RNA–Protein interactions for RNA: ENST00000514582.1

KIT-204, Transcript of KIT proto-oncogene receptor tyrosine kinase, humanhuman

TSL 2

Gene KIT, Length 538 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIT-204ENST00000514582 NISCHQ9Y2I1 1504 aa34.2■■■■□ 3.06
KIT-204ENST00000514582 CCDC180Q9P1Z9 1646 aa30.53■■■□□ 2.48
KIT-204ENST00000514582 ABCC9O60706 1549 aa30.42■■■□□ 2.46
KIT-204ENST00000514582 RB1CC1Q8TDY2 1594 aa29.01■■■□□ 2.23
KIT-204ENST00000514582 DCAF8L2P0C7V8 631 aa28.94■■■□□ 2.22
KIT-204ENST00000514582 NACADO15069 1562 aa28.85■■■□□ 2.21
KIT-204ENST00000514582 MYO15BQ96JP2 1530 aa28.49■■■□□ 2.15
KIT-204ENST00000514582 PABPN1Q86U42 306 aaKnown RBP eCLIP28.4■■■□□ 2.14
KIT-204ENST00000514582 ZCCHC6Q5VYS8 1495 aaKnown RBP28.37■■■□□ 2.13
KIT-204ENST00000514582 DNAJC5BQ9UF47 199 aa28.31■■■□□ 2.12
KIT-204ENST00000514582 UNC13AQ9UPW8 1703 aa28.27■■■□□ 2.12
KIT-204ENST00000514582 DCAF1Q9Y4B6 1507 aa28.22■■■□□ 2.11
KIT-204ENST00000514582 BICRAQ9NZM4 1560 aa28.11■■■□□ 2.09
KIT-204ENST00000514582 SCRIBQ14160 1630 aa27.91■■■□□ 2.06
KIT-204ENST00000514582 SHROOM4Q9ULL8 1493 aa27.75■■■□□ 2.03
KIT-204ENST00000514582 CC2D2AQ9P2K1 1620 aa27.44■■□□□ 1.98
KIT-204ENST00000514582 EIF4G1Q04637 1599 aaKnown RBP27.43■■□□□ 1.98
KIT-204ENST00000514582 CECR2Q9BXF3 1484 aa27.36■■□□□ 1.97
KIT-204ENST00000514582 NCAPD3P42695 1498 aa26.64■■□□□ 1.86
KIT-204ENST00000514582 SMARCA4P51532 1647 aa26.61■■□□□ 1.85
KIT-204ENST00000514582 ATAD2BQ9ULI0 1458 aa26.61■■□□□ 1.85
KIT-204ENST00000514582 SMARCA2P51531 1590 aa26.54■■□□□ 1.84
KIT-204ENST00000514582 BAZ1AQ9NRL2 1556 aaPredicted RBP26.53■■□□□ 1.84
KIT-204ENST00000514582 HMGXB3Q12766 1538 aa26.44■■□□□ 1.82
KIT-204ENST00000514582 BAZ1BQ9UIG0 1483 aaKnown RBP26.38■■□□□ 1.81
KIT-204ENST00000514582 MROH2BQ7Z745 1585 aa26.36■■□□□ 1.81
KIT-204ENST00000514582 PEG3Q9GZU2 1588 aa26.32■■□□□ 1.8
KIT-204ENST00000514582 ERCC6Q03468 1493 aa26.27■■□□□ 1.8
KIT-204ENST00000514582 NESP48681 1621 aa26.17■■□□□ 1.78
KIT-204ENST00000514582 CUX2O14529 1486 aa26.08■■□□□ 1.77
KIT-204ENST00000514582 WIZO95785 1651 aa26.05■■□□□ 1.76
KIT-204ENST00000514582 LAMC3Q9Y6N6 1575 aa25.99■■□□□ 1.75
KIT-204ENST00000514582 RSF1Q96T23 1441 aaPredicted RBP25.91■■□□□ 1.74
KIT-204ENST00000514582 PDS5BQ9NTI5 1447 aa25.89■■□□□ 1.74
KIT-204ENST00000514582 CADPSQ9ULU8 1353 aa25.87■■□□□ 1.73
KIT-204ENST00000514582 DNAJC5Q9H3Z4 198 aa25.84■■□□□ 1.73
KIT-204ENST00000514582 THOC2Q8NI27 1593 aaKnown RBP25.81■■□□□ 1.72
KIT-204ENST00000514582 KIF21AQ7Z4S6 1674 aa25.8■■□□□ 1.72
KIT-204ENST00000514582 TOP2AP11388 1531 aaKnown RBP25.73■■□□□ 1.71
KIT-204ENST00000514582 MRC2Q9UBG0 1479 aa25.63■■□□□ 1.69
KIT-204ENST00000514582 CFTRP13569 1480 aa25.6■■□□□ 1.69
KIT-204ENST00000514582 CEP164Q9UPV0 1460 aa25.59■■□□□ 1.69
KIT-204ENST00000514582 FANCD2Q9BXW9 1451 aa25.58■■□□□ 1.69
KIT-204ENST00000514582 WDR62O43379 1518 aa25.53■■□□□ 1.68
KIT-204ENST00000514582 CCDC88BA6NC98 1476 aa25.47■■□□□ 1.67
KIT-204ENST00000514582 URB2Q14146 1524 aaKnown RBP25.33■■□□□ 1.65
KIT-204ENST00000514582 PRDM2Q13029 1718 aa25.29■■□□□ 1.64
KIT-204ENST00000514582 TOPBP1Q92547 1522 aa25.11■■□□□ 1.61
KIT-204ENST00000514582 ABCC8Q09428 1581 aa25.08■■□□□ 1.61
KIT-204ENST00000514582 SUPT5HO00267 1087 aaKnown RBP25.06■■□□□ 1.6
KIT-204ENST00000514582 IFT140Q96RY7 1462 aa25.06■■□□□ 1.6
KIT-204ENST00000514582 DNMBPQ6XZF7 1577 aa25.02■■□□□ 1.6
KIT-204ENST00000514582 OSCARQ8IYS5 282 aa25■■□□□ 1.59
KIT-204ENST00000514582 ZNF608Q9ULD9 1512 aaPredicted RBP25■■□□□ 1.59
KIT-204ENST00000514582 TRIM41Q8WV44 630 aa24.89■■□□□ 1.58
KIT-204ENST00000514582 POLA1P09884 1462 aaPredicted RBP24.86■■□□□ 1.57
KIT-204ENST00000514582 EIF4G3O43432 1585 aaKnown RBP24.84■■□□□ 1.57
KIT-204ENST00000514582 AQRO60306 1485 aaKnown RBP eCLIP24.83■■□□□ 1.56
KIT-204ENST00000514582 TARBP1Q13395 1621 aaKnown RBP24.83■■□□□ 1.56
KIT-204ENST00000514582 SOGA1O94964 1423 aa24.8■■□□□ 1.56
KIT-204ENST00000514582 RAD54L2Q9Y4B4 1467 aa24.79■■□□□ 1.56
KIT-204ENST00000514582 FGD5Q6ZNL6 1462 aa24.76■■□□□ 1.55
KIT-204ENST00000514582 CUX1P39880 1505 aa24.75■■□□□ 1.55
KIT-204ENST00000514582 TDRD9Q8NDG6 1382 aaKnown RBP24.73■■□□□ 1.55
KIT-204ENST00000514582 FBLN2P98095 1184 aa24.71■■□□□ 1.55
KIT-204ENST00000514582 CHD1O14646 1710 aa24.6■■□□□ 1.53
KIT-204ENST00000514582 WDR97A6NE52 1622 aa24.58■■□□□ 1.53
KIT-204ENST00000514582 SNAPC4Q5SXM2 1469 aa24.57■■□□□ 1.52
KIT-204ENST00000514582 RIMBP3CA6NJZ7 1639 aa24.57■■□□□ 1.52
KIT-204ENST00000514582 RIMBP3BA6NNM3 1639 aa24.57■■□□□ 1.52
KIT-204ENST00000514582 RIMBP3Q9UFD9 1639 aa24.57■■□□□ 1.52
KIT-204ENST00000514582 GRIN2BQ13224 1484 aa24.53■■□□□ 1.52
KIT-204ENST00000514582 ARHGEF11O15085 1522 aa24.53■■□□□ 1.52
KIT-204ENST00000514582 CHMP7Q8WUX9 453 aaPredicted RBP24.53■■□□□ 1.52
KIT-204ENST00000514582 GAPVD1Q14C86 1478 aa24.49■■□□□ 1.51
KIT-204ENST00000514582 MAGI1Q96QZ7 1491 aaPredicted RBP24.49■■□□□ 1.51
KIT-204ENST00000514582 ABCA10Q8WWZ4 1543 aa24.46■■□□□ 1.51
KIT-204ENST00000514582 WRNQ14191 1432 aaPredicted RBP eCLIP24.46■■□□□ 1.51
KIT-204ENST00000514582 CYB5RLQ6IPT4 315 aa24.43■■□□□ 1.5
KIT-204ENST00000514582 SYNJ2O15056 1496 aa24.42■■□□□ 1.5
KIT-204ENST00000514582 PBRM1Q86U86 1689 aa24.4■■□□□ 1.5
KIT-204ENST00000514582 TOP2BQ02880 1626 aa24.4■■□□□ 1.5
KIT-204ENST00000514582 BIVM-ERCC5R4GMW8 1640 aa24.39■■□□□ 1.49
KIT-204ENST00000514582 SYNJ1O43426 1573 aa24.38■■□□□ 1.49
KIT-204ENST00000514582 ABCA5Q8WWZ7 1642 aa24.38■■□□□ 1.49
KIT-204ENST00000514582 CLASP1Q7Z460 1538 aa24.32■■□□□ 1.48
KIT-204ENST00000514582 ARAP1Q96P48 1450 aa24.3■■□□□ 1.48
KIT-204ENST00000514582 AEBP2Q6ZN18 517 aaPredicted RBP24.25■■□□□ 1.47
KIT-204ENST00000514582 GRIN2AQ12879 1464 aa24.2■■□□□ 1.47
KIT-204ENST00000514582 ADAMTS12P58397 1594 aa24.19■■□□□ 1.46
KIT-204ENST00000514582 FHAD1B1AJZ9 1412 aa24.18■■□□□ 1.46
KIT-204ENST00000514582 ERICH3Q5RHP9 1530 aa24.16■■□□□ 1.46
KIT-204ENST00000514582 TRHP20396 242 aaPredicted RBP24.12■■□□□ 1.45
KIT-204ENST00000514582 NUP160Q12769 1436 aa24.1■■□□□ 1.45
KIT-204ENST00000514582 CEP170Q5SW79 1584 aa24.08■■□□□ 1.45
KIT-204ENST00000514582 KIF27Q86VH2 1401 aa24■■□□□ 1.43
KIT-204ENST00000514582 ERCC6L2Q5T890 1561 aa23.99■■□□□ 1.43
KIT-204ENST00000514582 IGF1RP08069 1367 aa23.94■■□□□ 1.42
KIT-204ENST00000514582 SHROOM2Q13796 1616 aa23.92■■□□□ 1.42
KIT-204ENST00000514582 JPH4Q96JJ6 628 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms