RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 NISCHQ9Y2I1 1504 aa36.82■■■■□ 3.48
SGCA-211ENST00000514934 CCDC180Q9P1Z9 1646 aa33■■■□□ 2.87
SGCA-211ENST00000514934 ABCC9O60706 1549 aa32.46■■■□□ 2.79
SGCA-211ENST00000514934 RB1CC1Q8TDY2 1594 aa31.1■■■□□ 2.57
SGCA-211ENST00000514934 NACADO15069 1562 aa31■■■□□ 2.55
SGCA-211ENST00000514934 MYO15BQ96JP2 1530 aa30.76■■■□□ 2.51
SGCA-211ENST00000514934 UNC13AQ9UPW8 1703 aa30.69■■■□□ 2.5
SGCA-211ENST00000514934 ZCCHC6Q5VYS8 1495 aaKnown RBP30.63■■■□□ 2.49
SGCA-211ENST00000514934 DCAF8L2P0C7V8 631 aa30.52■■■□□ 2.48
SGCA-211ENST00000514934 DCAF1Q9Y4B6 1507 aa30.49■■■□□ 2.47
SGCA-211ENST00000514934 BICRAQ9NZM4 1560 aa30.37■■■□□ 2.45
SGCA-211ENST00000514934 DNAJC5BQ9UF47 199 aa30.24■■■□□ 2.43
SGCA-211ENST00000514934 PABPN1Q86U42 306 aaKnown RBP eCLIP30.18■■■□□ 2.42
SGCA-211ENST00000514934 SCRIBQ14160 1630 aa29.97■■■□□ 2.39
SGCA-211ENST00000514934 SHROOM4Q9ULL8 1493 aa29.87■■■□□ 2.37
SGCA-211ENST00000514934 EIF4G1Q04637 1599 aaKnown RBP29.47■■■□□ 2.31
SGCA-211ENST00000514934 CC2D2AQ9P2K1 1620 aa29.45■■■□□ 2.31
SGCA-211ENST00000514934 CECR2Q9BXF3 1484 aa29.21■■■□□ 2.27
SGCA-211ENST00000514934 SMARCA4P51532 1647 aa28.69■■■□□ 2.18
SGCA-211ENST00000514934 NCAPD3P42695 1498 aa28.61■■■□□ 2.17
SGCA-211ENST00000514934 ATAD2BQ9ULI0 1458 aa28.57■■■□□ 2.16
SGCA-211ENST00000514934 BAZ1AQ9NRL2 1556 aaPredicted RBP28.52■■■□□ 2.16
SGCA-211ENST00000514934 SMARCA2P51531 1590 aa28.49■■■□□ 2.15
SGCA-211ENST00000514934 HMGXB3Q12766 1538 aa28.48■■■□□ 2.15
SGCA-211ENST00000514934 PEG3Q9GZU2 1588 aa28.47■■■□□ 2.15
SGCA-211ENST00000514934 MROH2BQ7Z745 1585 aa28.39■■■□□ 2.14
SGCA-211ENST00000514934 BAZ1BQ9UIG0 1483 aaKnown RBP28.23■■■□□ 2.11
SGCA-211ENST00000514934 WIZO95785 1651 aa28.1■■■□□ 2.09
SGCA-211ENST00000514934 NESP48681 1621 aa28.06■■■□□ 2.08
SGCA-211ENST00000514934 DNAJC5Q9H3Z4 198 aa28.02■■■□□ 2.08
SGCA-211ENST00000514934 LAMC3Q9Y6N6 1575 aa27.92■■■□□ 2.06
SGCA-211ENST00000514934 ERCC6Q03468 1493 aa27.89■■■□□ 2.06
SGCA-211ENST00000514934 RSF1Q96T23 1441 aaPredicted RBP27.87■■■□□ 2.05
SGCA-211ENST00000514934 CUX2O14529 1486 aa27.87■■■□□ 2.05
SGCA-211ENST00000514934 KIF21AQ7Z4S6 1674 aa27.83■■■□□ 2.05
SGCA-211ENST00000514934 THOC2Q8NI27 1593 aaKnown RBP27.82■■■□□ 2.04
SGCA-211ENST00000514934 TOP2AP11388 1531 aaKnown RBP27.72■■■□□ 2.03
SGCA-211ENST00000514934 CADPSQ9ULU8 1353 aa27.67■■■□□ 2.02
SGCA-211ENST00000514934 PDS5BQ9NTI5 1447 aa27.6■■■□□ 2.01
SGCA-211ENST00000514934 CFTRP13569 1480 aa27.51■■□□□ 1.99
SGCA-211ENST00000514934 PRDM2Q13029 1718 aa27.47■■□□□ 1.99
SGCA-211ENST00000514934 WDR62O43379 1518 aa27.46■■□□□ 1.99
SGCA-211ENST00000514934 MRC2Q9UBG0 1479 aa27.44■■□□□ 1.98
SGCA-211ENST00000514934 FANCD2Q9BXW9 1451 aa27.38■■□□□ 1.97
SGCA-211ENST00000514934 CCDC88BA6NC98 1476 aa27.37■■□□□ 1.97
SGCA-211ENST00000514934 CEP164Q9UPV0 1460 aa27.36■■□□□ 1.97
SGCA-211ENST00000514934 URB2Q14146 1524 aaKnown RBP27.22■■□□□ 1.95
SGCA-211ENST00000514934 TOPBP1Q92547 1522 aa26.96■■□□□ 1.91
SGCA-211ENST00000514934 DNMBPQ6XZF7 1577 aa26.91■■□□□ 1.9
SGCA-211ENST00000514934 ABCC8Q09428 1581 aa26.84■■□□□ 1.89
SGCA-211ENST00000514934 IFT140Q96RY7 1462 aa26.81■■□□□ 1.88
SGCA-211ENST00000514934 ZNF608Q9ULD9 1512 aaPredicted RBP26.8■■□□□ 1.88
SGCA-211ENST00000514934 TARBP1Q13395 1621 aaKnown RBP26.8■■□□□ 1.88
SGCA-211ENST00000514934 EIF4G3O43432 1585 aaKnown RBP26.72■■□□□ 1.87
SGCA-211ENST00000514934 POLA1P09884 1462 aaPredicted RBP26.7■■□□□ 1.87
SGCA-211ENST00000514934 CUX1P39880 1505 aa26.66■■□□□ 1.86
SGCA-211ENST00000514934 SUPT5HO00267 1087 aaKnown RBP26.62■■□□□ 1.85
SGCA-211ENST00000514934 TRIM41Q8WV44 630 aa26.58■■□□□ 1.85
SGCA-211ENST00000514934 WDR97A6NE52 1622 aa26.57■■□□□ 1.84
SGCA-211ENST00000514934 FGD5Q6ZNL6 1462 aa26.56■■□□□ 1.84
SGCA-211ENST00000514934 RAD54L2Q9Y4B4 1467 aa26.56■■□□□ 1.84
SGCA-211ENST00000514934 AQRO60306 1485 aaKnown RBP eCLIP26.53■■□□□ 1.84
SGCA-211ENST00000514934 CHD1O14646 1710 aa26.52■■□□□ 1.84
SGCA-211ENST00000514934 OSCARQ8IYS5 282 aa26.47■■□□□ 1.83
SGCA-211ENST00000514934 SOGA1O94964 1423 aa26.47■■□□□ 1.83
SGCA-211ENST00000514934 BIVM-ERCC5R4GMW8 1640 aa26.39■■□□□ 1.81
SGCA-211ENST00000514934 TDRD9Q8NDG6 1382 aaKnown RBP26.37■■□□□ 1.81
SGCA-211ENST00000514934 RIMBP3CA6NJZ7 1639 aa26.35■■□□□ 1.81
SGCA-211ENST00000514934 RIMBP3BA6NNM3 1639 aa26.35■■□□□ 1.81
SGCA-211ENST00000514934 RIMBP3Q9UFD9 1639 aa26.35■■□□□ 1.81
SGCA-211ENST00000514934 PBRM1Q86U86 1689 aa26.34■■□□□ 1.81
SGCA-211ENST00000514934 ABCA5Q8WWZ7 1642 aa26.34■■□□□ 1.81
SGCA-211ENST00000514934 SYNJ1O43426 1573 aa26.33■■□□□ 1.8
SGCA-211ENST00000514934 TOP2BQ02880 1626 aa26.32■■□□□ 1.8
SGCA-211ENST00000514934 ABCA10Q8WWZ4 1543 aa26.3■■□□□ 1.8
SGCA-211ENST00000514934 SNAPC4Q5SXM2 1469 aa26.3■■□□□ 1.8
SGCA-211ENST00000514934 ARHGEF11O15085 1522 aa26.25■■□□□ 1.79
SGCA-211ENST00000514934 MAGI1Q96QZ7 1491 aaPredicted RBP26.25■■□□□ 1.79
SGCA-211ENST00000514934 GRIN2BQ13224 1484 aa26.24■■□□□ 1.79
SGCA-211ENST00000514934 WRNQ14191 1432 aaPredicted RBP eCLIP26.21■■□□□ 1.79
SGCA-211ENST00000514934 CLASP1Q7Z460 1538 aa26.2■■□□□ 1.79
SGCA-211ENST00000514934 GAPVD1Q14C86 1478 aa26.2■■□□□ 1.78
SGCA-211ENST00000514934 SYNJ2O15056 1496 aa26.14■■□□□ 1.78
SGCA-211ENST00000514934 ADAMTS12P58397 1594 aa26.07■■□□□ 1.76
SGCA-211ENST00000514934 FBLN2P98095 1184 aa26.05■■□□□ 1.76
SGCA-211ENST00000514934 ARAP1Q96P48 1450 aa26.04■■□□□ 1.76
SGCA-211ENST00000514934 ERICH3Q5RHP9 1530 aa25.98■■□□□ 1.75
SGCA-211ENST00000514934 CHMP7Q8WUX9 453 aaPredicted RBP25.97■■□□□ 1.75
SGCA-211ENST00000514934 GRIN2AQ12879 1464 aa25.96■■□□□ 1.75
SGCA-211ENST00000514934 CEP170Q5SW79 1584 aa25.93■■□□□ 1.74
SGCA-211ENST00000514934 NUP160Q12769 1436 aa25.89■■□□□ 1.74
SGCA-211ENST00000514934 FHAD1B1AJZ9 1412 aa25.87■■□□□ 1.73
SGCA-211ENST00000514934 SHROOM2Q13796 1616 aa25.85■■□□□ 1.73
SGCA-211ENST00000514934 CYB5RLQ6IPT4 315 aa25.82■■□□□ 1.72
SGCA-211ENST00000514934 ERCC6L2Q5T890 1561 aa25.82■■□□□ 1.72
SGCA-211ENST00000514934 RUSC2Q8N2Y8 1516 aa25.71■■□□□ 1.71
SGCA-211ENST00000514934 CUL7Q14999 1698 aa25.69■■□□□ 1.7
SGCA-211ENST00000514934 IGF1RP08069 1367 aa25.67■■□□□ 1.7
SGCA-211ENST00000514934 KIF27Q86VH2 1401 aa25.65■■□□□ 1.7
SGCA-211ENST00000514934 PRG4Q92954 1404 aaPredicted RBP25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms