RNA–Protein interactions for RNA: ENST00000515068.1

CSF1R-207, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 5

Gene CSF1R, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-207ENST00000515068 NISCHQ9Y2I1 1504 aa28.87■■■□□ 2.21
CSF1R-207ENST00000515068 CCDC180Q9P1Z9 1646 aa25.23■■□□□ 1.63
CSF1R-207ENST00000515068 ZCCHC6Q5VYS8 1495 aaKnown RBP24.25■■□□□ 1.47
CSF1R-207ENST00000515068 ABCC9O60706 1549 aa23.92■■□□□ 1.42
CSF1R-207ENST00000515068 DCAF1Q9Y4B6 1507 aa23.86■■□□□ 1.41
CSF1R-207ENST00000515068 DCAF8L2P0C7V8 631 aa23.67■■□□□ 1.38
CSF1R-207ENST00000515068 MYO15BQ96JP2 1530 aa23.59■■□□□ 1.37
CSF1R-207ENST00000515068 NACADO15069 1562 aa23.47■■□□□ 1.35
CSF1R-207ENST00000515068 SHROOM4Q9ULL8 1493 aa23.42■■□□□ 1.34
CSF1R-207ENST00000515068 RB1CC1Q8TDY2 1594 aa23.27■■□□□ 1.32
CSF1R-207ENST00000515068 SCRIBQ14160 1630 aa23.19■■□□□ 1.3
CSF1R-207ENST00000515068 UNC13AQ9UPW8 1703 aa23■■□□□ 1.27
CSF1R-207ENST00000515068 BICRAQ9NZM4 1560 aa22.76■■□□□ 1.23
CSF1R-207ENST00000515068 PABPN1Q86U42 306 aaKnown RBP eCLIP22.52■■□□□ 1.2
CSF1R-207ENST00000515068 CECR2Q9BXF3 1484 aa22.5■■□□□ 1.19
CSF1R-207ENST00000515068 DNAJC5BQ9UF47 199 aa22.45■■□□□ 1.18
CSF1R-207ENST00000515068 SUPT5HO00267 1087 aaKnown RBP22.4■■□□□ 1.18
CSF1R-207ENST00000515068 RSF1Q96T23 1441 aaPredicted RBP22.37■■□□□ 1.17
CSF1R-207ENST00000515068 MROH2BQ7Z745 1585 aa22.35■■□□□ 1.17
CSF1R-207ENST00000515068 BAZ1AQ9NRL2 1556 aaPredicted RBP22.24■■□□□ 1.15
CSF1R-207ENST00000515068 SMARCA4P51532 1647 aa22.24■■□□□ 1.15
CSF1R-207ENST00000515068 WIZO95785 1651 aa22.17■■□□□ 1.14
CSF1R-207ENST00000515068 EIF4G1Q04637 1599 aaKnown RBP21.97■■□□□ 1.11
CSF1R-207ENST00000515068 PEG3Q9GZU2 1588 aa21.97■■□□□ 1.11
CSF1R-207ENST00000515068 TOP2AP11388 1531 aaKnown RBP21.87■■□□□ 1.09
CSF1R-207ENST00000515068 ATAD2BQ9ULI0 1458 aa21.87■■□□□ 1.09
CSF1R-207ENST00000515068 SMARCA2P51531 1590 aa21.78■■□□□ 1.08
CSF1R-207ENST00000515068 NCAPD3P42695 1498 aa21.69■■□□□ 1.06
CSF1R-207ENST00000515068 CC2D2AQ9P2K1 1620 aa21.68■■□□□ 1.06
CSF1R-207ENST00000515068 BAZ1BQ9UIG0 1483 aaKnown RBP21.67■■□□□ 1.06
CSF1R-207ENST00000515068 CCDC88BA6NC98 1476 aa21.66■■□□□ 1.06
CSF1R-207ENST00000515068 HMGXB3Q12766 1538 aa21.65■■□□□ 1.06
CSF1R-207ENST00000515068 CHIC1Q5VXU3 224 aa21.49■■□□□ 1.03
CSF1R-207ENST00000515068 ABCC8Q09428 1581 aa21.2■□□□□ 0.98
CSF1R-207ENST00000515068 CFTRP13569 1480 aa21.18■□□□□ 0.98
CSF1R-207ENST00000515068 PRDM2Q13029 1718 aa21.12■□□□□ 0.97
CSF1R-207ENST00000515068 CADPSQ9ULU8 1353 aa21.09■□□□□ 0.97
CSF1R-207ENST00000515068 NESP48681 1621 aa21.04■□□□□ 0.96
CSF1R-207ENST00000515068 TRIM41Q8WV44 630 aa21.02■□□□□ 0.96
CSF1R-207ENST00000515068 SYNJ1O43426 1573 aa21.02■□□□□ 0.95
CSF1R-207ENST00000515068 WRNQ14191 1432 aaPredicted RBP eCLIP20.97■□□□□ 0.95
CSF1R-207ENST00000515068 LAMC3Q9Y6N6 1575 aa20.94■□□□□ 0.94
CSF1R-207ENST00000515068 BIVM-ERCC5R4GMW8 1640 aa20.91■□□□□ 0.94
CSF1R-207ENST00000515068 CUX1P39880 1505 aa20.9■□□□□ 0.94
CSF1R-207ENST00000515068 TOP2BQ02880 1626 aa20.89■□□□□ 0.93
CSF1R-207ENST00000515068 FANCD2Q9BXW9 1451 aa20.86■□□□□ 0.93
CSF1R-207ENST00000515068 KIF21AQ7Z4S6 1674 aa20.8■□□□□ 0.92
CSF1R-207ENST00000515068 RUSC2Q8N2Y8 1516 aa20.76■□□□□ 0.91
CSF1R-207ENST00000515068 SOGA1O94964 1423 aa20.76■□□□□ 0.91
CSF1R-207ENST00000515068 CEP164Q9UPV0 1460 aa20.71■□□□□ 0.91
CSF1R-207ENST00000515068 FAM9AQ8IZU1 332 aaPredicted RBP20.7■□□□□ 0.9
CSF1R-207ENST00000515068 PDS5BQ9NTI5 1447 aa20.7■□□□□ 0.9
CSF1R-207ENST00000515068 URB2Q14146 1524 aaKnown RBP20.69■□□□□ 0.9
CSF1R-207ENST00000515068 DNMBPQ6XZF7 1577 aa20.68■□□□□ 0.9
CSF1R-207ENST00000515068 LOC105371045A0A1W2PR82 267 aa20.67■□□□□ 0.9
CSF1R-207ENST00000515068 TOPBP1Q92547 1522 aa20.67■□□□□ 0.9
CSF1R-207ENST00000515068 FGD5Q6ZNL6 1462 aa20.63■□□□□ 0.89
CSF1R-207ENST00000515068 DNAJC5Q9H3Z4 198 aa20.59■□□□□ 0.89
CSF1R-207ENST00000515068 POLA1P09884 1462 aaPredicted RBP20.56■□□□□ 0.88
CSF1R-207ENST00000515068 EEA1Q15075 1411 aa20.55■□□□□ 0.88
CSF1R-207ENST00000515068 MRC2Q9UBG0 1479 aa20.52■□□□□ 0.88
CSF1R-207ENST00000515068 RAD54L2Q9Y4B4 1467 aa20.51■□□□□ 0.87
CSF1R-207ENST00000515068 WDR97A6NE52 1622 aa20.49■□□□□ 0.87
CSF1R-207ENST00000515068 THOC2Q8NI27 1593 aaKnown RBP20.49■□□□□ 0.87
CSF1R-207ENST00000515068 CSRNP3Q8WYN3 585 aa20.48■□□□□ 0.87
CSF1R-207ENST00000515068 ERCC6Q03468 1493 aa20.47■□□□□ 0.87
CSF1R-207ENST00000515068 WDR62O43379 1518 aa20.47■□□□□ 0.87
CSF1R-207ENST00000515068 CUX2O14529 1486 aa20.44■□□□□ 0.86
CSF1R-207ENST00000515068 ABCA10Q8WWZ4 1543 aa20.43■□□□□ 0.86
CSF1R-207ENST00000515068 TARBP1Q13395 1621 aaKnown RBP20.43■□□□□ 0.86
CSF1R-207ENST00000515068 KIF21BO75037 1637 aa20.42■□□□□ 0.86
CSF1R-207ENST00000515068 EHMT2Q96KQ7 1210 aa20.41■□□□□ 0.86
CSF1R-207ENST00000515068 KIF27Q86VH2 1401 aa20.41■□□□□ 0.86
CSF1R-207ENST00000515068 PRXQ9BXM0 1461 aa20.36■□□□□ 0.85
CSF1R-207ENST00000515068 ABCA5Q8WWZ7 1642 aa20.35■□□□□ 0.85
CSF1R-207ENST00000515068 IGF1RP08069 1367 aa20.34■□□□□ 0.85
CSF1R-207ENST00000515068 RAPGEF2Q9Y4G8 1499 aa20.32■□□□□ 0.84
CSF1R-207ENST00000515068 GOLGA3Q08378 1498 aa20.31■□□□□ 0.84
CSF1R-207ENST00000515068 TDRD9Q8NDG6 1382 aaKnown RBP20.26■□□□□ 0.83
CSF1R-207ENST00000515068 ERICH3Q5RHP9 1530 aa20.26■□□□□ 0.83
CSF1R-207ENST00000515068 TNIKQ9UKE5 1360 aa20.24■□□□□ 0.83
CSF1R-207ENST00000515068 IFT140Q96RY7 1462 aa20.23■□□□□ 0.83
CSF1R-207ENST00000515068 ZNF608Q9ULD9 1512 aaPredicted RBP20.22■□□□□ 0.83
CSF1R-207ENST00000515068 GAPVD1Q14C86 1478 aa20.21■□□□□ 0.83
CSF1R-207ENST00000515068 PBRM1Q86U86 1689 aa20.19■□□□□ 0.82
CSF1R-207ENST00000515068 AQRO60306 1485 aaKnown RBP eCLIP20.18■□□□□ 0.82
CSF1R-207ENST00000515068 CARMIL1Q5VZK9 1371 aa20.17■□□□□ 0.82
CSF1R-207ENST00000515068 CUL7Q14999 1698 aa20.16■□□□□ 0.82
CSF1R-207ENST00000515068 CEP162Q5TB80 1403 aa20.13■□□□□ 0.81
CSF1R-207ENST00000515068 EIF4G3O43432 1585 aaKnown RBP20.12■□□□□ 0.81
CSF1R-207ENST00000515068 UBTFP17480 764 aaKnown RBP20.12■□□□□ 0.81
CSF1R-207ENST00000515068 ADAMTS12P58397 1594 aa20.07■□□□□ 0.8
CSF1R-207ENST00000515068 GRIN2BQ13224 1484 aa20.05■□□□□ 0.8
CSF1R-207ENST00000515068 FHAD1B1AJZ9 1412 aa19.98■□□□□ 0.79
CSF1R-207ENST00000515068 CLIP1P30622 1438 aa19.98■□□□□ 0.79
CSF1R-207ENST00000515068 SNAPC4Q5SXM2 1469 aa19.98■□□□□ 0.79
CSF1R-207ENST00000515068 CTTNBP2Q8WZ74 1663 aa19.97■□□□□ 0.79
CSF1R-207ENST00000515068 ARAP1Q96P48 1450 aa19.92■□□□□ 0.78
CSF1R-207ENST00000515068 ARHGAP35Q9NRY4 1499 aa19.91■□□□□ 0.78
CSF1R-207ENST00000515068 MAGI1Q96QZ7 1491 aaPredicted RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms