RNA–Protein interactions for RNA: ENST00000515229.5

SH3TC2-214, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 3

Gene SH3TC2, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-214ENST00000515229 NISCHQ9Y2I1 1504 aa19.65■□□□□ 0.74
SH3TC2-214ENST00000515229 CCDC180Q9P1Z9 1646 aa17.47■□□□□ 0.39
SH3TC2-214ENST00000515229 ABCC9O60706 1549 aa17.11■□□□□ 0.33
SH3TC2-214ENST00000515229 DCAF8L2P0C7V8 631 aa16.52■□□□□ 0.24
SH3TC2-214ENST00000515229 RB1CC1Q8TDY2 1594 aa16.45■□□□□ 0.22
SH3TC2-214ENST00000515229 NACADO15069 1562 aa16.42■□□□□ 0.22
SH3TC2-214ENST00000515229 ZCCHC6Q5VYS8 1495 aaKnown RBP16.37■□□□□ 0.21
SH3TC2-214ENST00000515229 MYO15BQ96JP2 1530 aa16.27■□□□□ 0.2
SH3TC2-214ENST00000515229 DCAF1Q9Y4B6 1507 aa16.23■□□□□ 0.19
SH3TC2-214ENST00000515229 UNC13AQ9UPW8 1703 aa16.06■□□□□ 0.16
SH3TC2-214ENST00000515229 PABPN1Q86U42 306 aaKnown RBP eCLIP16■□□□□ 0.15
SH3TC2-214ENST00000515229 SCRIBQ14160 1630 aa15.97■□□□□ 0.15
SH3TC2-214ENST00000515229 BICRAQ9NZM4 1560 aa15.9■□□□□ 0.14
SH3TC2-214ENST00000515229 SHROOM4Q9ULL8 1493 aa15.74■□□□□ 0.11
SH3TC2-214ENST00000515229 DNAJC5BQ9UF47 199 aa15.62■□□□□ 0.09
SH3TC2-214ENST00000515229 EIF4G1Q04637 1599 aaKnown RBP15.52■□□□□ 0.07
SH3TC2-214ENST00000515229 CC2D2AQ9P2K1 1620 aa15.46■□□□□ 0.06
SH3TC2-214ENST00000515229 CECR2Q9BXF3 1484 aa15.36■□□□□ 0.05
SH3TC2-214ENST00000515229 SMARCA4P51532 1647 aa15.25■□□□□ 0.03
SH3TC2-214ENST00000515229 BAZ1AQ9NRL2 1556 aaPredicted RBP15.25■□□□□ 0.03
SH3TC2-214ENST00000515229 SMARCA2P51531 1590 aa15.15■□□□□ 0.02
SH3TC2-214ENST00000515229 ATAD2BQ9ULI0 1458 aa15.15■□□□□ 0.02
SH3TC2-214ENST00000515229 MROH2BQ7Z745 1585 aa15.14■□□□□ 0.01
SH3TC2-214ENST00000515229 NCAPD3P42695 1498 aa15.13■□□□□ 0.01
SH3TC2-214ENST00000515229 BAZ1BQ9UIG0 1483 aaKnown RBP15.07■□□□□ 0
SH3TC2-214ENST00000515229 HMGXB3Q12766 1538 aa15.07■□□□□ 0
SH3TC2-214ENST00000515229 PEG3Q9GZU2 1588 aa15.07■□□□□ 0
SH3TC2-214ENST00000515229 WIZO95785 1651 aa15□□□□□ -0.01
SH3TC2-214ENST00000515229 RSF1Q96T23 1441 aaPredicted RBP14.97□□□□□ -0.01
SH3TC2-214ENST00000515229 TOP2AP11388 1531 aaKnown RBP14.84□□□□□ -0.03
SH3TC2-214ENST00000515229 NESP48681 1621 aa14.79□□□□□ -0.04
SH3TC2-214ENST00000515229 ERCC6Q03468 1493 aa14.77□□□□□ -0.04
SH3TC2-214ENST00000515229 LAMC3Q9Y6N6 1575 aa14.75□□□□□ -0.05
SH3TC2-214ENST00000515229 CADPSQ9ULU8 1353 aa14.71□□□□□ -0.06
SH3TC2-214ENST00000515229 SUPT5HO00267 1087 aaKnown RBP14.7□□□□□ -0.06
SH3TC2-214ENST00000515229 PDS5BQ9NTI5 1447 aa14.67□□□□□ -0.06
SH3TC2-214ENST00000515229 CCDC88BA6NC98 1476 aa14.65□□□□□ -0.06
SH3TC2-214ENST00000515229 KIF21AQ7Z4S6 1674 aa14.63□□□□□ -0.07
SH3TC2-214ENST00000515229 CFTRP13569 1480 aa14.61□□□□□ -0.07
SH3TC2-214ENST00000515229 CUX2O14529 1486 aa14.56□□□□□ -0.08
SH3TC2-214ENST00000515229 FANCD2Q9BXW9 1451 aa14.56□□□□□ -0.08
SH3TC2-214ENST00000515229 CEP164Q9UPV0 1460 aa14.56□□□□□ -0.08
SH3TC2-214ENST00000515229 THOC2Q8NI27 1593 aaKnown RBP14.55□□□□□ -0.08
SH3TC2-214ENST00000515229 PRDM2Q13029 1718 aa14.54□□□□□ -0.08
SH3TC2-214ENST00000515229 MRC2Q9UBG0 1479 aa14.51□□□□□ -0.09
SH3TC2-214ENST00000515229 WDR62O43379 1518 aa14.45□□□□□ -0.1
SH3TC2-214ENST00000515229 URB2Q14146 1524 aaKnown RBP14.39□□□□□ -0.11
SH3TC2-214ENST00000515229 ABCC8Q09428 1581 aa14.33□□□□□ -0.12
SH3TC2-214ENST00000515229 TOPBP1Q92547 1522 aa14.31□□□□□ -0.12
SH3TC2-214ENST00000515229 DNMBPQ6XZF7 1577 aa14.3□□□□□ -0.12
SH3TC2-214ENST00000515229 IFT140Q96RY7 1462 aa14.23□□□□□ -0.13
SH3TC2-214ENST00000515229 CUX1P39880 1505 aa14.2□□□□□ -0.14
SH3TC2-214ENST00000515229 POLA1P09884 1462 aaPredicted RBP14.19□□□□□ -0.14
SH3TC2-214ENST00000515229 FGD5Q6ZNL6 1462 aa14.18□□□□□ -0.14
SH3TC2-214ENST00000515229 SOGA1O94964 1423 aa14.15□□□□□ -0.14
SH3TC2-214ENST00000515229 RAD54L2Q9Y4B4 1467 aa14.15□□□□□ -0.14
SH3TC2-214ENST00000515229 ZNF608Q9ULD9 1512 aaPredicted RBP14.15□□□□□ -0.14
SH3TC2-214ENST00000515229 WRNQ14191 1432 aaPredicted RBP eCLIP14.15□□□□□ -0.14
SH3TC2-214ENST00000515229 TARBP1Q13395 1621 aaKnown RBP14.14□□□□□ -0.15
SH3TC2-214ENST00000515229 EIF4G3O43432 1585 aaKnown RBP14.12□□□□□ -0.15
SH3TC2-214ENST00000515229 SYNJ1O43426 1573 aa14.1□□□□□ -0.15
SH3TC2-214ENST00000515229 TOP2BQ02880 1626 aa14.1□□□□□ -0.15
SH3TC2-214ENST00000515229 BIVM-ERCC5R4GMW8 1640 aa14.09□□□□□ -0.15
SH3TC2-214ENST00000515229 AQRO60306 1485 aaKnown RBP eCLIP14.09□□□□□ -0.15
SH3TC2-214ENST00000515229 DNAJC5Q9H3Z4 198 aa14.07□□□□□ -0.16
SH3TC2-214ENST00000515229 TDRD9Q8NDG6 1382 aaKnown RBP14.07□□□□□ -0.16
SH3TC2-214ENST00000515229 WDR97A6NE52 1622 aa14.04□□□□□ -0.16
SH3TC2-214ENST00000515229 ABCA10Q8WWZ4 1543 aa14.02□□□□□ -0.16
SH3TC2-214ENST00000515229 GAPVD1Q14C86 1478 aa13.99□□□□□ -0.17
SH3TC2-214ENST00000515229 GRIN2BQ13224 1484 aa13.99□□□□□ -0.17
SH3TC2-214ENST00000515229 FBLN2P98095 1184 aa13.98□□□□□ -0.17
SH3TC2-214ENST00000515229 OSCARQ8IYS5 282 aa13.98□□□□□ -0.17
SH3TC2-214ENST00000515229 PBRM1Q86U86 1689 aa13.98□□□□□ -0.17
SH3TC2-214ENST00000515229 SNAPC4Q5SXM2 1469 aa13.97□□□□□ -0.17
SH3TC2-214ENST00000515229 ABCA5Q8WWZ7 1642 aa13.97□□□□□ -0.17
SH3TC2-214ENST00000515229 CHD1O14646 1710 aa13.95□□□□□ -0.18
SH3TC2-214ENST00000515229 MAGI1Q96QZ7 1491 aaPredicted RBP13.93□□□□□ -0.18
SH3TC2-214ENST00000515229 CHMP7Q8WUX9 453 aaPredicted RBP13.92□□□□□ -0.18
SH3TC2-214ENST00000515229 SYNJ2O15056 1496 aa13.88□□□□□ -0.19
SH3TC2-214ENST00000515229 TRIM41Q8WV44 630 aa13.87□□□□□ -0.19
SH3TC2-214ENST00000515229 KIF27Q86VH2 1401 aa13.87□□□□□ -0.19
SH3TC2-214ENST00000515229 ERICH3Q5RHP9 1530 aa13.86□□□□□ -0.19
SH3TC2-214ENST00000515229 ADAMTS12P58397 1594 aa13.84□□□□□ -0.19
SH3TC2-214ENST00000515229 FHAD1B1AJZ9 1412 aa13.82□□□□□ -0.2
SH3TC2-214ENST00000515229 GRIN2AQ12879 1464 aa13.8□□□□□ -0.2
SH3TC2-214ENST00000515229 CUL7Q14999 1698 aa13.76□□□□□ -0.21
SH3TC2-214ENST00000515229 IGF1RP08069 1367 aa13.76□□□□□ -0.21
SH3TC2-214ENST00000515229 CLASP1Q7Z460 1538 aa13.75□□□□□ -0.21
SH3TC2-214ENST00000515229 RIMBP3CA6NJZ7 1639 aa13.75□□□□□ -0.21
SH3TC2-214ENST00000515229 RIMBP3BA6NNM3 1639 aa13.75□□□□□ -0.21
SH3TC2-214ENST00000515229 RIMBP3Q9UFD9 1639 aa13.75□□□□□ -0.21
SH3TC2-214ENST00000515229 ARHGEF11O15085 1522 aa13.74□□□□□ -0.21
SH3TC2-214ENST00000515229 CEP170Q5SW79 1584 aa13.72□□□□□ -0.21
SH3TC2-214ENST00000515229 RUSC2Q8N2Y8 1516 aa13.72□□□□□ -0.21
SH3TC2-214ENST00000515229 NUP160Q12769 1436 aa13.72□□□□□ -0.21
SH3TC2-214ENST00000515229 CARMIL1Q5VZK9 1371 aa13.71□□□□□ -0.21
SH3TC2-214ENST00000515229 CHIC1Q5VXU3 224 aa13.67□□□□□ -0.22
SH3TC2-214ENST00000515229 CYB5RLQ6IPT4 315 aa13.65□□□□□ -0.22
SH3TC2-214ENST00000515229 RAPGEF2Q9Y4G8 1499 aa13.63□□□□□ -0.23
SH3TC2-214ENST00000515229 ARAP1Q96P48 1450 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms