RNA–Protein interactions for RNA: ENST00000515008.1

SIL1-215, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 843 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-215ENST00000515008 NISCHQ9Y2I1 1504 aa43.8■■■■■ 4.6
SIL1-215ENST00000515008 CCDC180Q9P1Z9 1646 aa39.23■■■■□ 3.87
SIL1-215ENST00000515008 ABCC9O60706 1549 aa38.69■■■■□ 3.78
SIL1-215ENST00000515008 RB1CC1Q8TDY2 1594 aa37.11■■■■□ 3.53
SIL1-215ENST00000515008 NACADO15069 1562 aa36.96■■■■□ 3.51
SIL1-215ENST00000515008 MYO15BQ96JP2 1530 aa36.64■■■■□ 3.46
SIL1-215ENST00000515008 DCAF8L2P0C7V8 631 aa36.62■■■■□ 3.45
SIL1-215ENST00000515008 ZCCHC6Q5VYS8 1495 aaKnown RBP36.42■■■■□ 3.42
SIL1-215ENST00000515008 DCAF1Q9Y4B6 1507 aa36.29■■■■□ 3.4
SIL1-215ENST00000515008 UNC13AQ9UPW8 1703 aa36.23■■■■□ 3.39
SIL1-215ENST00000515008 PABPN1Q86U42 306 aaKnown RBP eCLIP36.01■■■■□ 3.36
SIL1-215ENST00000515008 BICRAQ9NZM4 1560 aa35.96■■■■□ 3.35
SIL1-215ENST00000515008 DNAJC5BQ9UF47 199 aa35.86■■■■□ 3.33
SIL1-215ENST00000515008 SHROOM4Q9ULL8 1493 aa35.67■■■■□ 3.3
SIL1-215ENST00000515008 SCRIBQ14160 1630 aa35.66■■■■□ 3.3
SIL1-215ENST00000515008 EIF4G1Q04637 1599 aaKnown RBP35.07■■■■□ 3.2
SIL1-215ENST00000515008 CC2D2AQ9P2K1 1620 aa35.03■■■■□ 3.2
SIL1-215ENST00000515008 CECR2Q9BXF3 1484 aa34.86■■■■□ 3.17
SIL1-215ENST00000515008 SMARCA4P51532 1647 aa34.1■■■■□ 3.05
SIL1-215ENST00000515008 NCAPD3P42695 1498 aa34.08■■■■□ 3.05
SIL1-215ENST00000515008 BAZ1AQ9NRL2 1556 aaPredicted RBP34.02■■■■□ 3.04
SIL1-215ENST00000515008 ATAD2BQ9ULI0 1458 aa34.01■■■■□ 3.04
SIL1-215ENST00000515008 SMARCA2P51531 1590 aa34■■■■□ 3.03
SIL1-215ENST00000515008 HMGXB3Q12766 1538 aa33.92■■■■□ 3.02
SIL1-215ENST00000515008 PEG3Q9GZU2 1588 aa33.81■■■■□ 3
SIL1-215ENST00000515008 BAZ1BQ9UIG0 1483 aaKnown RBP33.72■■■□□ 2.99
SIL1-215ENST00000515008 MROH2BQ7Z745 1585 aa33.71■■■□□ 2.99
SIL1-215ENST00000515008 ERCC6Q03468 1493 aa33.44■■■□□ 2.94
SIL1-215ENST00000515008 NESP48681 1621 aa33.34■■■□□ 2.93
SIL1-215ENST00000515008 WIZO95785 1651 aa33.32■■■□□ 2.92
SIL1-215ENST00000515008 CUX2O14529 1486 aa33.31■■■□□ 2.92
SIL1-215ENST00000515008 LAMC3Q9Y6N6 1575 aa33.29■■■□□ 2.92
SIL1-215ENST00000515008 RSF1Q96T23 1441 aaPredicted RBP33.16■■■□□ 2.9
SIL1-215ENST00000515008 PDS5BQ9NTI5 1447 aa33.06■■■□□ 2.88
SIL1-215ENST00000515008 CADPSQ9ULU8 1353 aa33.04■■■□□ 2.88
SIL1-215ENST00000515008 THOC2Q8NI27 1593 aaKnown RBP33.02■■■□□ 2.88
SIL1-215ENST00000515008 TOP2AP11388 1531 aaKnown RBP33■■■□□ 2.87
SIL1-215ENST00000515008 KIF21AQ7Z4S6 1674 aa32.98■■■□□ 2.87
SIL1-215ENST00000515008 CFTRP13569 1480 aa32.77■■■□□ 2.84
SIL1-215ENST00000515008 MRC2Q9UBG0 1479 aa32.75■■■□□ 2.83
SIL1-215ENST00000515008 DNAJC5Q9H3Z4 198 aa32.74■■■□□ 2.83
SIL1-215ENST00000515008 CEP164Q9UPV0 1460 aa32.69■■■□□ 2.82
SIL1-215ENST00000515008 FANCD2Q9BXW9 1451 aa32.67■■■□□ 2.82
SIL1-215ENST00000515008 WDR62O43379 1518 aa32.67■■■□□ 2.82
SIL1-215ENST00000515008 CCDC88BA6NC98 1476 aa32.55■■■□□ 2.8
SIL1-215ENST00000515008 PRDM2Q13029 1718 aa32.54■■■□□ 2.8
SIL1-215ENST00000515008 URB2Q14146 1524 aaKnown RBP32.36■■■□□ 2.77
SIL1-215ENST00000515008 ABCC8Q09428 1581 aa32.11■■■□□ 2.73
SIL1-215ENST00000515008 TOPBP1Q92547 1522 aa32.1■■■□□ 2.73
SIL1-215ENST00000515008 DNMBPQ6XZF7 1577 aa32.05■■■□□ 2.72
SIL1-215ENST00000515008 IFT140Q96RY7 1462 aa32.03■■■□□ 2.72
SIL1-215ENST00000515008 ZNF608Q9ULD9 1512 aaPredicted RBP31.87■■■□□ 2.69
SIL1-215ENST00000515008 SUPT5HO00267 1087 aaKnown RBP31.86■■■□□ 2.69
SIL1-215ENST00000515008 POLA1P09884 1462 aaPredicted RBP31.79■■■□□ 2.68
SIL1-215ENST00000515008 TARBP1Q13395 1621 aaKnown RBP31.79■■■□□ 2.68
SIL1-215ENST00000515008 EIF4G3O43432 1585 aaKnown RBP31.78■■■□□ 2.68
SIL1-215ENST00000515008 OSCARQ8IYS5 282 aa31.75■■■□□ 2.67
SIL1-215ENST00000515008 CUX1P39880 1505 aa31.67■■■□□ 2.66
SIL1-215ENST00000515008 FGD5Q6ZNL6 1462 aa31.64■■■□□ 2.66
SIL1-215ENST00000515008 SOGA1O94964 1423 aa31.63■■■□□ 2.65
SIL1-215ENST00000515008 WDR97A6NE52 1622 aa31.61■■■□□ 2.65
SIL1-215ENST00000515008 AQRO60306 1485 aaKnown RBP eCLIP31.61■■■□□ 2.651e-12■■■■■ 28.7
SIL1-215ENST00000515008 RAD54L2Q9Y4B4 1467 aa31.6■■■□□ 2.65
SIL1-215ENST00000515008 TDRD9Q8NDG6 1382 aaKnown RBP31.47■■■□□ 2.63
SIL1-215ENST00000515008 CHD1O14646 1710 aa31.46■■■□□ 2.63
SIL1-215ENST00000515008 TRIM41Q8WV44 630 aa31.39■■■□□ 2.62
SIL1-215ENST00000515008 GRIN2BQ13224 1484 aa31.36■■■□□ 2.61
SIL1-215ENST00000515008 SNAPC4Q5SXM2 1469 aa31.36■■■□□ 2.61
SIL1-215ENST00000515008 MAGI1Q96QZ7 1491 aaPredicted RBP31.35■■■□□ 2.61
SIL1-215ENST00000515008 ABCA10Q8WWZ4 1543 aa31.34■■■□□ 2.61
SIL1-215ENST00000515008 RIMBP3CA6NJZ7 1639 aa31.33■■■□□ 2.61
SIL1-215ENST00000515008 RIMBP3BA6NNM3 1639 aa31.33■■■□□ 2.61
SIL1-215ENST00000515008 RIMBP3Q9UFD9 1639 aa31.33■■■□□ 2.61
SIL1-215ENST00000515008 BIVM-ERCC5R4GMW8 1640 aa31.32■■■□□ 2.6
SIL1-215ENST00000515008 TOP2BQ02880 1626 aa31.31■■■□□ 2.6
SIL1-215ENST00000515008 WRNQ14191 1432 aaPredicted RBP eCLIP31.3■■■□□ 2.6
SIL1-215ENST00000515008 ARHGEF11O15085 1522 aa31.29■■■□□ 2.6
SIL1-215ENST00000515008 FBLN2P98095 1184 aa31.28■■■□□ 2.6
SIL1-215ENST00000515008 GAPVD1Q14C86 1478 aa31.27■■■□□ 2.6
SIL1-215ENST00000515008 PBRM1Q86U86 1689 aa31.27■■■□□ 2.6
SIL1-215ENST00000515008 ABCA5Q8WWZ7 1642 aa31.27■■■□□ 2.6
SIL1-215ENST00000515008 SYNJ1O43426 1573 aa31.24■■■□□ 2.59
SIL1-215ENST00000515008 SYNJ2O15056 1496 aa31.21■■■□□ 2.59
SIL1-215ENST00000515008 CHMP7Q8WUX9 453 aaPredicted RBP31.17■■■□□ 2.58
SIL1-215ENST00000515008 CLASP1Q7Z460 1538 aa31.14■■■□□ 2.57
SIL1-215ENST00000515008 ADAMTS12P58397 1594 aa31■■■□□ 2.55
SIL1-215ENST00000515008 ARAP1Q96P48 1450 aa31■■■□□ 2.55
SIL1-215ENST00000515008 ERICH3Q5RHP9 1530 aa30.98■■■□□ 2.55
SIL1-215ENST00000515008 GRIN2AQ12879 1464 aa30.95■■■□□ 2.54
SIL1-215ENST00000515008 CYB5RLQ6IPT4 315 aa30.93■■■□□ 2.54
SIL1-215ENST00000515008 FHAD1B1AJZ9 1412 aa30.92■■■□□ 2.54
SIL1-215ENST00000515008 NUP160Q12769 1436 aa30.84■■■□□ 2.53
SIL1-215ENST00000515008 CEP170Q5SW79 1584 aa30.79■■■□□ 2.52
SIL1-215ENST00000515008 KIF27Q86VH2 1401 aa30.69■■■□□ 2.5
SIL1-215ENST00000515008 SHROOM2Q13796 1616 aa30.68■■■□□ 2.5
SIL1-215ENST00000515008 CUL7Q14999 1698 aa30.62■■■□□ 2.49
SIL1-215ENST00000515008 ERCC6L2Q5T890 1561 aa30.58■■■□□ 2.49
SIL1-215ENST00000515008 IGF1RP08069 1367 aa30.58■■■□□ 2.49
SIL1-215ENST00000515008 RUSC2Q8N2Y8 1516 aa30.56■■■□□ 2.48
SIL1-215ENST00000515008 PRG4Q92954 1404 aaPredicted RBP30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms