RNA–Protein interactions for RNA: ENST00000515219.5

DDR1-277, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-277ENST00000515219 NISCHQ9Y2I1 1504 aa42.49■■■■■ 4.39
DDR1-277ENST00000515219 CCDC180Q9P1Z9 1646 aa37.87■■■■□ 3.65
DDR1-277ENST00000515219 ABCC9O60706 1549 aa37.27■■■■□ 3.56
DDR1-277ENST00000515219 RB1CC1Q8TDY2 1594 aa35.76■■■■□ 3.31
DDR1-277ENST00000515219 DCAF8L2P0C7V8 631 aa35.67■■■■□ 3.3
DDR1-277ENST00000515219 NACADO15069 1562 aa35.64■■■■□ 3.3
DDR1-277ENST00000515219 ZCCHC6Q5VYS8 1495 aaKnown RBP35.34■■■■□ 3.25
DDR1-277ENST00000515219 MYO15BQ96JP2 1530 aa35.32■■■■□ 3.24
DDR1-277ENST00000515219 DCAF1Q9Y4B6 1507 aa35.11■■■■□ 3.21
DDR1-277ENST00000515219 UNC13AQ9UPW8 1703 aa34.99■■■■□ 3.19
DDR1-277ENST00000515219 PABPN1Q86U42 306 aaKnown RBP eCLIP34.8■■■■□ 3.16
DDR1-277ENST00000515219 BICRAQ9NZM4 1560 aa34.66■■■■□ 3.14
DDR1-277ENST00000515219 SCRIBQ14160 1630 aa34.58■■■■□ 3.13
DDR1-277ENST00000515219 DNAJC5BQ9UF47 199 aa34.35■■■■□ 3.09
DDR1-277ENST00000515219 SHROOM4Q9ULL8 1493 aa34.23■■■■□ 3.07
DDR1-277ENST00000515219 EIF4G1Q04637 1599 aaKnown RBP33.77■■■■□ 3
DDR1-277ENST00000515219 CC2D2AQ9P2K1 1620 aa33.7■■■□□ 2.99
DDR1-277ENST00000515219 CECR2Q9BXF3 1484 aa33.49■■■□□ 2.95
DDR1-277ENST00000515219 SMARCA4P51532 1647 aa33.03■■■□□ 2.88
DDR1-277ENST00000515219 BAZ1AQ9NRL2 1556 aaPredicted RBP32.96■■■□□ 2.87
DDR1-277ENST00000515219 NCAPD3P42695 1498 aa32.87■■■□□ 2.85
DDR1-277ENST00000515219 ATAD2BQ9ULI0 1458 aa32.87■■■□□ 2.85
DDR1-277ENST00000515219 SMARCA2P51531 1590 aa32.83■■■□□ 2.85
DDR1-277ENST00000515219 MROH2BQ7Z745 1585 aa32.75■■■□□ 2.83
DDR1-277ENST00000515219 HMGXB3Q12766 1538 aa32.71■■■□□ 2.83
DDR1-277ENST00000515219 PEG3Q9GZU2 1588 aa32.66■■■□□ 2.82
DDR1-277ENST00000515219 BAZ1BQ9UIG0 1483 aaKnown RBP32.62■■■□□ 2.81
DDR1-277ENST00000515219 WIZO95785 1651 aa32.43■■■□□ 2.78
DDR1-277ENST00000515219 RSF1Q96T23 1441 aaPredicted RBP32.29■■■□□ 2.76
DDR1-277ENST00000515219 NESP48681 1621 aa32.18■■■□□ 2.74
DDR1-277ENST00000515219 ERCC6Q03468 1493 aa32.15■■■□□ 2.74
DDR1-277ENST00000515219 LAMC3Q9Y6N6 1575 aa32.07■■■□□ 2.72
DDR1-277ENST00000515219 TOP2AP11388 1531 aaKnown RBP32.03■■■□□ 2.72
DDR1-277ENST00000515219 CADPSQ9ULU8 1353 aa31.92■■■□□ 2.7
DDR1-277ENST00000515219 PDS5BQ9NTI5 1447 aa31.85■■■□□ 2.69
DDR1-277ENST00000515219 KIF21AQ7Z4S6 1674 aa31.83■■■□□ 2.69
DDR1-277ENST00000515219 CUX2O14529 1486 aa31.83■■■□□ 2.69
DDR1-277ENST00000515219 THOC2Q8NI27 1593 aaKnown RBP31.73■■■□□ 2.67
DDR1-277ENST00000515219 CFTRP13569 1480 aa31.68■■■□□ 2.66
DDR1-277ENST00000515219 CCDC88BA6NC98 1476 aa31.66■■■□□ 2.66
DDR1-277ENST00000515219 FANCD2Q9BXW9 1451 aa31.58■■■□□ 2.65
DDR1-277ENST00000515219 CEP164Q9UPV0 1460 aa31.56■■■□□ 2.64
DDR1-277ENST00000515219 MRC2Q9UBG0 1479 aa31.54■■■□□ 2.64
DDR1-277ENST00000515219 PRDM2Q13029 1718 aa31.5■■■□□ 2.63
DDR1-277ENST00000515219 WDR62O43379 1518 aa31.43■■■□□ 2.62
DDR1-277ENST00000515219 SUPT5HO00267 1087 aaKnown RBP31.41■■■□□ 2.62
DDR1-277ENST00000515219 URB2Q14146 1524 aaKnown RBP31.26■■■□□ 2.59
DDR1-277ENST00000515219 DNAJC5Q9H3Z4 198 aa31.08■■■□□ 2.57
DDR1-277ENST00000515219 TOPBP1Q92547 1522 aa31.04■■■□□ 2.56
DDR1-277ENST00000515219 ABCC8Q09428 1581 aa31.02■■■□□ 2.56
DDR1-277ENST00000515219 DNMBPQ6XZF7 1577 aa31■■■□□ 2.55
DDR1-277ENST00000515219 IFT140Q96RY7 1462 aa30.89■■■□□ 2.53
DDR1-277ENST00000515219 ZNF608Q9ULD9 1512 aaPredicted RBP30.78■■■□□ 2.52
DDR1-277ENST00000515219 POLA1P09884 1462 aaPredicted RBP30.76■■■□□ 2.51
DDR1-277ENST00000515219 CUX1P39880 1505 aa30.74■■■□□ 2.51
DDR1-277ENST00000515219 TARBP1Q13395 1621 aaKnown RBP30.72■■■□□ 2.51
DDR1-277ENST00000515219 FGD5Q6ZNL6 1462 aa30.68■■■□□ 2.5
DDR1-277ENST00000515219 EIF4G3O43432 1585 aaKnown RBP30.66■■■□□ 2.5
DDR1-277ENST00000515219 RAD54L2Q9Y4B4 1467 aa30.65■■■□□ 2.5
DDR1-277ENST00000515219 SOGA1O94964 1423 aa30.64■■■□□ 2.5
DDR1-277ENST00000515219 AQRO60306 1485 aaKnown RBP eCLIP30.59■■■□□ 2.492e-7■■■■■ 31.6
DDR1-277ENST00000515219 OSCARQ8IYS5 282 aa30.5■■■□□ 2.47
DDR1-277ENST00000515219 TDRD9Q8NDG6 1382 aaKnown RBP30.5■■■□□ 2.47
DDR1-277ENST00000515219 WRNQ14191 1432 aaPredicted RBP eCLIP30.47■■■□□ 2.47
DDR1-277ENST00000515219 WDR97A6NE52 1622 aa30.45■■■□□ 2.47
DDR1-277ENST00000515219 BIVM-ERCC5R4GMW8 1640 aa30.44■■■□□ 2.46
DDR1-277ENST00000515219 TOP2BQ02880 1626 aa30.43■■■□□ 2.46
DDR1-277ENST00000515219 SYNJ1O43426 1573 aa30.42■■■□□ 2.46
DDR1-277ENST00000515219 ABCA10Q8WWZ4 1543 aa30.35■■■□□ 2.45
DDR1-277ENST00000515219 CHD1O14646 1710 aa30.35■■■□□ 2.45
DDR1-277ENST00000515219 FBLN2P98095 1184 aa30.3■■■□□ 2.44
DDR1-277ENST00000515219 GRIN2BQ13224 1484 aa30.3■■■□□ 2.44
DDR1-277ENST00000515219 SNAPC4Q5SXM2 1469 aa30.3■■■□□ 2.44
DDR1-277ENST00000515219 GAPVD1Q14C86 1478 aa30.29■■■□□ 2.44
DDR1-277ENST00000515219 PBRM1Q86U86 1689 aa30.28■■■□□ 2.44
DDR1-277ENST00000515219 ABCA5Q8WWZ7 1642 aa30.25■■■□□ 2.43
DDR1-277ENST00000515219 MAGI1Q96QZ7 1491 aaPredicted RBP30.24■■■□□ 2.43
DDR1-277ENST00000515219 CHMP7Q8WUX9 453 aaPredicted RBP30.16■■■□□ 2.42
DDR1-277ENST00000515219 SYNJ2O15056 1496 aa30.12■■■□□ 2.41
DDR1-277ENST00000515219 RIMBP3CA6NJZ7 1639 aa30.05■■■□□ 2.4
DDR1-277ENST00000515219 RIMBP3BA6NNM3 1639 aa30.05■■■□□ 2.4
DDR1-277ENST00000515219 RIMBP3Q9UFD9 1639 aa30.05■■■□□ 2.4
DDR1-277ENST00000515219 TRIM41Q8WV44 630 aa30.05■■■□□ 2.4
DDR1-277ENST00000515219 ARHGEF11O15085 1522 aa30.01■■■□□ 2.39
DDR1-277ENST00000515219 ADAMTS12P58397 1594 aa29.98■■■□□ 2.39
DDR1-277ENST00000515219 ERICH3Q5RHP9 1530 aa29.98■■■□□ 2.39
DDR1-277ENST00000515219 CLASP1Q7Z460 1538 aa29.96■■■□□ 2.39
DDR1-277ENST00000515219 FHAD1B1AJZ9 1412 aa29.92■■■□□ 2.38
DDR1-277ENST00000515219 GRIN2AQ12879 1464 aa29.92■■■□□ 2.38
DDR1-277ENST00000515219 KIF27Q86VH2 1401 aa29.86■■■□□ 2.37
DDR1-277ENST00000515219 CEP170Q5SW79 1584 aa29.78■■■□□ 2.36
DDR1-277ENST00000515219 NUP160Q12769 1436 aa29.77■■■□□ 2.36
DDR1-277ENST00000515219 CYB5RLQ6IPT4 315 aa29.76■■■□□ 2.35
DDR1-277ENST00000515219 ARAP1Q96P48 1450 aa29.74■■■□□ 2.35
DDR1-277ENST00000515219 IGF1RP08069 1367 aa29.74■■■□□ 2.35
DDR1-277ENST00000515219 CUL7Q14999 1698 aa29.7■■■□□ 2.35
DDR1-277ENST00000515219 SHROOM2Q13796 1616 aa29.58■■■□□ 2.33
DDR1-277ENST00000515219 CARMIL1Q5VZK9 1371 aa29.58■■■□□ 2.33
DDR1-277ENST00000515219 ERCC6L2Q5T890 1561 aa29.55■■■□□ 2.32
DDR1-277ENST00000515219 RUSC2Q8N2Y8 1516 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms