RNA–Protein interactions for RNA: ENST00000515051.1

RNF44-208, Transcript of ring finger protein 44, humanhuman

TSL 4

Gene RNF44, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44-208ENST00000515051 NISCHQ9Y2I1 1504 aa30.63■■■□□ 2.49
RNF44-208ENST00000515051 ABCC9O60706 1549 aa27.93■■■□□ 2.06
RNF44-208ENST00000515051 CCDC180Q9P1Z9 1646 aa27.51■■□□□ 1.99
RNF44-208ENST00000515051 DNAJC5BQ9UF47 199 aa26.53■■□□□ 1.84
RNF44-208ENST00000515051 RB1CC1Q8TDY2 1594 aa26.36■■□□□ 1.81
RNF44-208ENST00000515051 NACADO15069 1562 aa26.08■■□□□ 1.77
RNF44-208ENST00000515051 DCAF8L2P0C7V8 631 aa26.07■■□□□ 1.76
RNF44-208ENST00000515051 PABPN1Q86U42 306 aaKnown RBP eCLIP26■■□□□ 1.75
RNF44-208ENST00000515051 UNC13AQ9UPW8 1703 aa25.88■■□□□ 1.73
RNF44-208ENST00000515051 BICRAQ9NZM4 1560 aa25.66■■□□□ 1.7
RNF44-208ENST00000515051 MYO15BQ96JP2 1530 aa25.65■■□□□ 1.7
RNF44-208ENST00000515051 ZCCHC6Q5VYS8 1495 aaKnown RBP25.33■■□□□ 1.65
RNF44-208ENST00000515051 DCAF1Q9Y4B6 1507 aa25.26■■□□□ 1.63
RNF44-208ENST00000515051 CC2D2AQ9P2K1 1620 aa25.19■■□□□ 1.62
RNF44-208ENST00000515051 CECR2Q9BXF3 1484 aa25.15■■□□□ 1.62
RNF44-208ENST00000515051 SCRIBQ14160 1630 aa25.14■■□□□ 1.61
RNF44-208ENST00000515051 SHROOM4Q9ULL8 1493 aa25.11■■□□□ 1.61
RNF44-208ENST00000515051 EIF4G1Q04637 1599 aaKnown RBP25.02■■□□□ 1.6
RNF44-208ENST00000515051 DNAJC5Q9H3Z4 198 aa24.53■■□□□ 1.52
RNF44-208ENST00000515051 NCAPD3P42695 1498 aa24.14■■□□□ 1.46
RNF44-208ENST00000515051 CUX2O14529 1486 aa24.11■■□□□ 1.45
RNF44-208ENST00000515051 ERCC6Q03468 1493 aa24.11■■□□□ 1.45
RNF44-208ENST00000515051 ATAD2BQ9ULI0 1458 aa24.04■■□□□ 1.44
RNF44-208ENST00000515051 NESP48681 1621 aa23.91■■□□□ 1.42
RNF44-208ENST00000515051 SMARCA4P51532 1647 aa23.91■■□□□ 1.42
RNF44-208ENST00000515051 SMARCA2P51531 1590 aa23.89■■□□□ 1.41
RNF44-208ENST00000515051 HMGXB3Q12766 1538 aa23.86■■□□□ 1.41
RNF44-208ENST00000515051 BAZ1BQ9UIG0 1483 aaKnown RBP23.75■■□□□ 1.39
RNF44-208ENST00000515051 PEG3Q9GZU2 1588 aa23.69■■□□□ 1.38
RNF44-208ENST00000515051 BAZ1AQ9NRL2 1556 aaPredicted RBP23.69■■□□□ 1.38
RNF44-208ENST00000515051 THOC2Q8NI27 1593 aaKnown RBP23.67■■□□□ 1.38
RNF44-208ENST00000515051 MROH2BQ7Z745 1585 aa23.65■■□□□ 1.38
RNF44-208ENST00000515051 LAMC3Q9Y6N6 1575 aa23.6■■□□□ 1.37
RNF44-208ENST00000515051 KIF21AQ7Z4S6 1674 aa23.6■■□□□ 1.37
RNF44-208ENST00000515051 PDS5BQ9NTI5 1447 aa23.48■■□□□ 1.35
RNF44-208ENST00000515051 TRIM41Q8WV44 630 aa23.42■■□□□ 1.34
RNF44-208ENST00000515051 CADPSQ9ULU8 1353 aa23.38■■□□□ 1.33
RNF44-208ENST00000515051 MRC2Q9UBG0 1479 aa23.31■■□□□ 1.32
RNF44-208ENST00000515051 WIZO95785 1651 aa23.31■■□□□ 1.32
RNF44-208ENST00000515051 WDR62O43379 1518 aa23.25■■□□□ 1.31
RNF44-208ENST00000515051 CEP164Q9UPV0 1460 aa23.16■■□□□ 1.3
RNF44-208ENST00000515051 FANCD2Q9BXW9 1451 aa23.11■■□□□ 1.29
RNF44-208ENST00000515051 RSF1Q96T23 1441 aaPredicted RBP23.09■■□□□ 1.29
RNF44-208ENST00000515051 CFTRP13569 1480 aa23.07■■□□□ 1.28
RNF44-208ENST00000515051 OSCARQ8IYS5 282 aa23.02■■□□□ 1.28
RNF44-208ENST00000515051 URB2Q14146 1524 aaKnown RBP22.97■■□□□ 1.27
RNF44-208ENST00000515051 TOP2AP11388 1531 aaKnown RBP22.93■■□□□ 1.26
RNF44-208ENST00000515051 PRDM2Q13029 1718 aa22.81■■□□□ 1.24
RNF44-208ENST00000515051 CCDC88BA6NC98 1476 aa22.79■■□□□ 1.24
RNF44-208ENST00000515051 RIMBP3CA6NJZ7 1639 aa22.77■■□□□ 1.24
RNF44-208ENST00000515051 RIMBP3BA6NNM3 1639 aa22.77■■□□□ 1.24
RNF44-208ENST00000515051 RIMBP3Q9UFD9 1639 aa22.77■■□□□ 1.24
RNF44-208ENST00000515051 ZNF608Q9ULD9 1512 aaPredicted RBP22.75■■□□□ 1.23
RNF44-208ENST00000515051 IFT140Q96RY7 1462 aa22.69■■□□□ 1.22
RNF44-208ENST00000515051 TOPBP1Q92547 1522 aa22.65■■□□□ 1.22
RNF44-208ENST00000515051 ARHGEF11O15085 1522 aa22.63■■□□□ 1.21
RNF44-208ENST00000515051 EIF4G3O43432 1585 aaKnown RBP22.58■■□□□ 1.2
RNF44-208ENST00000515051 CYB5RLQ6IPT4 315 aa22.56■■□□□ 1.2
RNF44-208ENST00000515051 CHD1O14646 1710 aa22.54■■□□□ 1.2
RNF44-208ENST00000515051 AQRO60306 1485 aaKnown RBP eCLIP22.52■■□□□ 1.28e-7■□□□□ 11.3
RNF44-208ENST00000515051 ABCC8Q09428 1581 aa22.51■■□□□ 1.19
RNF44-208ENST00000515051 DNMBPQ6XZF7 1577 aa22.51■■□□□ 1.19
RNF44-208ENST00000515051 FBLN2P98095 1184 aa22.48■■□□□ 1.19
RNF44-208ENST00000515051 TARBP1Q13395 1621 aaKnown RBP22.47■■□□□ 1.19
RNF44-208ENST00000515051 TRHP20396 242 aaPredicted RBP22.43■■□□□ 1.18
RNF44-208ENST00000515051 POLA1P09884 1462 aaPredicted RBP22.4■■□□□ 1.18
RNF44-208ENST00000515051 ARAP1Q96P48 1450 aa22.4■■□□□ 1.18
RNF44-208ENST00000515051 RAD54L2Q9Y4B4 1467 aa22.37■■□□□ 1.17
RNF44-208ENST00000515051 TDRD9Q8NDG6 1382 aaKnown RBP22.33■■□□□ 1.17
RNF44-208ENST00000515051 SOGA1O94964 1423 aa22.3■■□□□ 1.16
RNF44-208ENST00000515051 SNAPC4Q5SXM2 1469 aa22.24■■□□□ 1.15
RNF44-208ENST00000515051 FGD5Q6ZNL6 1462 aa22.22■■□□□ 1.15
RNF44-208ENST00000515051 CHMP7Q8WUX9 453 aaPredicted RBP22.21■■□□□ 1.15
RNF44-208ENST00000515051 CUX1P39880 1505 aa22.21■■□□□ 1.15
RNF44-208ENST00000515051 CLASP1Q7Z460 1538 aa22.18■■□□□ 1.14
RNF44-208ENST00000515051 SYNJ1O43426 1573 aa22.15■■□□□ 1.14
RNF44-208ENST00000515051 SUPT5HO00267 1087 aaKnown RBP22.14■■□□□ 1.13
RNF44-208ENST00000515051 WDR97A6NE52 1622 aa22.13■■□□□ 1.13
RNF44-208ENST00000515051 MAGI1Q96QZ7 1491 aaPredicted RBP22.12■■□□□ 1.13
RNF44-208ENST00000515051 GRIN2BQ13224 1484 aa22.1■■□□□ 1.13
RNF44-208ENST00000515051 SYNJ2O15056 1496 aa22.07■■□□□ 1.12
RNF44-208ENST00000515051 PBRM1Q86U86 1689 aa22.05■■□□□ 1.12
RNF44-208ENST00000515051 GAPVD1Q14C86 1478 aa22.01■■□□□ 1.11
RNF44-208ENST00000515051 AEBP2Q6ZN18 517 aaPredicted RBP22■■□□□ 1.11
RNF44-208ENST00000515051 ABCA10Q8WWZ4 1543 aa21.95■■□□□ 1.1
RNF44-208ENST00000515051 ABCA5Q8WWZ7 1642 aa21.91■■□□□ 1.1
RNF44-208ENST00000515051 ERCC6L2Q5T890 1561 aa21.9■■□□□ 1.1
RNF44-208ENST00000515051 GRIN2AQ12879 1464 aa21.83■■□□□ 1.09
RNF44-208ENST00000515051 CEP170Q5SW79 1584 aa21.79■■□□□ 1.08
RNF44-208ENST00000515051 NUP160Q12769 1436 aa21.79■■□□□ 1.08
RNF44-208ENST00000515051 ADAMTS12P58397 1594 aa21.78■■□□□ 1.08
RNF44-208ENST00000515051 WRNQ14191 1432 aaPredicted RBP eCLIP21.76■■□□□ 1.07
RNF44-208ENST00000515051 TOP2BQ02880 1626 aa21.73■■□□□ 1.07
RNF44-208ENST00000515051 BIVM-ERCC5R4GMW8 1640 aa21.71■■□□□ 1.07
RNF44-208ENST00000515051 SHROOM2Q13796 1616 aa21.7■■□□□ 1.06
RNF44-208ENST00000515051 FHAD1B1AJZ9 1412 aa21.7■■□□□ 1.06
RNF44-208ENST00000515051 KIF13AQ9H1H9 1805 aa21.68■■□□□ 1.06
RNF44-208ENST00000515051 ERICH3Q5RHP9 1530 aa21.62■■□□□ 1.05
RNF44-208ENST00000515051 PRG4Q92954 1404 aaPredicted RBP21.62■■□□□ 1.05
RNF44-208ENST00000515051 JPH4Q96JJ6 628 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms