RNA–Protein interactions for RNA: ENST00000514995.1

DDX60-206, Transcript of DExD/H-box helicase 60, humanhuman

TSL 4

Gene DDX60, Length 534 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-206ENST00000514995 AEBP2Q6ZN18 517 aaPredicted RBP20.33■□□□□ 0.85
DDX60-206ENST00000514995 CHIC1Q5VXU3 224 aa19.73■□□□□ 0.75
DDX60-206ENST00000514995 NISCHQ9Y2I1 1504 aa19.7■□□□□ 0.74
DDX60-206ENST00000514995 CCDC180Q9P1Z9 1646 aa17.56■□□□□ 0.4
DDX60-206ENST00000514995 PHF23Q9BUL5 403 aaPredicted RBP17.36■□□□□ 0.37
DDX60-206ENST00000514995 SENP3Q9H4L4 574 aaPredicted RBP17.25■□□□□ 0.35
DDX60-206ENST00000514995 ABCC9O60706 1549 aa16.86■□□□□ 0.29
DDX60-206ENST00000514995 ZCCHC6Q5VYS8 1495 aaKnown RBP16.5■□□□□ 0.23
DDX60-206ENST00000514995 NACADO15069 1562 aa16.34■□□□□ 0.21
DDX60-206ENST00000514995 RB1CC1Q8TDY2 1594 aa16.34■□□□□ 0.21
DDX60-206ENST00000514995 DCAF1Q9Y4B6 1507 aa16.31■□□□□ 0.2
DDX60-206ENST00000514995 MYO15BQ96JP2 1530 aa16.28■□□□□ 0.2
DDX60-206ENST00000514995 DCAF8L2P0C7V8 631 aa16.21■□□□□ 0.19
DDX60-206ENST00000514995 UNC13AQ9UPW8 1703 aa16.16■□□□□ 0.18
DDX60-206ENST00000514995 FOXD1Q16676 465 aa16.03■□□□□ 0.16
DDX60-206ENST00000514995 SCRIBQ14160 1630 aa16.03■□□□□ 0.16
DDX60-206ENST00000514995 PLPPR3Q6T4P5 718 aa15.98■□□□□ 0.15
DDX60-206ENST00000514995 BICRAQ9NZM4 1560 aa15.86■□□□□ 0.13
DDX60-206ENST00000514995 SHROOM4Q9ULL8 1493 aa15.67■□□□□ 0.1
DDX60-206ENST00000514995 PABPN1Q86U42 306 aaKnown RBP eCLIP15.67■□□□□ 0.1
DDX60-206ENST00000514995 EIF4G1Q04637 1599 aaKnown RBP15.41■□□□□ 0.06
DDX60-206ENST00000514995 ADRA2BP18089 450 aa15.36■□□□□ 0.05
DDX60-206ENST00000514995 PPP6R1Q9UPN7 881 aa15.36■□□□□ 0.05
DDX60-206ENST00000514995 SMARCA4P51532 1647 aa15.32■□□□□ 0.04
DDX60-206ENST00000514995 CC2D2AQ9P2K1 1620 aa15.32■□□□□ 0.04
DDX60-206ENST00000514995 CECR2Q9BXF3 1484 aa15.31■□□□□ 0.04
DDX60-206ENST00000514995 BAZ1AQ9NRL2 1556 aaPredicted RBP15.28■□□□□ 0.04
DDX60-206ENST00000514995 MROH2BQ7Z745 1585 aa15.2■□□□□ 0.02
DDX60-206ENST00000514995 DNAJC5BQ9UF47 199 aa15.14■□□□□ 0.01
DDX60-206ENST00000514995 PEG3Q9GZU2 1588 aa15.14■□□□□ 0.01
DDX60-206ENST00000514995 WIZO95785 1651 aa15.12■□□□□ 0.01
DDX60-206ENST00000514995 PIAS4Q8N2W9 510 aaPredicted RBP15.12■□□□□ 0.01
DDX60-206ENST00000514995 SMARCA2P51531 1590 aa15.11■□□□□ 0.01
DDX60-206ENST00000514995 ATAD2BQ9ULI0 1458 aa15.08■□□□□ 0.01
DDX60-206ENST00000514995 HMGXB3Q12766 1538 aa15.07■□□□□ 0
DDX60-206ENST00000514995 RSF1Q96T23 1441 aaPredicted RBP15.04■□□□□ -0
DDX60-206ENST00000514995 BAZ1BQ9UIG0 1483 aaKnown RBP15.01□□□□□ -0.01
DDX60-206ENST00000514995 NCAPD3P42695 1498 aa15□□□□□ -0.01
DDX60-206ENST00000514995 TOP2AP11388 1531 aaKnown RBP14.95□□□□□ -0.02
DDX60-206ENST00000514995 MSH5O43196 834 aa14.81□□□□□ -0.04
DDX60-206ENST00000514995 SUPT5HO00267 1087 aaKnown RBP14.75□□□□□ -0.05
DDX60-206ENST00000514995 PRDM2Q13029 1718 aa14.75□□□□□ -0.05
DDX60-206ENST00000514995 CCDC88BA6NC98 1476 aa14.69□□□□□ -0.06
DDX60-206ENST00000514995 LAMC3Q9Y6N6 1575 aa14.68□□□□□ -0.06
DDX60-206ENST00000514995 NESP48681 1621 aa14.66□□□□□ -0.06
DDX60-206ENST00000514995 KIF21AQ7Z4S6 1674 aa14.64□□□□□ -0.07
DDX60-206ENST00000514995 CFTRP13569 1480 aa14.57□□□□□ -0.08
DDX60-206ENST00000514995 CADPSQ9ULU8 1353 aa14.55□□□□□ -0.08
DDX60-206ENST00000514995 ERCC6Q03468 1493 aa14.5□□□□□ -0.09
DDX60-206ENST00000514995 THOC2Q8NI27 1593 aaKnown RBP14.5□□□□□ -0.09
DDX60-206ENST00000514995 FANCD2Q9BXW9 1451 aa14.47□□□□□ -0.09
DDX60-206ENST00000514995 PDS5BQ9NTI5 1447 aa14.46□□□□□ -0.09
DDX60-206ENST00000514995 CEP164Q9UPV0 1460 aa14.45□□□□□ -0.1
DDX60-206ENST00000514995 MRC2Q9UBG0 1479 aa14.38□□□□□ -0.11
DDX60-206ENST00000514995 WDR62O43379 1518 aa14.37□□□□□ -0.11
DDX60-206ENST00000514995 URB2Q14146 1524 aaKnown RBP14.34□□□□□ -0.11
DDX60-206ENST00000514995 DNMBPQ6XZF7 1577 aa14.33□□□□□ -0.12
DDX60-206ENST00000514995 ABCC8Q09428 1581 aa14.31□□□□□ -0.12
DDX60-206ENST00000514995 TOPBP1Q92547 1522 aa14.28□□□□□ -0.12
DDX60-206ENST00000514995 BIVM-ERCC5R4GMW8 1640 aa14.27□□□□□ -0.12
DDX60-206ENST00000514995 CUX1P39880 1505 aa14.27□□□□□ -0.12
DDX60-206ENST00000514995 SYNJ1O43426 1573 aa14.26□□□□□ -0.13
DDX60-206ENST00000514995 CUX2O14529 1486 aa14.26□□□□□ -0.13
DDX60-206ENST00000514995 TOP2BQ02880 1626 aa14.23□□□□□ -0.13
DDX60-206ENST00000514995 WDR97A6NE52 1622 aa14.2□□□□□ -0.14
DDX60-206ENST00000514995 WRNQ14191 1432 aaPredicted RBP eCLIP14.19□□□□□ -0.14
DDX60-206ENST00000514995 FGD5Q6ZNL6 1462 aa14.18□□□□□ -0.14
DDX60-206ENST00000514995 POLA1P09884 1462 aaPredicted RBP14.17□□□□□ -0.14
DDX60-206ENST00000514995 TARBP1Q13395 1621 aaKnown RBP14.16□□□□□ -0.14
DDX60-206ENST00000514995 EIF4G3O43432 1585 aaKnown RBP14.12□□□□□ -0.15
DDX60-206ENST00000514995 IFT140Q96RY7 1462 aa14.1□□□□□ -0.15
DDX60-206ENST00000514995 PBRM1Q86U86 1689 aa14.08□□□□□ -0.16
DDX60-206ENST00000514995 RAD54L2Q9Y4B4 1467 aa14.08□□□□□ -0.16
DDX60-206ENST00000514995 PPP4R3CPQ6ZMV5 832 aa14.08□□□□□ -0.16
DDX60-206ENST00000514995 ABCA5Q8WWZ7 1642 aa14.05□□□□□ -0.16
DDX60-206ENST00000514995 ZNF608Q9ULD9 1512 aaPredicted RBP14.05□□□□□ -0.16
DDX60-206ENST00000514995 SOGA1O94964 1423 aa14.03□□□□□ -0.16
DDX60-206ENST00000514995 ABCA10Q8WWZ4 1543 aa14.03□□□□□ -0.16
DDX60-206ENST00000514995 SCAF1Q9H7N4 1312 aaKnown RBP14.01□□□□□ -0.17
DDX60-206ENST00000514995 MAPK8IP2Q13387 824 aaPredicted RBP13.97□□□□□ -0.17
DDX60-206ENST00000514995 CHD1O14646 1710 aa13.95□□□□□ -0.18
DDX60-206ENST00000514995 AQRO60306 1485 aaKnown RBP eCLIP13.94□□□□□ -0.18
DDX60-206ENST00000514995 GAPVD1Q14C86 1478 aa13.93□□□□□ -0.18
DDX60-206ENST00000514995 TDRD9Q8NDG6 1382 aaKnown RBP13.92□□□□□ -0.18
DDX60-206ENST00000514995 ADAMTS12P58397 1594 aa13.92□□□□□ -0.18
DDX60-206ENST00000514995 TRIM41Q8WV44 630 aa13.9□□□□□ -0.18
DDX60-206ENST00000514995 GRIN2BQ13224 1484 aa13.89□□□□□ -0.19
DDX60-206ENST00000514995 SNAPC4Q5SXM2 1469 aa13.89□□□□□ -0.19
DDX60-206ENST00000514995 ERICH3Q5RHP9 1530 aa13.88□□□□□ -0.19
DDX60-206ENST00000514995 CUL7Q14999 1698 aa13.88□□□□□ -0.19
DDX60-206ENST00000514995 KIF27Q86VH2 1401 aa13.86□□□□□ -0.19
DDX60-206ENST00000514995 MAGI1Q96QZ7 1491 aaPredicted RBP13.86□□□□□ -0.19
DDX60-206ENST00000514995 RUSC2Q8N2Y8 1516 aa13.84□□□□□ -0.19
DDX60-206ENST00000514995 SYNJ2O15056 1496 aa13.79□□□□□ -0.2
DDX60-206ENST00000514995 DMRT2Q9Y5R5 561 aa13.75□□□□□ -0.21
DDX60-206ENST00000514995 GRIN2AQ12879 1464 aa13.74□□□□□ -0.21
DDX60-206ENST00000514995 FHAD1B1AJZ9 1412 aa13.74□□□□□ -0.21
DDX60-206ENST00000514995 EEA1Q15075 1411 aa13.73□□□□□ -0.21
DDX60-206ENST00000514995 CTTNBP2Q8WZ74 1663 aa13.73□□□□□ -0.21
DDX60-206ENST00000514995 CEP170Q5SW79 1584 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms