RNA–Protein interactions for RNA: ENST00000514891.5

SLC41A3-222, Transcript of solute carrier family 41 member 3, human

TSL 4

Gene SLC41A3, Length 530 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC41A3-222	ENST00000514891	NISCH	Q9Y2I1	1504 aa		44.34	■■■■■ 4.69
SLC41A3-222	ENST00000514891	CCDC180	Q9P1Z9	1646 aa		39.47	■■■■□ 3.91
SLC41A3-222	ENST00000514891	ABCC9	O60706	1549 aa		39.28	■■■■□ 3.88
SLC41A3-222	ENST00000514891	DCAF8L2	P0C7V8	631 aa		37.5	■■■■□ 3.59
SLC41A3-222	ENST00000514891	RB1CC1	Q8TDY2	1594 aa		37.42	■■■■□ 3.58
SLC41A3-222	ENST00000514891	NACAD	O15069	1562 aa		37.25	■■■■□ 3.55
SLC41A3-222	ENST00000514891	ZCCHC6	Q5VYS8	1495 aa	Known RBP	36.82	■■■■□ 3.49
SLC41A3-222	ENST00000514891	MYO15B	Q96JP2	1530 aa		36.8	■■■■□ 3.48
SLC41A3-222	ENST00000514891	PABPN1	Q86U42	306 aa	Known RBP eCLIP	36.74	■■■■□ 3.47
SLC41A3-222	ENST00000514891	UNC13A	Q9UPW8	1703 aa		36.63	■■■■□ 3.45
SLC41A3-222	ENST00000514891	DCAF1	Q9Y4B6	1507 aa		36.54	■■■■□ 3.44
SLC41A3-222	ENST00000514891	DNAJC5B	Q9UF47	199 aa		36.52	■■■■□ 3.44
SLC41A3-222	ENST00000514891	BICRA	Q9NZM4	1560 aa		36.38	■■■■□ 3.41
SLC41A3-222	ENST00000514891	SCRIB	Q14160	1630 aa		36.19	■■■■□ 3.38
SLC41A3-222	ENST00000514891	SHROOM4	Q9ULL8	1493 aa		35.72	■■■■□ 3.31
SLC41A3-222	ENST00000514891	EIF4G1	Q04637	1599 aa	Known RBP	35.42	■■■■□ 3.26
SLC41A3-222	ENST00000514891	CC2D2A	Q9P2K1	1620 aa		35.42	■■■■□ 3.26
SLC41A3-222	ENST00000514891	CECR2	Q9BXF3	1484 aa		35.26	■■■■□ 3.23
SLC41A3-222	ENST00000514891	SMARCA4	P51532	1647 aa		34.49	■■■■□ 3.11
SLC41A3-222	ENST00000514891	ATAD2B	Q9ULI0	1458 aa		34.43	■■■■□ 3.1
SLC41A3-222	ENST00000514891	NCAPD3	P42695	1498 aa		34.42	■■■■□ 3.1
SLC41A3-222	ENST00000514891	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	34.35	■■■■□ 3.09
SLC41A3-222	ENST00000514891	SMARCA2	P51531	1590 aa		34.28	■■■■□ 3.08
SLC41A3-222	ENST00000514891	MROH2B	Q7Z745	1585 aa		34.25	■■■■□ 3.07
SLC41A3-222	ENST00000514891	HMGXB3	Q12766	1538 aa		34.16	■■■■□ 3.06
SLC41A3-222	ENST00000514891	BAZ1B	Q9UIG0	1483 aa	Known RBP	34.13	■■■■□ 3.05
SLC41A3-222	ENST00000514891	PEG3	Q9GZU2	1588 aa		34.06	■■■■□ 3.04
SLC41A3-222	ENST00000514891	NES	P48681	1621 aa		33.89	■■■■□ 3.02
SLC41A3-222	ENST00000514891	WIZ	O95785	1651 aa		33.87	■■■■□ 3.01
SLC41A3-222	ENST00000514891	ERCC6	Q03468	1493 aa		33.82	■■■■□ 3
SLC41A3-222	ENST00000514891	RSF1	Q96T23	1441 aa	Predicted RBP	33.7	■■■□□ 2.98
SLC41A3-222	ENST00000514891	LAMC3	Q9Y6N6	1575 aa		33.54	■■■□□ 2.96
SLC41A3-222	ENST00000514891	CUX2	O14529	1486 aa		33.49	■■■□□ 2.95
SLC41A3-222	ENST00000514891	CADPS	Q9ULU8	1353 aa		33.45	■■■□□ 2.94
SLC41A3-222	ENST00000514891	KIF21A	Q7Z4S6	1674 aa		33.38	■■■□□ 2.93
SLC41A3-222	ENST00000514891	TOP2A	P11388	1531 aa	Known RBP	33.38	■■■□□ 2.93
SLC41A3-222	ENST00000514891	PDS5B	Q9NTI5	1447 aa		33.37	■■■□□ 2.93
SLC41A3-222	ENST00000514891	THOC2	Q8NI27	1593 aa	Known RBP	33.31	■■■□□ 2.92
SLC41A3-222	ENST00000514891	CFTR	P13569	1480 aa		33.13	■■■□□ 2.89
SLC41A3-222	ENST00000514891	CCDC88B	A6NC98	1476 aa		33.08	■■■□□ 2.89
SLC41A3-222	ENST00000514891	FANCD2	Q9BXW9	1451 aa		33.08	■■■□□ 2.89
SLC41A3-222	ENST00000514891	MRC2	Q9UBG0	1479 aa		33.08	■■■□□ 2.89
SLC41A3-222	ENST00000514891	DNAJC5	Q9H3Z4	198 aa		33.08	■■■□□ 2.89
SLC41A3-222	ENST00000514891	CEP164	Q9UPV0	1460 aa		33.04	■■■□□ 2.88
SLC41A3-222	ENST00000514891	WDR62	O43379	1518 aa		32.95	■■■□□ 2.87
SLC41A3-222	ENST00000514891	URB2	Q14146	1524 aa	Known RBP	32.8	■■■□□ 2.84
SLC41A3-222	ENST00000514891	PRDM2	Q13029	1718 aa		32.76	■■■□□ 2.83
SLC41A3-222	ENST00000514891	SUPT5H	O00267	1087 aa	Known RBP	32.73	■■■□□ 2.83
SLC41A3-222	ENST00000514891	TOPBP1	Q92547	1522 aa		32.5	■■■□□ 2.79
SLC41A3-222	ENST00000514891	DNMBP	Q6XZF7	1577 aa		32.37	■■■□□ 2.77
SLC41A3-222	ENST00000514891	ABCC8	Q09428	1581 aa		32.36	■■■□□ 2.77
SLC41A3-222	ENST00000514891	ZNF608	Q9ULD9	1512 aa	Predicted RBP	32.36	■■■□□ 2.77
SLC41A3-222	ENST00000514891	IFT140	Q96RY7	1462 aa		32.35	■■■□□ 2.77
SLC41A3-222	ENST00000514891	POLA1	P09884	1462 aa	Predicted RBP	32.2	■■■□□ 2.75
SLC41A3-222	ENST00000514891	RAD54L2	Q9Y4B4	1467 aa		32.16	■■■□□ 2.74
SLC41A3-222	ENST00000514891	OSCAR	Q8IYS5	282 aa		32.16	■■■□□ 2.74
SLC41A3-222	ENST00000514891	AQR	O60306	1485 aa	Known RBP eCLIP	32.15	■■■□□ 2.74
SLC41A3-222	ENST00000514891	TARBP1	Q13395	1621 aa	Known RBP	32.15	■■■□□ 2.74
SLC41A3-222	ENST00000514891	CUX1	P39880	1505 aa		32.13	■■■□□ 2.73
SLC41A3-222	ENST00000514891	EIF4G3	O43432	1585 aa	Known RBP	32.11	■■■□□ 2.73
SLC41A3-222	ENST00000514891	SOGA1	O94964	1423 aa		32.09	■■■□□ 2.73
SLC41A3-222	ENST00000514891	FGD5	Q6ZNL6	1462 aa		32.09	■■■□□ 2.73
SLC41A3-222	ENST00000514891	TDRD9	Q8NDG6	1382 aa	Known RBP	32.04	■■■□□ 2.72
SLC41A3-222	ENST00000514891	TRIM41	Q8WV44	630 aa		31.97	■■■□□ 2.71
SLC41A3-222	ENST00000514891	FBLN2	P98095	1184 aa		31.91	■■■□□ 2.7
SLC41A3-222	ENST00000514891	CHD1	O14646	1710 aa		31.82	■■■□□ 2.68
SLC41A3-222	ENST00000514891	SNAPC4	Q5SXM2	1469 aa		31.78	■■■□□ 2.68
SLC41A3-222	ENST00000514891	WRN	Q14191	1432 aa	Predicted RBP eCLIP	31.75	■■■□□ 2.67
SLC41A3-222	ENST00000514891	WDR97	A6NE52	1622 aa		31.75	■■■□□ 2.67
SLC41A3-222	ENST00000514891	SYNJ1	O43426	1573 aa		31.73	■■■□□ 2.67
SLC41A3-222	ENST00000514891	GRIN2B	Q13224	1484 aa		31.7	■■■□□ 2.66
SLC41A3-222	ENST00000514891	GAPVD1	Q14C86	1478 aa		31.68	■■■□□ 2.66
SLC41A3-222	ENST00000514891	ABCA10	Q8WWZ4	1543 aa		31.68	■■■□□ 2.66
SLC41A3-222	ENST00000514891	TOP2B	Q02880	1626 aa		31.67	■■■□□ 2.66
SLC41A3-222	ENST00000514891	CHMP7	Q8WUX9	453 aa	Predicted RBP	31.67	■■■□□ 2.66
SLC41A3-222	ENST00000514891	RIMBP3C	A6NJZ7	1639 aa		31.66	■■■□□ 2.66
SLC41A3-222	ENST00000514891	RIMBP3B	A6NNM3	1639 aa		31.66	■■■□□ 2.66
SLC41A3-222	ENST00000514891	RIMBP3	Q9UFD9	1639 aa		31.66	■■■□□ 2.66
SLC41A3-222	ENST00000514891	BIVM-ERCC5	R4GMW8	1640 aa		31.66	■■■□□ 2.66
SLC41A3-222	ENST00000514891	MAGI1	Q96QZ7	1491 aa	Predicted RBP	31.61	■■■□□ 2.65
SLC41A3-222	ENST00000514891	PBRM1	Q86U86	1689 aa		31.6	■■■□□ 2.65
SLC41A3-222	ENST00000514891	ARHGEF11	O15085	1522 aa		31.6	■■■□□ 2.65
SLC41A3-222	ENST00000514891	ABCA5	Q8WWZ7	1642 aa		31.58	■■■□□ 2.65
SLC41A3-222	ENST00000514891	SYNJ2	O15056	1496 aa		31.53	■■■□□ 2.64
SLC41A3-222	ENST00000514891	CYB5RL	Q6IPT4	315 aa		31.47	■■■□□ 2.63
SLC41A3-222	ENST00000514891	CLASP1	Q7Z460	1538 aa		31.42	■■■□□ 2.62
SLC41A3-222	ENST00000514891	ARAP1	Q96P48	1450 aa		31.34	■■■□□ 2.61
SLC41A3-222	ENST00000514891	ADAMTS12	P58397	1594 aa		31.33	■■■□□ 2.61
SLC41A3-222	ENST00000514891	GRIN2A	Q12879	1464 aa		31.31	■■■□□ 2.6
SLC41A3-222	ENST00000514891	FHAD1	B1AJZ9	1412 aa		31.27	■■■□□ 2.6
SLC41A3-222	ENST00000514891	ERICH3	Q5RHP9	1530 aa		31.26	■■■□□ 2.59
SLC41A3-222	ENST00000514891	CEP170	Q5SW79	1584 aa		31.2	■■■□□ 2.58
SLC41A3-222	ENST00000514891	NUP160	Q12769	1436 aa		31.16	■■■□□ 2.58
SLC41A3-222	ENST00000514891	KIF27	Q86VH2	1401 aa		31.1	■■■□□ 2.57
SLC41A3-222	ENST00000514891	ERCC6L2	Q5T890	1561 aa		31.09	■■■□□ 2.57
SLC41A3-222	ENST00000514891	IGF1R	P08069	1367 aa		31.09	■■■□□ 2.57
SLC41A3-222	ENST00000514891	TRH	P20396	242 aa	Predicted RBP	30.98	■■■□□ 2.55
SLC41A3-222	ENST00000514891	SHROOM2	Q13796	1616 aa		30.95	■■■□□ 2.54
SLC41A3-222	ENST00000514891	JPH4	Q96JJ6	628 aa		30.94	■■■□□ 2.54
SLC41A3-222	ENST00000514891	PRG4	Q92954	1404 aa	Predicted RBP	30.9	■■■□□ 2.54

Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms