RNA–Protein interactions for RNA: ENST00000515058.5

GDNF-207, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 5 BASIC

Gene GDNF, Length 764 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-207ENST00000515058 NISCHQ9Y2I1 1504 aa33.34■■■□□ 2.93
GDNF-207ENST00000515058 ABCC9O60706 1549 aa29.99■■■□□ 2.39
GDNF-207ENST00000515058 CCDC180Q9P1Z9 1646 aa29.81■■■□□ 2.36
GDNF-207ENST00000515058 RB1CC1Q8TDY2 1594 aa28.45■■■□□ 2.14
GDNF-207ENST00000515058 DNAJC5BQ9UF47 199 aa28.35■■■□□ 2.13
GDNF-207ENST00000515058 NACADO15069 1562 aa28.28■■■□□ 2.12
GDNF-207ENST00000515058 DCAF8L2P0C7V8 631 aa28.16■■■□□ 2.1
GDNF-207ENST00000515058 PABPN1Q86U42 306 aaKnown RBP eCLIP27.99■■■□□ 2.07
GDNF-207ENST00000515058 MYO15BQ96JP2 1530 aa27.92■■■□□ 2.06
GDNF-207ENST00000515058 BICRAQ9NZM4 1560 aa27.71■■■□□ 2.03
GDNF-207ENST00000515058 UNC13AQ9UPW8 1703 aa27.71■■■□□ 2.03
GDNF-207ENST00000515058 ZCCHC6Q5VYS8 1495 aaKnown RBP27.61■■■□□ 2.01
GDNF-207ENST00000515058 DCAF1Q9Y4B6 1507 aa27.53■■■□□ 2
GDNF-207ENST00000515058 SHROOM4Q9ULL8 1493 aa27.29■■□□□ 1.96
GDNF-207ENST00000515058 SCRIBQ14160 1630 aa27.19■■□□□ 1.94
GDNF-207ENST00000515058 CC2D2AQ9P2K1 1620 aa27.05■■□□□ 1.92
GDNF-207ENST00000515058 CECR2Q9BXF3 1484 aa27.03■■□□□ 1.92
GDNF-207ENST00000515058 EIF4G1Q04637 1599 aaKnown RBP26.99■■□□□ 1.91
GDNF-207ENST00000515058 NCAPD3P42695 1498 aa26.19■■□□□ 1.78
GDNF-207ENST00000515058 ATAD2BQ9ULI0 1458 aa26.09■■□□□ 1.77
GDNF-207ENST00000515058 DNAJC5Q9H3Z4 198 aa26.03■■□□□ 1.76
GDNF-207ENST00000515058 SMARCA4P51532 1647 aa25.96■■□□□ 1.75
GDNF-207ENST00000515058 SMARCA2P51531 1590 aa25.93■■□□□ 1.74
GDNF-207ENST00000515058 HMGXB3Q12766 1538 aa25.91■■□□□ 1.74
GDNF-207ENST00000515058 CUX2O14529 1486 aa25.85■■□□□ 1.73
GDNF-207ENST00000515058 ERCC6Q03468 1493 aa25.85■■□□□ 1.73
GDNF-207ENST00000515058 BAZ1AQ9NRL2 1556 aaPredicted RBP25.83■■□□□ 1.73
GDNF-207ENST00000515058 BAZ1BQ9UIG0 1483 aaKnown RBP25.77■■□□□ 1.72
GDNF-207ENST00000515058 NESP48681 1621 aa25.77■■□□□ 1.72
GDNF-207ENST00000515058 PEG3Q9GZU2 1588 aa25.75■■□□□ 1.71
GDNF-207ENST00000515058 MROH2BQ7Z745 1585 aa25.7■■□□□ 1.71
GDNF-207ENST00000515058 LAMC3Q9Y6N6 1575 aa25.5■■□□□ 1.67
GDNF-207ENST00000515058 THOC2Q8NI27 1593 aaKnown RBP25.44■■□□□ 1.66
GDNF-207ENST00000515058 PDS5BQ9NTI5 1447 aa25.41■■□□□ 1.66
GDNF-207ENST00000515058 CADPSQ9ULU8 1353 aa25.39■■□□□ 1.65
GDNF-207ENST00000515058 WIZO95785 1651 aa25.31■■□□□ 1.64
GDNF-207ENST00000515058 KIF21AQ7Z4S6 1674 aa25.29■■□□□ 1.64
GDNF-207ENST00000515058 RSF1Q96T23 1441 aaPredicted RBP25.19■■□□□ 1.62
GDNF-207ENST00000515058 MRC2Q9UBG0 1479 aa25.18■■□□□ 1.62
GDNF-207ENST00000515058 WDR62O43379 1518 aa25.12■■□□□ 1.61
GDNF-207ENST00000515058 CFTRP13569 1480 aa25.08■■□□□ 1.6
GDNF-207ENST00000515058 FANCD2Q9BXW9 1451 aa25.06■■□□□ 1.6
GDNF-207ENST00000515058 CEP164Q9UPV0 1460 aa25.05■■□□□ 1.6
GDNF-207ENST00000515058 TOP2AP11388 1531 aaKnown RBP25.01■■□□□ 1.59
GDNF-207ENST00000515058 URB2Q14146 1524 aaKnown RBP24.88■■□□□ 1.57
GDNF-207ENST00000515058 CCDC88BA6NC98 1476 aa24.8■■□□□ 1.56
GDNF-207ENST00000515058 TRIM41Q8WV44 630 aa24.77■■□□□ 1.56
GDNF-207ENST00000515058 OSCARQ8IYS5 282 aa24.73■■□□□ 1.55
GDNF-207ENST00000515058 ZNF608Q9ULD9 1512 aaPredicted RBP24.59■■□□□ 1.53
GDNF-207ENST00000515058 IFT140Q96RY7 1462 aa24.58■■□□□ 1.53
GDNF-207ENST00000515058 TOPBP1Q92547 1522 aa24.57■■□□□ 1.52
GDNF-207ENST00000515058 PRDM2Q13029 1718 aa24.56■■□□□ 1.52
GDNF-207ENST00000515058 ABCC8Q09428 1581 aa24.48■■□□□ 1.51
GDNF-207ENST00000515058 DNMBPQ6XZF7 1577 aa24.43■■□□□ 1.5
GDNF-207ENST00000515058 AQRO60306 1485 aaKnown RBP eCLIP24.37■■□□□ 1.49
GDNF-207ENST00000515058 EIF4G3O43432 1585 aaKnown RBP24.34■■□□□ 1.49
GDNF-207ENST00000515058 TARBP1Q13395 1621 aaKnown RBP24.34■■□□□ 1.49
GDNF-207ENST00000515058 POLA1P09884 1462 aaPredicted RBP24.33■■□□□ 1.49
GDNF-207ENST00000515058 RIMBP3CA6NJZ7 1639 aa24.31■■□□□ 1.48
GDNF-207ENST00000515058 RIMBP3BA6NNM3 1639 aa24.31■■□□□ 1.48
GDNF-207ENST00000515058 RIMBP3Q9UFD9 1639 aa24.31■■□□□ 1.48
GDNF-207ENST00000515058 ARHGEF11O15085 1522 aa24.27■■□□□ 1.48
GDNF-207ENST00000515058 RAD54L2Q9Y4B4 1467 aa24.26■■□□□ 1.47
GDNF-207ENST00000515058 SOGA1O94964 1423 aa24.23■■□□□ 1.47
GDNF-207ENST00000515058 TDRD9Q8NDG6 1382 aaKnown RBP24.22■■□□□ 1.47
GDNF-207ENST00000515058 FBLN2P98095 1184 aa24.18■■□□□ 1.46
GDNF-207ENST00000515058 CYB5RLQ6IPT4 315 aa24.16■■□□□ 1.46
GDNF-207ENST00000515058 FGD5Q6ZNL6 1462 aa24.15■■□□□ 1.46
GDNF-207ENST00000515058 CUX1P39880 1505 aa24.14■■□□□ 1.45
GDNF-207ENST00000515058 CHD1O14646 1710 aa24.11■■□□□ 1.45
GDNF-207ENST00000515058 SNAPC4Q5SXM2 1469 aa24.06■■□□□ 1.44
GDNF-207ENST00000515058 ARAP1Q96P48 1450 aa24.06■■□□□ 1.44
GDNF-207ENST00000515058 WDR97A6NE52 1622 aa24.02■■□□□ 1.44
GDNF-207ENST00000515058 CHMP7Q8WUX9 453 aaPredicted RBP24.01■■□□□ 1.43
GDNF-207ENST00000515058 GRIN2BQ13224 1484 aa24■■□□□ 1.43
GDNF-207ENST00000515058 MAGI1Q96QZ7 1491 aaPredicted RBP24■■□□□ 1.43
GDNF-207ENST00000515058 SUPT5HO00267 1087 aaKnown RBP23.99■■□□□ 1.43
GDNF-207ENST00000515058 CLASP1Q7Z460 1538 aa23.96■■□□□ 1.43
GDNF-207ENST00000515058 SYNJ2O15056 1496 aa23.93■■□□□ 1.42
GDNF-207ENST00000515058 GAPVD1Q14C86 1478 aa23.91■■□□□ 1.42
GDNF-207ENST00000515058 ABCA10Q8WWZ4 1543 aa23.89■■□□□ 1.42
GDNF-207ENST00000515058 SYNJ1O43426 1573 aa23.87■■□□□ 1.41
GDNF-207ENST00000515058 TRHP20396 242 aaPredicted RBP23.84■■□□□ 1.41
GDNF-207ENST00000515058 ABCA5Q8WWZ7 1642 aa23.81■■□□□ 1.4
GDNF-207ENST00000515058 WRNQ14191 1432 aaPredicted RBP eCLIP23.78■■□□□ 1.4
GDNF-207ENST00000515058 PBRM1Q86U86 1689 aa23.75■■□□□ 1.39
GDNF-207ENST00000515058 GRIN2AQ12879 1464 aa23.68■■□□□ 1.38
GDNF-207ENST00000515058 TOP2BQ02880 1626 aa23.68■■□□□ 1.38
GDNF-207ENST00000515058 NUP160Q12769 1436 aa23.66■■□□□ 1.38
GDNF-207ENST00000515058 BIVM-ERCC5R4GMW8 1640 aa23.64■■□□□ 1.38
GDNF-207ENST00000515058 FHAD1B1AJZ9 1412 aa23.62■■□□□ 1.37
GDNF-207ENST00000515058 ADAMTS12P58397 1594 aa23.61■■□□□ 1.37
GDNF-207ENST00000515058 ERCC6L2Q5T890 1561 aa23.61■■□□□ 1.37
GDNF-207ENST00000515058 CEP170Q5SW79 1584 aa23.59■■□□□ 1.37
GDNF-207ENST00000515058 ERICH3Q5RHP9 1530 aa23.55■■□□□ 1.36
GDNF-207ENST00000515058 SHROOM2Q13796 1616 aa23.48■■□□□ 1.35
GDNF-207ENST00000515058 JPH4Q96JJ6 628 aa23.44■■□□□ 1.34
GDNF-207ENST00000515058 PRG4Q92954 1404 aaPredicted RBP23.42■■□□□ 1.34
GDNF-207ENST00000515058 IGF1RP08069 1367 aa23.36■■□□□ 1.33
GDNF-207ENST00000515058 RUSC2Q8N2Y8 1516 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms