RNA–Protein interactions for RNA: ENST00000514485.5

PACRGL-231, Transcript of parkin coregulated like, humanhuman

TSL 3

Gene PACRGL, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-231ENST00000514485 NISCHQ9Y2I1 1504 aa52.49■■■■■ 5.99
PACRGL-231ENST00000514485 CCDC180Q9P1Z9 1646 aa47.11■■■■■ 5.13
PACRGL-231ENST00000514485 ABCC9O60706 1549 aa46.77■■■■■ 5.08
PACRGL-231ENST00000514485 RB1CC1Q8TDY2 1594 aa44.64■■■■■ 4.74
PACRGL-231ENST00000514485 NACADO15069 1562 aa44.37■■■■■ 4.69
PACRGL-231ENST00000514485 DCAF8L2P0C7V8 631 aa44.07■■■■■ 4.65
PACRGL-231ENST00000514485 UNC13AQ9UPW8 1703 aa43.88■■■■■ 4.62
PACRGL-231ENST00000514485 MYO15BQ96JP2 1530 aa43.81■■■■■ 4.6
PACRGL-231ENST00000514485 DNAJC5BQ9UF47 199 aa43.63■■■■■ 4.57
PACRGL-231ENST00000514485 ZCCHC6Q5VYS8 1495 aaKnown RBP43.57■■■■■ 4.56
PACRGL-231ENST00000514485 PABPN1Q86U42 306 aaKnown RBP eCLIP43.52■■■■■ 4.56
PACRGL-231ENST00000514485 BICRAQ9NZM4 1560 aa43.41■■■■■ 4.54
PACRGL-231ENST00000514485 DCAF1Q9Y4B6 1507 aa43.36■■■■■ 4.53
PACRGL-231ENST00000514485 SCRIBQ14160 1630 aa42.92■■■■■ 4.46
PACRGL-231ENST00000514485 SHROOM4Q9ULL8 1493 aa42.72■■■■■ 4.43
PACRGL-231ENST00000514485 CC2D2AQ9P2K1 1620 aa42.33■■■■■ 4.37
PACRGL-231ENST00000514485 EIF4G1Q04637 1599 aaKnown RBP42.27■■■■■ 4.36
PACRGL-231ENST00000514485 CECR2Q9BXF3 1484 aa42.08■■■■■ 4.33
PACRGL-231ENST00000514485 SMARCA4P51532 1647 aa40.96■■■■■ 4.15
PACRGL-231ENST00000514485 NCAPD3P42695 1498 aa40.91■■■■■ 4.14
PACRGL-231ENST00000514485 ATAD2BQ9ULI0 1458 aa40.85■■■■■ 4.13
PACRGL-231ENST00000514485 SMARCA2P51531 1590 aa40.77■■■■■ 4.12
PACRGL-231ENST00000514485 BAZ1AQ9NRL2 1556 aaPredicted RBP40.73■■■■■ 4.11
PACRGL-231ENST00000514485 HMGXB3Q12766 1538 aa40.71■■■■■ 4.11
PACRGL-231ENST00000514485 PEG3Q9GZU2 1588 aa40.53■■■■■ 4.08
PACRGL-231ENST00000514485 BAZ1BQ9UIG0 1483 aaKnown RBP40.47■■■■■ 4.07
PACRGL-231ENST00000514485 MROH2BQ7Z745 1585 aa40.47■■■■■ 4.07
PACRGL-231ENST00000514485 ERCC6Q03468 1493 aa40.32■■■■■ 4.05
PACRGL-231ENST00000514485 NESP48681 1621 aa40.28■■■■■ 4.04
PACRGL-231ENST00000514485 CUX2O14529 1486 aa40.18■■■■■ 4.02
PACRGL-231ENST00000514485 WIZO95785 1651 aa40.08■■■■■ 4.01
PACRGL-231ENST00000514485 LAMC3Q9Y6N6 1575 aa40.03■■■■■ 4
PACRGL-231ENST00000514485 KIF21AQ7Z4S6 1674 aa39.91■■■■□ 3.98
PACRGL-231ENST00000514485 THOC2Q8NI27 1593 aaKnown RBP39.89■■■■□ 3.98
PACRGL-231ENST00000514485 DNAJC5Q9H3Z4 198 aa39.82■■■■□ 3.97
PACRGL-231ENST00000514485 PDS5BQ9NTI5 1447 aa39.68■■■■□ 3.94
PACRGL-231ENST00000514485 RSF1Q96T23 1441 aaPredicted RBP39.65■■■■□ 3.94
PACRGL-231ENST00000514485 CADPSQ9ULU8 1353 aa39.65■■■■□ 3.94
PACRGL-231ENST00000514485 TOP2AP11388 1531 aaKnown RBP39.51■■■■□ 3.92
PACRGL-231ENST00000514485 MRC2Q9UBG0 1479 aa39.39■■■■□ 3.9
PACRGL-231ENST00000514485 WDR62O43379 1518 aa39.34■■■■□ 3.89
PACRGL-231ENST00000514485 CFTRP13569 1480 aa39.3■■■■□ 3.88
PACRGL-231ENST00000514485 CEP164Q9UPV0 1460 aa39.29■■■■□ 3.88
PACRGL-231ENST00000514485 FANCD2Q9BXW9 1451 aa39.26■■■■□ 3.88
PACRGL-231ENST00000514485 PRDM2Q13029 1718 aa39.18■■■■□ 3.86
PACRGL-231ENST00000514485 CCDC88BA6NC98 1476 aa39.03■■■■□ 3.84
PACRGL-231ENST00000514485 URB2Q14146 1524 aaKnown RBP38.97■■■■□ 3.83
PACRGL-231ENST00000514485 TOPBP1Q92547 1522 aa38.57■■■■□ 3.76
PACRGL-231ENST00000514485 DNMBPQ6XZF7 1577 aa38.48■■■■□ 3.75
PACRGL-231ENST00000514485 IFT140Q96RY7 1462 aa38.47■■■■□ 3.75
PACRGL-231ENST00000514485 ZNF608Q9ULD9 1512 aaPredicted RBP38.44■■■■□ 3.74
PACRGL-231ENST00000514485 ABCC8Q09428 1581 aa38.43■■■■□ 3.74
PACRGL-231ENST00000514485 SUPT5HO00267 1087 aaKnown RBP38.39■■■■□ 3.74
PACRGL-231ENST00000514485 EIF4G3O43432 1585 aaKnown RBP38.31■■■■□ 3.72
PACRGL-231ENST00000514485 OSCARQ8IYS5 282 aa38.29■■■■□ 3.72
PACRGL-231ENST00000514485 TARBP1Q13395 1621 aaKnown RBP38.28■■■■□ 3.72
PACRGL-231ENST00000514485 TRIM41Q8WV44 630 aa38.2■■■■□ 3.71
PACRGL-231ENST00000514485 POLA1P09884 1462 aaPredicted RBP38.19■■■■□ 3.7
PACRGL-231ENST00000514485 AQRO60306 1485 aaKnown RBP eCLIP38.08■■■■□ 3.69
PACRGL-231ENST00000514485 CHD1O14646 1710 aa38.07■■■■□ 3.68
PACRGL-231ENST00000514485 RAD54L2Q9Y4B4 1467 aa38.04■■■■□ 3.68
PACRGL-231ENST00000514485 CUX1P39880 1505 aa38.02■■■■□ 3.68
PACRGL-231ENST00000514485 FGD5Q6ZNL6 1462 aa37.99■■■■□ 3.67
PACRGL-231ENST00000514485 RIMBP3CA6NJZ7 1639 aa37.98■■■■□ 3.67
PACRGL-231ENST00000514485 RIMBP3BA6NNM3 1639 aa37.98■■■■□ 3.67
PACRGL-231ENST00000514485 RIMBP3Q9UFD9 1639 aa37.98■■■■□ 3.67
PACRGL-231ENST00000514485 SOGA1O94964 1423 aa37.95■■■■□ 3.67
PACRGL-231ENST00000514485 WDR97A6NE52 1622 aa37.86■■■■□ 3.65
PACRGL-231ENST00000514485 TDRD9Q8NDG6 1382 aaKnown RBP37.85■■■■□ 3.65
PACRGL-231ENST00000514485 ARHGEF11O15085 1522 aa37.82■■■■□ 3.64
PACRGL-231ENST00000514485 SNAPC4Q5SXM2 1469 aa37.73■■■■□ 3.63
PACRGL-231ENST00000514485 FBLN2P98095 1184 aa37.7■■■■□ 3.63
PACRGL-231ENST00000514485 PBRM1Q86U86 1689 aa37.69■■■■□ 3.62
PACRGL-231ENST00000514485 GRIN2BQ13224 1484 aa37.62■■■■□ 3.61
PACRGL-231ENST00000514485 MAGI1Q96QZ7 1491 aaPredicted RBP37.61■■■■□ 3.61
PACRGL-231ENST00000514485 ABCA5Q8WWZ7 1642 aa37.57■■■■□ 3.6
PACRGL-231ENST00000514485 ABCA10Q8WWZ4 1543 aa37.55■■■■□ 3.6
PACRGL-231ENST00000514485 BIVM-ERCC5R4GMW8 1640 aa37.54■■■■□ 3.6
PACRGL-231ENST00000514485 GAPVD1Q14C86 1478 aa37.53■■■■□ 3.6
PACRGL-231ENST00000514485 CLASP1Q7Z460 1538 aa37.52■■■■□ 3.6
PACRGL-231ENST00000514485 TOP2BQ02880 1626 aa37.49■■■■□ 3.59
PACRGL-231ENST00000514485 SYNJ1O43426 1573 aa37.48■■■■□ 3.59
PACRGL-231ENST00000514485 SYNJ2O15056 1496 aa37.48■■■■□ 3.59
PACRGL-231ENST00000514485 ARAP1Q96P48 1450 aa37.46■■■■□ 3.59
PACRGL-231ENST00000514485 CHMP7Q8WUX9 453 aaPredicted RBP37.45■■■■□ 3.59
PACRGL-231ENST00000514485 CYB5RLQ6IPT4 315 aa37.41■■■■□ 3.58
PACRGL-231ENST00000514485 WRNQ14191 1432 aaPredicted RBP eCLIP37.4■■■■□ 3.58
PACRGL-231ENST00000514485 ADAMTS12P58397 1594 aa37.25■■■■□ 3.55
PACRGL-231ENST00000514485 GRIN2AQ12879 1464 aa37.17■■■■□ 3.54
PACRGL-231ENST00000514485 CEP170Q5SW79 1584 aa37.1■■■■□ 3.53
PACRGL-231ENST00000514485 ERICH3Q5RHP9 1530 aa37.1■■■■□ 3.53
PACRGL-231ENST00000514485 FHAD1B1AJZ9 1412 aa37.03■■■■□ 3.52
PACRGL-231ENST00000514485 NUP160Q12769 1436 aa37.02■■■■□ 3.52
PACRGL-231ENST00000514485 ERCC6L2Q5T890 1561 aa36.99■■■■□ 3.51
PACRGL-231ENST00000514485 SHROOM2Q13796 1616 aa36.93■■■■□ 3.5
PACRGL-231ENST00000514485 TRHP20396 242 aaPredicted RBP36.91■■■■□ 3.5
PACRGL-231ENST00000514485 RUSC2Q8N2Y8 1516 aa36.74■■■■□ 3.47
PACRGL-231ENST00000514485 CUL7Q14999 1698 aa36.67■■■■□ 3.46
PACRGL-231ENST00000514485 KIF27Q86VH2 1401 aa36.64■■■■□ 3.46
PACRGL-231ENST00000514485 PRG4Q92954 1404 aaPredicted RBP36.62■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms