RNA–Protein interactions for RNA: ENST00000514820.1

SNRPCP8-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 8, humanhuman

BASIC

Gene SNRPCP8, Length 211 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP8-201ENST00000514820 NISCHQ9Y2I1 1504 aa20.93■□□□□ 0.94
SNRPCP8-201ENST00000514820 CCDC180Q9P1Z9 1646 aa18.71■□□□□ 0.58
SNRPCP8-201ENST00000514820 ABCC9O60706 1549 aa18.48■□□□□ 0.55
SNRPCP8-201ENST00000514820 RB1CC1Q8TDY2 1594 aa17.69■□□□□ 0.42
SNRPCP8-201ENST00000514820 NACADO15069 1562 aa17.62■□□□□ 0.41
SNRPCP8-201ENST00000514820 DCAF8L2P0C7V8 631 aa17.49■□□□□ 0.39
SNRPCP8-201ENST00000514820 MYO15BQ96JP2 1530 aa17.47■□□□□ 0.39
SNRPCP8-201ENST00000514820 ZCCHC6Q5VYS8 1495 aaKnown RBP17.41■□□□□ 0.38
SNRPCP8-201ENST00000514820 DCAF1Q9Y4B6 1507 aa17.31■□□□□ 0.36
SNRPCP8-201ENST00000514820 UNC13AQ9UPW8 1703 aa17.29■□□□□ 0.36
SNRPCP8-201ENST00000514820 PABPN1Q86U42 306 aaKnown RBP eCLIP17.21■□□□□ 0.35
SNRPCP8-201ENST00000514820 BICRAQ9NZM4 1560 aa17.19■□□□□ 0.34
SNRPCP8-201ENST00000514820 DNAJC5BQ9UF47 199 aa17.15■□□□□ 0.34
SNRPCP8-201ENST00000514820 SCRIBQ14160 1630 aa17.05■□□□□ 0.32
SNRPCP8-201ENST00000514820 SHROOM4Q9ULL8 1493 aa16.99■□□□□ 0.31
SNRPCP8-201ENST00000514820 EIF4G1Q04637 1599 aaKnown RBP16.73■□□□□ 0.27
SNRPCP8-201ENST00000514820 CC2D2AQ9P2K1 1620 aa16.71■□□□□ 0.27
SNRPCP8-201ENST00000514820 CECR2Q9BXF3 1484 aa16.63■□□□□ 0.25
SNRPCP8-201ENST00000514820 SMARCA4P51532 1647 aa16.29■□□□□ 0.2
SNRPCP8-201ENST00000514820 NCAPD3P42695 1498 aa16.26■□□□□ 0.19
SNRPCP8-201ENST00000514820 ATAD2BQ9ULI0 1458 aa16.24■□□□□ 0.19
SNRPCP8-201ENST00000514820 BAZ1AQ9NRL2 1556 aaPredicted RBP16.23■□□□□ 0.19
SNRPCP8-201ENST00000514820 SMARCA2P51531 1590 aa16.21■□□□□ 0.19
SNRPCP8-201ENST00000514820 HMGXB3Q12766 1538 aa16.19■□□□□ 0.18
SNRPCP8-201ENST00000514820 PEG3Q9GZU2 1588 aa16.14■□□□□ 0.17
SNRPCP8-201ENST00000514820 MROH2BQ7Z745 1585 aa16.13■□□□□ 0.17
SNRPCP8-201ENST00000514820 BAZ1BQ9UIG0 1483 aaKnown RBP16.1■□□□□ 0.17
SNRPCP8-201ENST00000514820 NESP48681 1621 aa15.94■□□□□ 0.14
SNRPCP8-201ENST00000514820 ERCC6Q03468 1493 aa15.94■□□□□ 0.14
SNRPCP8-201ENST00000514820 WIZO95785 1651 aa15.93■□□□□ 0.14
SNRPCP8-201ENST00000514820 RSF1Q96T23 1441 aaPredicted RBP15.86■□□□□ 0.13
SNRPCP8-201ENST00000514820 LAMC3Q9Y6N6 1575 aa15.86■□□□□ 0.13
SNRPCP8-201ENST00000514820 CUX2O14529 1486 aa15.85■□□□□ 0.13
SNRPCP8-201ENST00000514820 THOC2Q8NI27 1593 aaKnown RBP15.77■□□□□ 0.11
SNRPCP8-201ENST00000514820 TOP2AP11388 1531 aaKnown RBP15.77■□□□□ 0.11
SNRPCP8-201ENST00000514820 CADPSQ9ULU8 1353 aa15.76■□□□□ 0.11
SNRPCP8-201ENST00000514820 PDS5BQ9NTI5 1447 aa15.75■□□□□ 0.11
SNRPCP8-201ENST00000514820 KIF21AQ7Z4S6 1674 aa15.74■□□□□ 0.11
SNRPCP8-201ENST00000514820 CFTRP13569 1480 aa15.65■□□□□ 0.1
SNRPCP8-201ENST00000514820 MRC2Q9UBG0 1479 aa15.62■□□□□ 0.09
SNRPCP8-201ENST00000514820 FANCD2Q9BXW9 1451 aa15.59■□□□□ 0.09
SNRPCP8-201ENST00000514820 CEP164Q9UPV0 1460 aa15.59■□□□□ 0.09
SNRPCP8-201ENST00000514820 WDR62O43379 1518 aa15.59■□□□□ 0.09
SNRPCP8-201ENST00000514820 DNAJC5Q9H3Z4 198 aa15.58■□□□□ 0.08
SNRPCP8-201ENST00000514820 CCDC88BA6NC98 1476 aa15.57■□□□□ 0.08
SNRPCP8-201ENST00000514820 PRDM2Q13029 1718 aa15.5■□□□□ 0.07
SNRPCP8-201ENST00000514820 URB2Q14146 1524 aaKnown RBP15.47■□□□□ 0.07
SNRPCP8-201ENST00000514820 TOPBP1Q92547 1522 aa15.33■□□□□ 0.05
SNRPCP8-201ENST00000514820 DNMBPQ6XZF7 1577 aa15.3■□□□□ 0.04
SNRPCP8-201ENST00000514820 ABCC8Q09428 1581 aa15.28■□□□□ 0.04
SNRPCP8-201ENST00000514820 IFT140Q96RY7 1462 aa15.27■□□□□ 0.04
SNRPCP8-201ENST00000514820 SUPT5HO00267 1087 aaKnown RBP15.26■□□□□ 0.03
SNRPCP8-201ENST00000514820 ZNF608Q9ULD9 1512 aaPredicted RBP15.24■□□□□ 0.03
SNRPCP8-201ENST00000514820 POLA1P09884 1462 aaPredicted RBP15.2■□□□□ 0.02
SNRPCP8-201ENST00000514820 TARBP1Q13395 1621 aaKnown RBP15.18■□□□□ 0.02
SNRPCP8-201ENST00000514820 EIF4G3O43432 1585 aaKnown RBP15.18■□□□□ 0.02
SNRPCP8-201ENST00000514820 CUX1P39880 1505 aa15.15■□□□□ 0.02
SNRPCP8-201ENST00000514820 FGD5Q6ZNL6 1462 aa15.12■□□□□ 0.01
SNRPCP8-201ENST00000514820 RAD54L2Q9Y4B4 1467 aa15.12■□□□□ 0.01
SNRPCP8-201ENST00000514820 OSCARQ8IYS5 282 aa15.11■□□□□ 0.01
SNRPCP8-201ENST00000514820 AQRO60306 1485 aaKnown RBP eCLIP15.11■□□□□ 0.01
SNRPCP8-201ENST00000514820 SOGA1O94964 1423 aa15.09■□□□□ 0.01
SNRPCP8-201ENST00000514820 WDR97A6NE52 1622 aa15.05■□□□□ -0
SNRPCP8-201ENST00000514820 TDRD9Q8NDG6 1382 aaKnown RBP15.04■□□□□ -0
SNRPCP8-201ENST00000514820 CHD1O14646 1710 aa15□□□□□ -0.01
SNRPCP8-201ENST00000514820 SNAPC4Q5SXM2 1469 aa14.98□□□□□ -0.01
SNRPCP8-201ENST00000514820 ABCA10Q8WWZ4 1543 aa14.97□□□□□ -0.01
SNRPCP8-201ENST00000514820 GRIN2BQ13224 1484 aa14.96□□□□□ -0.01
SNRPCP8-201ENST00000514820 WRNQ14191 1432 aaPredicted RBP eCLIP14.96□□□□□ -0.01
SNRPCP8-201ENST00000514820 TRIM41Q8WV44 630 aa14.96□□□□□ -0.01
SNRPCP8-201ENST00000514820 TOP2BQ02880 1626 aa14.95□□□□□ -0.02
SNRPCP8-201ENST00000514820 BIVM-ERCC5R4GMW8 1640 aa14.95□□□□□ -0.02
SNRPCP8-201ENST00000514820 MAGI1Q96QZ7 1491 aaPredicted RBP14.95□□□□□ -0.02
SNRPCP8-201ENST00000514820 SYNJ1O43426 1573 aa14.95□□□□□ -0.02
SNRPCP8-201ENST00000514820 RIMBP3CA6NJZ7 1639 aa14.94□□□□□ -0.02
SNRPCP8-201ENST00000514820 RIMBP3BA6NNM3 1639 aa14.94□□□□□ -0.02
SNRPCP8-201ENST00000514820 ABCA5Q8WWZ7 1642 aa14.94□□□□□ -0.02
SNRPCP8-201ENST00000514820 RIMBP3Q9UFD9 1639 aa14.94□□□□□ -0.02
SNRPCP8-201ENST00000514820 FBLN2P98095 1184 aa14.93□□□□□ -0.02
SNRPCP8-201ENST00000514820 GAPVD1Q14C86 1478 aa14.93□□□□□ -0.02
SNRPCP8-201ENST00000514820 ARHGEF11O15085 1522 aa14.92□□□□□ -0.02
SNRPCP8-201ENST00000514820 PBRM1Q86U86 1689 aa14.92□□□□□ -0.02
SNRPCP8-201ENST00000514820 SYNJ2O15056 1496 aa14.89□□□□□ -0.03
SNRPCP8-201ENST00000514820 CHMP7Q8WUX9 453 aaPredicted RBP14.86□□□□□ -0.03
SNRPCP8-201ENST00000514820 CLASP1Q7Z460 1538 aa14.86□□□□□ -0.03
SNRPCP8-201ENST00000514820 ADAMTS12P58397 1594 aa14.81□□□□□ -0.04
SNRPCP8-201ENST00000514820 ARAP1Q96P48 1450 aa14.8□□□□□ -0.04
SNRPCP8-201ENST00000514820 GRIN2AQ12879 1464 aa14.78□□□□□ -0.04
SNRPCP8-201ENST00000514820 ERICH3Q5RHP9 1530 aa14.77□□□□□ -0.04
SNRPCP8-201ENST00000514820 FHAD1B1AJZ9 1412 aa14.75□□□□□ -0.05
SNRPCP8-201ENST00000514820 CYB5RLQ6IPT4 315 aa14.75□□□□□ -0.05
SNRPCP8-201ENST00000514820 NUP160Q12769 1436 aa14.73□□□□□ -0.05
SNRPCP8-201ENST00000514820 CEP170Q5SW79 1584 aa14.73□□□□□ -0.05
SNRPCP8-201ENST00000514820 KIF27Q86VH2 1401 aa14.65□□□□□ -0.06
SNRPCP8-201ENST00000514820 ERCC6L2Q5T890 1561 aa14.64□□□□□ -0.07
SNRPCP8-201ENST00000514820 SHROOM2Q13796 1616 aa14.64□□□□□ -0.07
SNRPCP8-201ENST00000514820 IGF1RP08069 1367 aa14.61□□□□□ -0.07
SNRPCP8-201ENST00000514820 CUL7Q14999 1698 aa14.6□□□□□ -0.07
SNRPCP8-201ENST00000514820 RUSC2Q8N2Y8 1516 aa14.6□□□□□ -0.07
SNRPCP8-201ENST00000514820 PRG4Q92954 1404 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms