RNA–Protein interactions for RNA: ENST00000515191.1

PLXND1-217, Transcript of plexin D1, humanhuman

TSL 4

Gene PLXND1, Length 602 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-217ENST00000515191 NISCHQ9Y2I1 1504 aa40.56■■■■■ 4.08
PLXND1-217ENST00000515191 CCDC180Q9P1Z9 1646 aa36.16■■■■□ 3.38
PLXND1-217ENST00000515191 ABCC9O60706 1549 aa36.06■■■■□ 3.36
PLXND1-217ENST00000515191 RB1CC1Q8TDY2 1594 aa34.36■■■■□ 3.09
PLXND1-217ENST00000515191 NACADO15069 1562 aa34.2■■■■□ 3.07
PLXND1-217ENST00000515191 DCAF8L2P0C7V8 631 aa34.17■■■■□ 3.06
PLXND1-217ENST00000515191 MYO15BQ96JP2 1530 aa33.84■■■■□ 3.01
PLXND1-217ENST00000515191 DNAJC5BQ9UF47 199 aa33.74■■■□□ 2.99
PLXND1-217ENST00000515191 PABPN1Q86U42 306 aaKnown RBP eCLIP33.68■■■□□ 2.98
PLXND1-217ENST00000515191 ZCCHC6Q5VYS8 1495 aaKnown RBP33.65■■■□□ 2.98
PLXND1-217ENST00000515191 UNC13AQ9UPW8 1703 aa33.52■■■□□ 2.96
PLXND1-217ENST00000515191 DCAF1Q9Y4B6 1507 aa33.49■■■□□ 2.95
PLXND1-217ENST00000515191 BICRAQ9NZM4 1560 aa33.42■■■□□ 2.94
PLXND1-217ENST00000515191 SCRIBQ14160 1630 aa33.02■■■□□ 2.88
PLXND1-217ENST00000515191 SHROOM4Q9ULL8 1493 aa32.93■■■□□ 2.86
PLXND1-217ENST00000515191 CC2D2AQ9P2K1 1620 aa32.55■■■□□ 2.8
PLXND1-217ENST00000515191 EIF4G1Q04637 1599 aaKnown RBP32.54■■■□□ 2.8
PLXND1-217ENST00000515191 CECR2Q9BXF3 1484 aa32.45■■■□□ 2.79
PLXND1-217ENST00000515191 NCAPD3P42695 1498 aa31.65■■■□□ 2.66
PLXND1-217ENST00000515191 ATAD2BQ9ULI0 1458 aa31.58■■■□□ 2.65
PLXND1-217ENST00000515191 SMARCA4P51532 1647 aa31.53■■■□□ 2.64
PLXND1-217ENST00000515191 SMARCA2P51531 1590 aa31.43■■■□□ 2.62
PLXND1-217ENST00000515191 BAZ1AQ9NRL2 1556 aaPredicted RBP31.42■■■□□ 2.62
PLXND1-217ENST00000515191 HMGXB3Q12766 1538 aa31.35■■■□□ 2.61
PLXND1-217ENST00000515191 MROH2BQ7Z745 1585 aa31.27■■■□□ 2.6
PLXND1-217ENST00000515191 PEG3Q9GZU2 1588 aa31.25■■■□□ 2.59
PLXND1-217ENST00000515191 BAZ1BQ9UIG0 1483 aaKnown RBP31.23■■■□□ 2.59
PLXND1-217ENST00000515191 NESP48681 1621 aa31.06■■■□□ 2.56
PLXND1-217ENST00000515191 ERCC6Q03468 1493 aa31.06■■■□□ 2.56
PLXND1-217ENST00000515191 CUX2O14529 1486 aa30.94■■■□□ 2.54
PLXND1-217ENST00000515191 WIZO95785 1651 aa30.85■■■□□ 2.53
PLXND1-217ENST00000515191 LAMC3Q9Y6N6 1575 aa30.8■■■□□ 2.52
PLXND1-217ENST00000515191 DNAJC5Q9H3Z4 198 aa30.75■■■□□ 2.51
PLXND1-217ENST00000515191 RSF1Q96T23 1441 aaPredicted RBP30.74■■■□□ 2.51
PLXND1-217ENST00000515191 CADPSQ9ULU8 1353 aa30.69■■■□□ 2.5
PLXND1-217ENST00000515191 PDS5BQ9NTI5 1447 aa30.66■■■□□ 2.5
PLXND1-217ENST00000515191 THOC2Q8NI27 1593 aaKnown RBP30.62■■■□□ 2.49
PLXND1-217ENST00000515191 KIF21AQ7Z4S6 1674 aa30.55■■■□□ 2.48
PLXND1-217ENST00000515191 TOP2AP11388 1531 aaKnown RBP30.48■■■□□ 2.47
PLXND1-217ENST00000515191 CFTRP13569 1480 aa30.38■■■□□ 2.45
PLXND1-217ENST00000515191 MRC2Q9UBG0 1479 aa30.38■■■□□ 2.45
PLXND1-217ENST00000515191 FANCD2Q9BXW9 1451 aa30.31■■■□□ 2.44
PLXND1-217ENST00000515191 CEP164Q9UPV0 1460 aa30.29■■■□□ 2.44
PLXND1-217ENST00000515191 WDR62O43379 1518 aa30.28■■■□□ 2.44
PLXND1-217ENST00000515191 CCDC88BA6NC98 1476 aa30.2■■■□□ 2.43
PLXND1-217ENST00000515191 URB2Q14146 1524 aaKnown RBP30.06■■■□□ 2.4
PLXND1-217ENST00000515191 PRDM2Q13029 1718 aa29.9■■■□□ 2.38
PLXND1-217ENST00000515191 TOPBP1Q92547 1522 aa29.76■■■□□ 2.36
PLXND1-217ENST00000515191 IFT140Q96RY7 1462 aa29.7■■■□□ 2.35
PLXND1-217ENST00000515191 ABCC8Q09428 1581 aa29.69■■■□□ 2.34
PLXND1-217ENST00000515191 ZNF608Q9ULD9 1512 aaPredicted RBP29.67■■■□□ 2.34
PLXND1-217ENST00000515191 OSCARQ8IYS5 282 aa29.64■■■□□ 2.34
PLXND1-217ENST00000515191 DNMBPQ6XZF7 1577 aa29.64■■■□□ 2.33
PLXND1-217ENST00000515191 SUPT5HO00267 1087 aaKnown RBP29.57■■■□□ 2.32
PLXND1-217ENST00000515191 POLA1P09884 1462 aaPredicted RBP29.48■■■□□ 2.31
PLXND1-217ENST00000515191 TARBP1Q13395 1621 aaKnown RBP29.46■■■□□ 2.31
PLXND1-217ENST00000515191 TRIM41Q8WV44 630 aa29.46■■■□□ 2.31
PLXND1-217ENST00000515191 AQRO60306 1485 aaKnown RBP eCLIP29.44■■■□□ 2.3
PLXND1-217ENST00000515191 EIF4G3O43432 1585 aaKnown RBP29.43■■■□□ 2.3
PLXND1-217ENST00000515191 RAD54L2Q9Y4B4 1467 aa29.4■■■□□ 2.3
PLXND1-217ENST00000515191 SOGA1O94964 1423 aa29.37■■■□□ 2.29
PLXND1-217ENST00000515191 CUX1P39880 1505 aa29.35■■■□□ 2.29
PLXND1-217ENST00000515191 FGD5Q6ZNL6 1462 aa29.32■■■□□ 2.28
PLXND1-217ENST00000515191 TDRD9Q8NDG6 1382 aaKnown RBP29.31■■■□□ 2.28
PLXND1-217ENST00000515191 FBLN2P98095 1184 aa29.19■■■□□ 2.26
PLXND1-217ENST00000515191 RIMBP3CA6NJZ7 1639 aa29.13■■■□□ 2.25
PLXND1-217ENST00000515191 RIMBP3BA6NNM3 1639 aa29.13■■■□□ 2.25
PLXND1-217ENST00000515191 RIMBP3Q9UFD9 1639 aa29.13■■■□□ 2.25
PLXND1-217ENST00000515191 WDR97A6NE52 1622 aa29.12■■■□□ 2.25
PLXND1-217ENST00000515191 CHD1O14646 1710 aa29.11■■■□□ 2.25
PLXND1-217ENST00000515191 SNAPC4Q5SXM2 1469 aa29.1■■■□□ 2.25
PLXND1-217ENST00000515191 ARHGEF11O15085 1522 aa29.1■■■□□ 2.25
PLXND1-217ENST00000515191 GRIN2BQ13224 1484 aa29.06■■■□□ 2.24
PLXND1-217ENST00000515191 MAGI1Q96QZ7 1491 aaPredicted RBP29.02■■■□□ 2.24
PLXND1-217ENST00000515191 ABCA10Q8WWZ4 1543 aa29.01■■■□□ 2.23
PLXND1-217ENST00000515191 CHMP7Q8WUX9 453 aaPredicted RBP29.01■■■□□ 2.23
PLXND1-217ENST00000515191 GAPVD1Q14C86 1478 aa29■■■□□ 2.23
PLXND1-217ENST00000515191 WRNQ14191 1432 aaPredicted RBP eCLIP28.95■■■□□ 2.23
PLXND1-217ENST00000515191 CYB5RLQ6IPT4 315 aa28.94■■■□□ 2.22
PLXND1-217ENST00000515191 SYNJ2O15056 1496 aa28.93■■■□□ 2.22
PLXND1-217ENST00000515191 ABCA5Q8WWZ7 1642 aa28.91■■■□□ 2.22
PLXND1-217ENST00000515191 TOP2BQ02880 1626 aa28.9■■■□□ 2.22
PLXND1-217ENST00000515191 SYNJ1O43426 1573 aa28.89■■■□□ 2.22
PLXND1-217ENST00000515191 CLASP1Q7Z460 1538 aa28.88■■■□□ 2.21
PLXND1-217ENST00000515191 BIVM-ERCC5R4GMW8 1640 aa28.87■■■□□ 2.21
PLXND1-217ENST00000515191 ARAP1Q96P48 1450 aa28.85■■■□□ 2.21
PLXND1-217ENST00000515191 PBRM1Q86U86 1689 aa28.85■■■□□ 2.21
PLXND1-217ENST00000515191 GRIN2AQ12879 1464 aa28.69■■■□□ 2.18
PLXND1-217ENST00000515191 ADAMTS12P58397 1594 aa28.66■■■□□ 2.18
PLXND1-217ENST00000515191 FHAD1B1AJZ9 1412 aa28.65■■■□□ 2.18
PLXND1-217ENST00000515191 ERICH3Q5RHP9 1530 aa28.62■■■□□ 2.17
PLXND1-217ENST00000515191 NUP160Q12769 1436 aa28.6■■■□□ 2.17
PLXND1-217ENST00000515191 CEP170Q5SW79 1584 aa28.56■■■□□ 2.16
PLXND1-217ENST00000515191 TRHP20396 242 aaPredicted RBP28.5■■■□□ 2.15
PLXND1-217ENST00000515191 ERCC6L2Q5T890 1561 aa28.48■■■□□ 2.15
PLXND1-217ENST00000515191 IGF1RP08069 1367 aa28.42■■■□□ 2.14
PLXND1-217ENST00000515191 SHROOM2Q13796 1616 aa28.39■■■□□ 2.13
PLXND1-217ENST00000515191 KIF27Q86VH2 1401 aa28.38■■■□□ 2.13
PLXND1-217ENST00000515191 JPH4Q96JJ6 628 aa28.36■■■□□ 2.13
PLXND1-217ENST00000515191 PRG4Q92954 1404 aaPredicted RBP28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms