RNA–Protein interactions for RNA: ENST00000514348.1

TMEM173-213, Transcript of transmembrane protein 173, humanhuman

TSL 3

Gene TMEM173, Length 705 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM173-213ENST00000514348 NISCHQ9Y2I1 1504 aa31.04■■■□□ 2.56
TMEM173-213ENST00000514348 CCDC180Q9P1Z9 1646 aa27.81■■■□□ 2.04
TMEM173-213ENST00000514348 ABCC9O60706 1549 aa27.62■■■□□ 2.01
TMEM173-213ENST00000514348 RB1CC1Q8TDY2 1594 aa26.33■■□□□ 1.8
TMEM173-213ENST00000514348 NACADO15069 1562 aa26.16■■□□□ 1.78
TMEM173-213ENST00000514348 DCAF8L2P0C7V8 631 aa26.1■■□□□ 1.77
TMEM173-213ENST00000514348 UNC13AQ9UPW8 1703 aa25.93■■□□□ 1.74
TMEM173-213ENST00000514348 MYO15BQ96JP2 1530 aa25.8■■□□□ 1.72
TMEM173-213ENST00000514348 ZCCHC6Q5VYS8 1495 aaKnown RBP25.79■■□□□ 1.72
TMEM173-213ENST00000514348 PABPN1Q86U42 306 aaKnown RBP eCLIP25.71■■□□□ 1.71
TMEM173-213ENST00000514348 DNAJC5BQ9UF47 199 aa25.67■■□□□ 1.7
TMEM173-213ENST00000514348 BICRAQ9NZM4 1560 aa25.62■■□□□ 1.69
TMEM173-213ENST00000514348 DCAF1Q9Y4B6 1507 aa25.59■■□□□ 1.69
TMEM173-213ENST00000514348 SCRIBQ14160 1630 aa25.44■■□□□ 1.66
TMEM173-213ENST00000514348 SHROOM4Q9ULL8 1493 aa25.13■■□□□ 1.61
TMEM173-213ENST00000514348 CC2D2AQ9P2K1 1620 aa24.97■■□□□ 1.59
TMEM173-213ENST00000514348 EIF4G1Q04637 1599 aaKnown RBP24.94■■□□□ 1.58
TMEM173-213ENST00000514348 CECR2Q9BXF3 1484 aa24.8■■□□□ 1.56
TMEM173-213ENST00000514348 SMARCA4P51532 1647 aa24.24■■□□□ 1.47
TMEM173-213ENST00000514348 ATAD2BQ9ULI0 1458 aa24.13■■□□□ 1.45
TMEM173-213ENST00000514348 NCAPD3P42695 1498 aa24.11■■□□□ 1.45
TMEM173-213ENST00000514348 BAZ1AQ9NRL2 1556 aaPredicted RBP24.08■■□□□ 1.44
TMEM173-213ENST00000514348 SMARCA2P51531 1590 aa24.07■■□□□ 1.44
TMEM173-213ENST00000514348 HMGXB3Q12766 1538 aa24.02■■□□□ 1.44
TMEM173-213ENST00000514348 MROH2BQ7Z745 1585 aa23.99■■□□□ 1.43
TMEM173-213ENST00000514348 BAZ1BQ9UIG0 1483 aaKnown RBP23.93■■□□□ 1.42
TMEM173-213ENST00000514348 PEG3Q9GZU2 1588 aa23.92■■□□□ 1.42
TMEM173-213ENST00000514348 NESP48681 1621 aa23.82■■□□□ 1.4
TMEM173-213ENST00000514348 ERCC6Q03468 1493 aa23.79■■□□□ 1.4
TMEM173-213ENST00000514348 WIZO95785 1651 aa23.76■■□□□ 1.39
TMEM173-213ENST00000514348 CUX2O14529 1486 aa23.62■■□□□ 1.37
TMEM173-213ENST00000514348 RSF1Q96T23 1441 aaPredicted RBP23.61■■□□□ 1.37
TMEM173-213ENST00000514348 LAMC3Q9Y6N6 1575 aa23.61■■□□□ 1.37
TMEM173-213ENST00000514348 KIF21AQ7Z4S6 1674 aa23.59■■□□□ 1.37
TMEM173-213ENST00000514348 THOC2Q8NI27 1593 aaKnown RBP23.54■■□□□ 1.36
TMEM173-213ENST00000514348 CADPSQ9ULU8 1353 aa23.4■■□□□ 1.34
TMEM173-213ENST00000514348 TOP2AP11388 1531 aaKnown RBP23.39■■□□□ 1.34
TMEM173-213ENST00000514348 PDS5BQ9NTI5 1447 aa23.39■■□□□ 1.33
TMEM173-213ENST00000514348 DNAJC5Q9H3Z4 198 aa23.31■■□□□ 1.32
TMEM173-213ENST00000514348 MRC2Q9UBG0 1479 aa23.24■■□□□ 1.31
TMEM173-213ENST00000514348 CFTRP13569 1480 aa23.2■■□□□ 1.3
TMEM173-213ENST00000514348 FANCD2Q9BXW9 1451 aa23.2■■□□□ 1.3
TMEM173-213ENST00000514348 CEP164Q9UPV0 1460 aa23.2■■□□□ 1.3
TMEM173-213ENST00000514348 WDR62O43379 1518 aa23.19■■□□□ 1.3
TMEM173-213ENST00000514348 SUPT5HO00267 1087 aaKnown RBP23.17■■□□□ 1.3
TMEM173-213ENST00000514348 PRDM2Q13029 1718 aa23.16■■□□□ 1.3
TMEM173-213ENST00000514348 CCDC88BA6NC98 1476 aa23.11■■□□□ 1.29
TMEM173-213ENST00000514348 URB2Q14146 1524 aaKnown RBP23.03■■□□□ 1.28
TMEM173-213ENST00000514348 TOPBP1Q92547 1522 aa22.8■■□□□ 1.24
TMEM173-213ENST00000514348 DNMBPQ6XZF7 1577 aa22.75■■□□□ 1.23
TMEM173-213ENST00000514348 ZNF608Q9ULD9 1512 aaPredicted RBP22.72■■□□□ 1.23
TMEM173-213ENST00000514348 IFT140Q96RY7 1462 aa22.69■■□□□ 1.22
TMEM173-213ENST00000514348 EIF4G3O43432 1585 aaKnown RBP22.65■■□□□ 1.22
TMEM173-213ENST00000514348 ABCC8Q09428 1581 aa22.64■■□□□ 1.22
TMEM173-213ENST00000514348 TARBP1Q13395 1621 aaKnown RBP22.62■■□□□ 1.21
TMEM173-213ENST00000514348 POLA1P09884 1462 aaPredicted RBP22.59■■□□□ 1.21
TMEM173-213ENST00000514348 CUX1P39880 1505 aa22.52■■□□□ 1.2
TMEM173-213ENST00000514348 OSCARQ8IYS5 282 aa22.52■■□□□ 1.2
TMEM173-213ENST00000514348 RAD54L2Q9Y4B4 1467 aa22.52■■□□□ 1.2
TMEM173-213ENST00000514348 AQRO60306 1485 aaKnown RBP eCLIP22.51■■□□□ 1.19
TMEM173-213ENST00000514348 CHD1O14646 1710 aa22.5■■□□□ 1.19
TMEM173-213ENST00000514348 TRIM41Q8WV44 630 aa22.49■■□□□ 1.19
TMEM173-213ENST00000514348 FGD5Q6ZNL6 1462 aa22.48■■□□□ 1.19
TMEM173-213ENST00000514348 SOGA1O94964 1423 aa22.43■■□□□ 1.18
TMEM173-213ENST00000514348 WDR97A6NE52 1622 aa22.4■■□□□ 1.18
TMEM173-213ENST00000514348 TDRD9Q8NDG6 1382 aaKnown RBP22.39■■□□□ 1.18
TMEM173-213ENST00000514348 RIMBP3CA6NJZ7 1639 aa22.39■■□□□ 1.17
TMEM173-213ENST00000514348 RIMBP3BA6NNM3 1639 aa22.39■■□□□ 1.17
TMEM173-213ENST00000514348 RIMBP3Q9UFD9 1639 aa22.39■■□□□ 1.17
TMEM173-213ENST00000514348 SNAPC4Q5SXM2 1469 aa22.31■■□□□ 1.16
TMEM173-213ENST00000514348 PBRM1Q86U86 1689 aa22.3■■□□□ 1.16
TMEM173-213ENST00000514348 WRNQ14191 1432 aaPredicted RBP eCLIP22.3■■□□□ 1.16
TMEM173-213ENST00000514348 FBLN2P98095 1184 aa22.29■■□□□ 1.16
TMEM173-213ENST00000514348 ARHGEF11O15085 1522 aa22.29■■□□□ 1.16
TMEM173-213ENST00000514348 SYNJ1O43426 1573 aa22.24■■□□□ 1.15
TMEM173-213ENST00000514348 BIVM-ERCC5R4GMW8 1640 aa22.24■■□□□ 1.15
TMEM173-213ENST00000514348 GRIN2BQ13224 1484 aa22.22■■□□□ 1.15
TMEM173-213ENST00000514348 ABCA5Q8WWZ7 1642 aa22.22■■□□□ 1.15
TMEM173-213ENST00000514348 TOP2BQ02880 1626 aa22.2■■□□□ 1.15
TMEM173-213ENST00000514348 ABCA10Q8WWZ4 1543 aa22.2■■□□□ 1.14
TMEM173-213ENST00000514348 GAPVD1Q14C86 1478 aa22.19■■□□□ 1.14
TMEM173-213ENST00000514348 MAGI1Q96QZ7 1491 aaPredicted RBP22.19■■□□□ 1.14
TMEM173-213ENST00000514348 CLASP1Q7Z460 1538 aa22.14■■□□□ 1.13
TMEM173-213ENST00000514348 SYNJ2O15056 1496 aa22.12■■□□□ 1.13
TMEM173-213ENST00000514348 CHMP7Q8WUX9 453 aaPredicted RBP22.11■■□□□ 1.13
TMEM173-213ENST00000514348 ARAP1Q96P48 1450 aa22.1■■□□□ 1.13
TMEM173-213ENST00000514348 ADAMTS12P58397 1594 aa22.04■■□□□ 1.12
TMEM173-213ENST00000514348 CYB5RLQ6IPT4 315 aa22.04■■□□□ 1.12
TMEM173-213ENST00000514348 GRIN2AQ12879 1464 aa21.96■■□□□ 1.11
TMEM173-213ENST00000514348 CEP170Q5SW79 1584 aa21.94■■□□□ 1.1
TMEM173-213ENST00000514348 ERICH3Q5RHP9 1530 aa21.91■■□□□ 1.1
TMEM173-213ENST00000514348 ERCC6L2Q5T890 1561 aa21.89■■□□□ 1.09
TMEM173-213ENST00000514348 FHAD1B1AJZ9 1412 aa21.89■■□□□ 1.09
TMEM173-213ENST00000514348 NUP160Q12769 1436 aa21.85■■□□□ 1.09
TMEM173-213ENST00000514348 KIF27Q86VH2 1401 aa21.84■■□□□ 1.09
TMEM173-213ENST00000514348 SHROOM2Q13796 1616 aa21.8■■□□□ 1.08
TMEM173-213ENST00000514348 TRHP20396 242 aaPredicted RBP21.74■■□□□ 1.07
TMEM173-213ENST00000514348 RUSC2Q8N2Y8 1516 aa21.74■■□□□ 1.07
TMEM173-213ENST00000514348 IGF1RP08069 1367 aa21.71■■□□□ 1.07
TMEM173-213ENST00000514348 CUL7Q14999 1698 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms