□ 0.14
LINC00499-204ENST00000515282 ZNF608Q9ULD9 1512 aaPredicted RBP15.88■□□□□ 0.13
LINC00499-204ENST00000515282 IFT140Q96RY7 1462 aa15.84■□□□□ 0.13
LINC00499-204ENST00000515282 DNMBPQ6XZF7 1577 aa15.83■□□□□ 0.13
LINC00499-204ENST00000515282 SUPT5HO00267 1087 aaKnown RBP15.82■□□□□ 0.12
LINC00499-204ENST00000515282 TRIM41Q8WV44 630 aa15.79■□□□□ 0.12
LINC00499-204ENST00000515282 ABCC8Q09428 1581 aa15.78■□□□□ 0.12
LINC00499-204ENST00000515282 EIF4G3O43432 1585 aaKnown RBP15.77■□□□□ 0.11
LINC00499-204ENST00000515282 OSCARQ8IYS5 282 aa15.76■□□□□ 0.11
LINC00499-204ENST00000515282 POLA1P09884 1462 aaPredicted RBP15.76■□□□□ 0.11
LINC00499-204ENST00000515282 RAD54L2Q9Y4B4 1467 aa15.74■□□□□ 0.11
LINC00499-204ENST00000515282 AQRO60306 1485 aaKnown RBP eCLIP15.73■□□□□ 0.11
LINC00499-204ENST00000515282 TARBP1Q13395 1621 aaKnown RBP15.73■□□□□ 0.11
LINC00499-204ENST00000515282 AEBP2Q6ZN18 517 aaPredicted RBP15.72■□□□□ 0.11
LINC00499-204ENST00000515282 CUX1P39880 1505 aa15.69■□□□□ 0.1
LINC00499-204ENST00000515282 FGD5Q6ZNL6 1462 aa15.69■□□□□ 0.1
LINC00499-204ENST00000515282 TDRD9Q8NDG6 1382 aaKnown RBP15.67■□□□□ 0.1
LINC00499-204ENST00000515282 SOGA1O94964 1423 aa15.67■□□□□ 0.1
LINC00499-204ENST00000515282 FBLN2P98095 1184 aa15.61■□□□□ 0.09
LINC00499-204ENST00000515282 RIMBP3CA6NJZ7 1639 aa15.59■□□□□ 0.09
LINC00499-204ENST00000515282 RIMBP3BA6NNM3 1639 aa15.59■□□□□ 0.09
LINC00499-204ENST00000515282 RIMBP3Q9UFD9 1639 aa15.59■□□□□ 0.09
LINC00499-204ENST00000515282 CHD1O14646 1710 aa15.59■□□□□ 0.09
LINC00499-204ENST00000515282 SNAPC4Q5SXM2 1469 aa15.59■□□□□ 0.09
LINC00499-204ENST00000515282 ARHGEF11O15085 1522 aa15.57■□□□□ 0.08
LINC00499-204ENST00000515282 WDR97A6NE52 1622 aa15.52■□□□□ 0.08
LINC00499-204ENST00000515282 GRIN2BQ13224 1484 aa15.51■□□□□ 0.07
LINC00499-204ENST00000515282 MAGI1Q96QZ7 1491 aaPredicted RBP15.48■□□□□ 0.07
LINC00499-204ENST00000515282 SYNJ1O43426 1573 aa15.48■□□□□ 0.07
LINC00499-204ENST00000515282 ABCA10Q8WWZ4 1543 aa15.48■□□□□ 0.07
LINC00499-204ENST00000515282 GAPVD1Q14C86 1478 aa15.47■□□□□ 0.07
LINC00499-204ENST00000515282 WRNQ14191 1432 aaPredicted RBP eCLIP15.47■□□□□ 0.07
LINC00499-204ENST00000515282 CHMP7Q8WUX9 453 aaPredicted RBP15.47■□□□□ 0.07
LINC00499-204ENST00000515282 CYB5RLQ6IPT4 315 aa15.45■□□□□ 0.06
LINC00499-204ENST00000515282 ABCA5Q8WWZ7 1642 aa15.45■□□□□ 0.06
LINC00499-204ENST00000515282 SYNJ2O15056 1496 aa15.45■□□□□ 0.06
LINC00499-204ENST00000515282 ARAP1Q96P48 1450 aa15.45■□□□□ 0.06
LINC00499-204ENST00000515282 PBRM1Q86U86 1689 aa15.44■□□□□ 0.06
LINC00499-204ENST00000515282 CLASP1Q7Z460 1538 aa15.43■□□□□ 0.06
LINC00499-204ENST00000515282 TOP2BQ02880 1626 aa15.43■□□□□ 0.06
LINC00499-204ENST00000515282 BIVM-ERCC5R4GMW8 1640 aa15.42■□□□□ 0.06
LINC00499-204ENST00000515282 ADAMTS12P58397 1594 aa15.35■□□□□ 0.05
LINC00499-204ENST00000515282 GRIN2AQ12879 1464 aa15.33■□□□□ 0.04
LINC00499-204ENST00000515282 CEP170Q5SW79 1584 aa15.29■□□□□ 0.04
LINC00499-204ENST00000515282 FHAD1B1AJZ9 1412 aa15.28■□□□□ 0.04
LINC00499-204ENST00000515282 ERCC6L2Q5T890 1561 aa15.27■□□□□ 0.03
LINC00499-204ENST00000515282 ERICH3Q5RHP9 1530 aa15.26■□□□□ 0.03
LINC00499-204ENST00000515282 NUP160Q12769 1436 aa15.26■□□□□ 0.03
LINC00499-204ENST00000515282 TRHP20396 242 aaPredicted RBP15.25■□□□□ 0.03
LINC00499-204ENST00000515282 SHROOM2Q13796 1616 aa15.15■□□□□ 0.02
LINC00499-204ENST00000515282 KIF27Q86VH2 1401 aa15.14■□□□□ 0.01
LINC00499-204ENST00000515282 IGF1RP08069 1367 aa15.13■□□□□ 0.01
LINC00499-204ENST00000515282 RUSC2Q8N2Y8 1516 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms