RNA–Protein interactions for RNA: ENST00000515241.1

MARCH3-205, Transcript of membrane associated ring-CH-type finger 3, humanhuman

TSL 2 BASIC

Gene MARCH3, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARCH3-205ENST00000515241 NISCHQ9Y2I1 1504 aa28.08■■■□□ 2.09
MARCH3-205ENST00000515241 CCDC180Q9P1Z9 1646 aa25.11■■□□□ 1.61
MARCH3-205ENST00000515241 ABCC9O60706 1549 aa25.03■■□□□ 1.6
MARCH3-205ENST00000515241 RB1CC1Q8TDY2 1594 aa23.87■■□□□ 1.41
MARCH3-205ENST00000515241 DCAF8L2P0C7V8 631 aa23.77■■□□□ 1.4
MARCH3-205ENST00000515241 NACADO15069 1562 aa23.73■■□□□ 1.39
MARCH3-205ENST00000515241 MYO15BQ96JP2 1530 aa23.42■■□□□ 1.34
MARCH3-205ENST00000515241 PABPN1Q86U42 306 aaKnown RBP eCLIP23.35■■□□□ 1.33
MARCH3-205ENST00000515241 ZCCHC6Q5VYS8 1495 aaKnown RBP23.3■■□□□ 1.32
MARCH3-205ENST00000515241 DNAJC5BQ9UF47 199 aa23.29■■□□□ 1.32
MARCH3-205ENST00000515241 UNC13AQ9UPW8 1703 aa23.24■■□□□ 1.31
MARCH3-205ENST00000515241 DCAF1Q9Y4B6 1507 aa23.18■■□□□ 1.3
MARCH3-205ENST00000515241 BICRAQ9NZM4 1560 aa23.1■■□□□ 1.29
MARCH3-205ENST00000515241 SCRIBQ14160 1630 aa22.94■■□□□ 1.26
MARCH3-205ENST00000515241 SHROOM4Q9ULL8 1493 aa22.85■■□□□ 1.25
MARCH3-205ENST00000515241 CC2D2AQ9P2K1 1620 aa22.57■■□□□ 1.2
MARCH3-205ENST00000515241 EIF4G1Q04637 1599 aaKnown RBP22.57■■□□□ 1.2
MARCH3-205ENST00000515241 CECR2Q9BXF3 1484 aa22.53■■□□□ 1.2
MARCH3-205ENST00000515241 NCAPD3P42695 1498 aa21.9■■□□□ 1.1
MARCH3-205ENST00000515241 SMARCA4P51532 1647 aa21.87■■□□□ 1.09
MARCH3-205ENST00000515241 ATAD2BQ9ULI0 1458 aa21.86■■□□□ 1.09
MARCH3-205ENST00000515241 SMARCA2P51531 1590 aa21.82■■□□□ 1.08
MARCH3-205ENST00000515241 BAZ1AQ9NRL2 1556 aaPredicted RBP21.81■■□□□ 1.08
MARCH3-205ENST00000515241 HMGXB3Q12766 1538 aa21.75■■□□□ 1.07
MARCH3-205ENST00000515241 BAZ1BQ9UIG0 1483 aaKnown RBP21.7■■□□□ 1.06
MARCH3-205ENST00000515241 ERCC6Q03468 1493 aa21.64■■□□□ 1.06
MARCH3-205ENST00000515241 MROH2BQ7Z745 1585 aa21.64■■□□□ 1.05
MARCH3-205ENST00000515241 PEG3Q9GZU2 1588 aa21.62■■□□□ 1.05
MARCH3-205ENST00000515241 NESP48681 1621 aa21.51■■□□□ 1.03
MARCH3-205ENST00000515241 CUX2O14529 1486 aa21.49■■□□□ 1.03
MARCH3-205ENST00000515241 LAMC3Q9Y6N6 1575 aa21.39■■□□□ 1.01
MARCH3-205ENST00000515241 WIZO95785 1651 aa21.38■■□□□ 1.01
MARCH3-205ENST00000515241 PDS5BQ9NTI5 1447 aa21.3■■□□□ 1
MARCH3-205ENST00000515241 DNAJC5Q9H3Z4 198 aa21.3■■□□□ 1
MARCH3-205ENST00000515241 CADPSQ9ULU8 1353 aa21.27■■□□□ 1
MARCH3-205ENST00000515241 RSF1Q96T23 1441 aaPredicted RBP21.26■□□□□ 0.99
MARCH3-205ENST00000515241 THOC2Q8NI27 1593 aaKnown RBP21.23■□□□□ 0.99
MARCH3-205ENST00000515241 KIF21AQ7Z4S6 1674 aa21.21■□□□□ 0.99
MARCH3-205ENST00000515241 TOP2AP11388 1531 aaKnown RBP21.14■□□□□ 0.98
MARCH3-205ENST00000515241 MRC2Q9UBG0 1479 aa21.09■□□□□ 0.97
MARCH3-205ENST00000515241 CEP164Q9UPV0 1460 aa21.05■□□□□ 0.96
MARCH3-205ENST00000515241 CFTRP13569 1480 aa21.04■□□□□ 0.96
MARCH3-205ENST00000515241 FANCD2Q9BXW9 1451 aa21.04■□□□□ 0.96
MARCH3-205ENST00000515241 WDR62O43379 1518 aa21■□□□□ 0.95
MARCH3-205ENST00000515241 CCDC88BA6NC98 1476 aa20.9■□□□□ 0.94
MARCH3-205ENST00000515241 URB2Q14146 1524 aaKnown RBP20.82■□□□□ 0.92
MARCH3-205ENST00000515241 PRDM2Q13029 1718 aa20.79■□□□□ 0.92
MARCH3-205ENST00000515241 TOPBP1Q92547 1522 aa20.64■□□□□ 0.9
MARCH3-205ENST00000515241 ABCC8Q09428 1581 aa20.62■□□□□ 0.89
MARCH3-205ENST00000515241 IFT140Q96RY7 1462 aa20.62■□□□□ 0.89
MARCH3-205ENST00000515241 DNMBPQ6XZF7 1577 aa20.57■□□□□ 0.88
MARCH3-205ENST00000515241 OSCARQ8IYS5 282 aa20.57■□□□□ 0.88
MARCH3-205ENST00000515241 ZNF608Q9ULD9 1512 aaPredicted RBP20.55■□□□□ 0.88
MARCH3-205ENST00000515241 SUPT5HO00267 1087 aaKnown RBP20.53■□□□□ 0.88
MARCH3-205ENST00000515241 TRIM41Q8WV44 630 aa20.52■□□□□ 0.88
MARCH3-205ENST00000515241 EIF4G3O43432 1585 aaKnown RBP20.44■□□□□ 0.86
MARCH3-205ENST00000515241 POLA1P09884 1462 aaPredicted RBP20.43■□□□□ 0.86
MARCH3-205ENST00000515241 AQRO60306 1485 aaKnown RBP eCLIP20.41■□□□□ 0.863e-7■■■■■ 30.5
MARCH3-205ENST00000515241 TARBP1Q13395 1621 aaKnown RBP20.4■□□□□ 0.86
MARCH3-205ENST00000515241 RAD54L2Q9Y4B4 1467 aa20.37■□□□□ 0.85
MARCH3-205ENST00000515241 SOGA1O94964 1423 aa20.37■□□□□ 0.85
MARCH3-205ENST00000515241 FGD5Q6ZNL6 1462 aa20.34■□□□□ 0.85
MARCH3-205ENST00000515241 FBLN2P98095 1184 aa20.33■□□□□ 0.85
MARCH3-205ENST00000515241 TDRD9Q8NDG6 1382 aaKnown RBP20.33■□□□□ 0.84
MARCH3-205ENST00000515241 CUX1P39880 1505 aa20.32■□□□□ 0.84
MARCH3-205ENST00000515241 CHD1O14646 1710 aa20.24■□□□□ 0.83
MARCH3-205ENST00000515241 RIMBP3CA6NJZ7 1639 aa20.23■□□□□ 0.83
MARCH3-205ENST00000515241 RIMBP3BA6NNM3 1639 aa20.23■□□□□ 0.83
MARCH3-205ENST00000515241 RIMBP3Q9UFD9 1639 aa20.23■□□□□ 0.83
MARCH3-205ENST00000515241 WDR97A6NE52 1622 aa20.22■□□□□ 0.83
MARCH3-205ENST00000515241 SNAPC4Q5SXM2 1469 aa20.21■□□□□ 0.83
MARCH3-205ENST00000515241 ARHGEF11O15085 1522 aa20.21■□□□□ 0.83
MARCH3-205ENST00000515241 CHMP7Q8WUX9 453 aaPredicted RBP20.17■□□□□ 0.82
MARCH3-205ENST00000515241 GRIN2BQ13224 1484 aa20.17■□□□□ 0.82
MARCH3-205ENST00000515241 MAGI1Q96QZ7 1491 aaPredicted RBP20.15■□□□□ 0.82
MARCH3-205ENST00000515241 GAPVD1Q14C86 1478 aa20.12■□□□□ 0.81
MARCH3-205ENST00000515241 ABCA10Q8WWZ4 1543 aa20.11■□□□□ 0.81
MARCH3-205ENST00000515241 WRNQ14191 1432 aaPredicted RBP eCLIP20.1■□□□□ 0.81
MARCH3-205ENST00000515241 CYB5RLQ6IPT4 315 aa20.1■□□□□ 0.81
MARCH3-205ENST00000515241 SYNJ2O15056 1496 aa20.08■□□□□ 0.81
MARCH3-205ENST00000515241 SYNJ1O43426 1573 aa20.06■□□□□ 0.8
MARCH3-205ENST00000515241 PBRM1Q86U86 1689 aa20.06■□□□□ 0.8
MARCH3-205ENST00000515241 TOP2BQ02880 1626 aa20.04■□□□□ 0.8
MARCH3-205ENST00000515241 ABCA5Q8WWZ7 1642 aa20.04■□□□□ 0.8
MARCH3-205ENST00000515241 BIVM-ERCC5R4GMW8 1640 aa20.02■□□□□ 0.79
MARCH3-205ENST00000515241 CLASP1Q7Z460 1538 aa20.02■□□□□ 0.79
MARCH3-205ENST00000515241 ARAP1Q96P48 1450 aa20.01■□□□□ 0.79
MARCH3-205ENST00000515241 GRIN2AQ12879 1464 aa19.91■□□□□ 0.78
MARCH3-205ENST00000515241 ADAMTS12P58397 1594 aa19.9■□□□□ 0.78
MARCH3-205ENST00000515241 FHAD1B1AJZ9 1412 aa19.87■□□□□ 0.77
MARCH3-205ENST00000515241 TRHP20396 242 aaPredicted RBP19.87■□□□□ 0.77
MARCH3-205ENST00000515241 ERICH3Q5RHP9 1530 aa19.86■□□□□ 0.77
MARCH3-205ENST00000515241 NUP160Q12769 1436 aa19.81■□□□□ 0.76
MARCH3-205ENST00000515241 CEP170Q5SW79 1584 aa19.8■□□□□ 0.76
MARCH3-205ENST00000515241 ERCC6L2Q5T890 1561 aa19.71■□□□□ 0.75
MARCH3-205ENST00000515241 KIF27Q86VH2 1401 aa19.71■□□□□ 0.75
MARCH3-205ENST00000515241 SHROOM2Q13796 1616 aa19.68■□□□□ 0.74
MARCH3-205ENST00000515241 PRG4Q92954 1404 aaPredicted RBP19.66■□□□□ 0.74
MARCH3-205ENST00000515241 JPH4Q96JJ6 628 aa19.65■□□□□ 0.74
MARCH3-205ENST00000515241 IGF1RP08069 1367 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms