RNA–Protein interactions for RNA: ENST00000514636.1

LEMD2-213, Transcript of LEM domain containing 2, humanhuman

TSL 3

Gene LEMD2, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-213ENST00000514636 NISCHQ9Y2I1 1504 aa38.03■■■■□ 3.68
LEMD2-213ENST00000514636 ABCC9O60706 1549 aa34.92■■■■□ 3.18
LEMD2-213ENST00000514636 CCDC180Q9P1Z9 1646 aa34.45■■■■□ 3.11
LEMD2-213ENST00000514636 DNAJC5BQ9UF47 199 aa33.45■■■□□ 2.95
LEMD2-213ENST00000514636 RB1CC1Q8TDY2 1594 aa33.05■■■□□ 2.88
LEMD2-213ENST00000514636 NACADO15069 1562 aa32.72■■■□□ 2.83
LEMD2-213ENST00000514636 PABPN1Q86U42 306 aaKnown RBP eCLIP32.34■■■□□ 2.77
LEMD2-213ENST00000514636 UNC13AQ9UPW8 1703 aa32.28■■■□□ 2.76
LEMD2-213ENST00000514636 MYO15BQ96JP2 1530 aa32.21■■■□□ 2.75
LEMD2-213ENST00000514636 BICRAQ9NZM4 1560 aa32.19■■■□□ 2.74
LEMD2-213ENST00000514636 DCAF8L2P0C7V8 631 aa32■■■□□ 2.71
LEMD2-213ENST00000514636 SHROOM4Q9ULL8 1493 aa31.82■■■□□ 2.68
LEMD2-213ENST00000514636 CECR2Q9BXF3 1484 aa31.6■■■□□ 2.65
LEMD2-213ENST00000514636 CC2D2AQ9P2K1 1620 aa31.59■■■□□ 2.65
LEMD2-213ENST00000514636 DCAF1Q9Y4B6 1507 aa31.5■■■□□ 2.63
LEMD2-213ENST00000514636 ZCCHC6Q5VYS8 1495 aaKnown RBP31.41■■■□□ 2.62
LEMD2-213ENST00000514636 EIF4G1Q04637 1599 aaKnown RBP31.4■■■□□ 2.62
LEMD2-213ENST00000514636 DNAJC5Q9H3Z4 198 aa31.24■■■□□ 2.59
LEMD2-213ENST00000514636 SCRIBQ14160 1630 aa31.17■■■□□ 2.58
LEMD2-213ENST00000514636 CUX2O14529 1486 aa30.53■■■□□ 2.48
LEMD2-213ENST00000514636 NCAPD3P42695 1498 aa30.26■■■□□ 2.44
LEMD2-213ENST00000514636 ERCC6Q03468 1493 aa30.17■■■□□ 2.42
LEMD2-213ENST00000514636 ATAD2BQ9ULI0 1458 aa30.01■■■□□ 2.4
LEMD2-213ENST00000514636 HMGXB3Q12766 1538 aa29.96■■■□□ 2.39
LEMD2-213ENST00000514636 SMARCA2P51531 1590 aa29.88■■■□□ 2.37
LEMD2-213ENST00000514636 NESP48681 1621 aa29.85■■■□□ 2.37
LEMD2-213ENST00000514636 SMARCA4P51532 1647 aa29.78■■■□□ 2.36
LEMD2-213ENST00000514636 THOC2Q8NI27 1593 aaKnown RBP29.78■■■□□ 2.36
LEMD2-213ENST00000514636 PEG3Q9GZU2 1588 aa29.64■■■□□ 2.33
LEMD2-213ENST00000514636 LAMC3Q9Y6N6 1575 aa29.63■■■□□ 2.33
LEMD2-213ENST00000514636 BAZ1BQ9UIG0 1483 aaKnown RBP29.61■■■□□ 2.33
LEMD2-213ENST00000514636 BAZ1AQ9NRL2 1556 aaPredicted RBP29.55■■■□□ 2.32
LEMD2-213ENST00000514636 PDS5BQ9NTI5 1447 aa29.44■■■□□ 2.3
LEMD2-213ENST00000514636 KIF21AQ7Z4S6 1674 aa29.44■■■□□ 2.3
LEMD2-213ENST00000514636 TRIM41Q8WV44 630 aa29.32■■■□□ 2.28
LEMD2-213ENST00000514636 MROH2BQ7Z745 1585 aa29.25■■■□□ 2.27
LEMD2-213ENST00000514636 WDR62O43379 1518 aa29.24■■■□□ 2.27
LEMD2-213ENST00000514636 CADPSQ9ULU8 1353 aa29.23■■■□□ 2.27
LEMD2-213ENST00000514636 MRC2Q9UBG0 1479 aa29.23■■■□□ 2.27
LEMD2-213ENST00000514636 CEP164Q9UPV0 1460 aa28.94■■■□□ 2.22
LEMD2-213ENST00000514636 OSCARQ8IYS5 282 aa28.9■■■□□ 2.22
LEMD2-213ENST00000514636 FANCD2Q9BXW9 1451 aa28.86■■■□□ 2.21
LEMD2-213ENST00000514636 CFTRP13569 1480 aa28.81■■■□□ 2.2
LEMD2-213ENST00000514636 WIZO95785 1651 aa28.8■■■□□ 2.2
LEMD2-213ENST00000514636 URB2Q14146 1524 aaKnown RBP28.7■■■□□ 2.19
LEMD2-213ENST00000514636 RIMBP3CA6NJZ7 1639 aa28.63■■■□□ 2.17
LEMD2-213ENST00000514636 RIMBP3BA6NNM3 1639 aa28.63■■■□□ 2.17
LEMD2-213ENST00000514636 RIMBP3Q9UFD9 1639 aa28.63■■■□□ 2.17
LEMD2-213ENST00000514636 ARHGEF11O15085 1522 aa28.5■■■□□ 2.15
LEMD2-213ENST00000514636 TOP2AP11388 1531 aaKnown RBP28.48■■■□□ 2.15
LEMD2-213ENST00000514636 IFT140Q96RY7 1462 aa28.44■■■□□ 2.14
LEMD2-213ENST00000514636 RSF1Q96T23 1441 aaPredicted RBP28.43■■■□□ 2.14
LEMD2-213ENST00000514636 ZNF608Q9ULD9 1512 aaPredicted RBP28.42■■■□□ 2.14
LEMD2-213ENST00000514636 PRDM2Q13029 1718 aa28.38■■■□□ 2.13
LEMD2-213ENST00000514636 TOPBP1Q92547 1522 aa28.26■■■□□ 2.11
LEMD2-213ENST00000514636 EIF4G3O43432 1585 aaKnown RBP28.24■■■□□ 2.11
LEMD2-213ENST00000514636 ARAP1Q96P48 1450 aa28.19■■■□□ 2.1
LEMD2-213ENST00000514636 ABCC8Q09428 1581 aa28.19■■■□□ 2.1
LEMD2-213ENST00000514636 CYB5RLQ6IPT4 315 aa28.18■■■□□ 2.1
LEMD2-213ENST00000514636 CCDC88BA6NC98 1476 aa28.13■■■□□ 2.09
LEMD2-213ENST00000514636 TARBP1Q13395 1621 aaKnown RBP28.11■■■□□ 2.09
LEMD2-213ENST00000514636 DNMBPQ6XZF7 1577 aa28.11■■■□□ 2.09
LEMD2-213ENST00000514636 CHD1O14646 1710 aa28.09■■■□□ 2.09
LEMD2-213ENST00000514636 AQRO60306 1485 aaKnown RBP eCLIP28.03■■■□□ 2.082e-6■■■■□ 21.2
LEMD2-213ENST00000514636 TRHP20396 242 aaPredicted RBP27.99■■■□□ 2.07
LEMD2-213ENST00000514636 POLA1P09884 1462 aaPredicted RBP27.94■■■□□ 2.06
LEMD2-213ENST00000514636 CLASP1Q7Z460 1538 aa27.9■■■□□ 2.06
LEMD2-213ENST00000514636 WDR97A6NE52 1622 aa27.84■■■□□ 2.05
LEMD2-213ENST00000514636 FBLN2P98095 1184 aa27.81■■■□□ 2.04
LEMD2-213ENST00000514636 RAD54L2Q9Y4B4 1467 aa27.77■■■□□ 2.04
LEMD2-213ENST00000514636 TDRD9Q8NDG6 1382 aaKnown RBP27.74■■■□□ 2.03
LEMD2-213ENST00000514636 SNAPC4Q5SXM2 1469 aa27.74■■■□□ 2.03
LEMD2-213ENST00000514636 SOGA1O94964 1423 aa27.74■■■□□ 2.03
LEMD2-213ENST00000514636 MAGI1Q96QZ7 1491 aaPredicted RBP27.73■■■□□ 2.03
LEMD2-213ENST00000514636 SYNJ1O43426 1573 aa27.72■■■□□ 2.03
LEMD2-213ENST00000514636 AEBP2Q6ZN18 517 aaPredicted RBP27.65■■■□□ 2.02
LEMD2-213ENST00000514636 SYNJ2O15056 1496 aa27.63■■■□□ 2.01
LEMD2-213ENST00000514636 GRIN2BQ13224 1484 aa27.62■■■□□ 2.01
LEMD2-213ENST00000514636 FGD5Q6ZNL6 1462 aa27.62■■■□□ 2.01
LEMD2-213ENST00000514636 CHMP7Q8WUX9 453 aaPredicted RBP27.6■■■□□ 2.01
LEMD2-213ENST00000514636 GAPVD1Q14C86 1478 aa27.56■■■□□ 2
LEMD2-213ENST00000514636 CUX1P39880 1505 aa27.52■■■□□ 2
LEMD2-213ENST00000514636 PBRM1Q86U86 1689 aa27.4■■□□□ 1.98
LEMD2-213ENST00000514636 ABCA5Q8WWZ7 1642 aa27.37■■□□□ 1.97
LEMD2-213ENST00000514636 ABCA10Q8WWZ4 1543 aa27.36■■□□□ 1.97
LEMD2-213ENST00000514636 ERCC6L2Q5T890 1561 aa27.31■■□□□ 1.96
LEMD2-213ENST00000514636 GRIN2AQ12879 1464 aa27.27■■□□□ 1.96
LEMD2-213ENST00000514636 NUP160Q12769 1436 aa27.27■■□□□ 1.96
LEMD2-213ENST00000514636 CEP170Q5SW79 1584 aa27.24■■□□□ 1.95
LEMD2-213ENST00000514636 SHROOM2Q13796 1616 aa27.23■■□□□ 1.95
LEMD2-213ENST00000514636 ADAMTS12P58397 1594 aa27.18■■□□□ 1.94
LEMD2-213ENST00000514636 KIF13AQ9H1H9 1805 aa27.16■■□□□ 1.94
LEMD2-213ENST00000514636 FHAD1B1AJZ9 1412 aa27.07■■□□□ 1.92
LEMD2-213ENST00000514636 WRNQ14191 1432 aaPredicted RBP eCLIP27.05■■□□□ 1.92
LEMD2-213ENST00000514636 ERICH3Q5RHP9 1530 aa26.99■■□□□ 1.91
LEMD2-213ENST00000514636 ABCC10Q5T3U5 1492 aa26.98■■□□□ 1.91
LEMD2-213ENST00000514636 MAPKBP1O60336 1514 aa26.95■■□□□ 1.9
LEMD2-213ENST00000514636 PRG4Q92954 1404 aaPredicted RBP26.94■■□□□ 1.9
LEMD2-213ENST00000514636 BIVM-ERCC5R4GMW8 1640 aa26.93■■□□□ 1.9
LEMD2-213ENST00000514636 TOP2BQ02880 1626 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms