RNA–Protein interactions for RNA: ENST00000514343.1

PTGER4-205, Transcript of prostaglandin E receptor 4, humanhuman

TSL 1 (best)

Gene PTGER4, Length 1,279 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGER4-205ENST00000514343 NISCHQ9Y2I1 1504 aa49.85■■■■■ 5.57
PTGER4-205ENST00000514343 ABCC9O60706 1549 aa45.48■■■■■ 4.87
PTGER4-205ENST00000514343 CCDC180Q9P1Z9 1646 aa44.96■■■■■ 4.79
PTGER4-205ENST00000514343 DNAJC5BQ9UF47 199 aa43.1■■■■■ 4.49
PTGER4-205ENST00000514343 RB1CC1Q8TDY2 1594 aa43.03■■■■■ 4.48
PTGER4-205ENST00000514343 NACADO15069 1562 aa42.59■■■■■ 4.41
PTGER4-205ENST00000514343 DCAF8L2P0C7V8 631 aa42.27■■■■■ 4.36
PTGER4-205ENST00000514343 PABPN1Q86U42 306 aaKnown RBP eCLIP42.24■■■■■ 4.35
PTGER4-205ENST00000514343 UNC13AQ9UPW8 1703 aa42.12■■■■■ 4.33
PTGER4-205ENST00000514343 BICRAQ9NZM4 1560 aa41.84■■■■■ 4.29
PTGER4-205ENST00000514343 MYO15BQ96JP2 1530 aa41.81■■■■■ 4.28
PTGER4-205ENST00000514343 ZCCHC6Q5VYS8 1495 aaKnown RBP41.23■■■■■ 4.19
PTGER4-205ENST00000514343 SHROOM4Q9ULL8 1493 aa41.14■■■■■ 4.18
PTGER4-205ENST00000514343 DCAF1Q9Y4B6 1507 aa41.11■■■■■ 4.17
PTGER4-205ENST00000514343 CC2D2AQ9P2K1 1620 aa41.05■■■■■ 4.16
PTGER4-205ENST00000514343 CECR2Q9BXF3 1484 aa41■■■■■ 4.15
PTGER4-205ENST00000514343 SCRIBQ14160 1630 aa40.99■■■■■ 4.15
PTGER4-205ENST00000514343 EIF4G1Q04637 1599 aaKnown RBP40.84■■■■■ 4.13
PTGER4-205ENST00000514343 DNAJC5Q9H3Z4 198 aa39.88■■■■□ 3.97
PTGER4-205ENST00000514343 CUX2O14529 1486 aa39.35■■■■□ 3.89
PTGER4-205ENST00000514343 NCAPD3P42695 1498 aa39.32■■■■□ 3.89
PTGER4-205ENST00000514343 ERCC6Q03468 1493 aa39.28■■■■□ 3.88
PTGER4-205ENST00000514343 ATAD2BQ9ULI0 1458 aa39.16■■■■□ 3.86
PTGER4-205ENST00000514343 SMARCA4P51532 1647 aa39.03■■■■□ 3.84
PTGER4-205ENST00000514343 HMGXB3Q12766 1538 aa39.01■■■■□ 3.84
PTGER4-205ENST00000514343 SMARCA2P51531 1590 aa39■■■■□ 3.83
PTGER4-205ENST00000514343 NESP48681 1621 aa38.95■■■■□ 3.83
PTGER4-205ENST00000514343 BAZ1BQ9UIG0 1483 aaKnown RBP38.76■■■■□ 3.8
PTGER4-205ENST00000514343 BAZ1AQ9NRL2 1556 aaPredicted RBP38.72■■■■□ 3.79
PTGER4-205ENST00000514343 THOC2Q8NI27 1593 aaKnown RBP38.65■■■■□ 3.78
PTGER4-205ENST00000514343 PEG3Q9GZU2 1588 aa38.61■■■■□ 3.77
PTGER4-205ENST00000514343 LAMC3Q9Y6N6 1575 aa38.53■■■■□ 3.76
PTGER4-205ENST00000514343 KIF21AQ7Z4S6 1674 aa38.44■■■■□ 3.74
PTGER4-205ENST00000514343 MROH2BQ7Z745 1585 aa38.44■■■■□ 3.74
PTGER4-205ENST00000514343 PDS5BQ9NTI5 1447 aa38.29■■■■□ 3.72
PTGER4-205ENST00000514343 CADPSQ9ULU8 1353 aa38.1■■■■□ 3.69
PTGER4-205ENST00000514343 MRC2Q9UBG0 1479 aa38.04■■■■□ 3.68
PTGER4-205ENST00000514343 WDR62O43379 1518 aa37.98■■■■□ 3.67
PTGER4-205ENST00000514343 TRIM41Q8WV44 630 aa37.98■■■■□ 3.67
PTGER4-205ENST00000514343 WIZO95785 1651 aa37.97■■■■□ 3.67
PTGER4-205ENST00000514343 CEP164Q9UPV0 1460 aa37.79■■■■□ 3.64
PTGER4-205ENST00000514343 FANCD2Q9BXW9 1451 aa37.71■■■■□ 3.63
PTGER4-205ENST00000514343 CFTRP13569 1480 aa37.58■■■■□ 3.61
PTGER4-205ENST00000514343 URB2Q14146 1524 aaKnown RBP37.46■■■■□ 3.59
PTGER4-205ENST00000514343 TOP2AP11388 1531 aaKnown RBP37.43■■■■□ 3.58
PTGER4-205ENST00000514343 OSCARQ8IYS5 282 aa37.43■■■■□ 3.58
PTGER4-205ENST00000514343 RSF1Q96T23 1441 aaPredicted RBP37.43■■■■□ 3.58
PTGER4-205ENST00000514343 PRDM2Q13029 1718 aa37.21■■■■□ 3.55
PTGER4-205ENST00000514343 RIMBP3CA6NJZ7 1639 aa37.1■■■■□ 3.53
PTGER4-205ENST00000514343 RIMBP3BA6NNM3 1639 aa37.1■■■■□ 3.53
PTGER4-205ENST00000514343 RIMBP3Q9UFD9 1639 aa37.1■■■■□ 3.53
PTGER4-205ENST00000514343 ZNF608Q9ULD9 1512 aaPredicted RBP37.08■■■■□ 3.53
PTGER4-205ENST00000514343 IFT140Q96RY7 1462 aa37.03■■■■□ 3.52
PTGER4-205ENST00000514343 CCDC88BA6NC98 1476 aa37■■■■□ 3.51
PTGER4-205ENST00000514343 TOPBP1Q92547 1522 aa36.95■■■■□ 3.5
PTGER4-205ENST00000514343 ARHGEF11O15085 1522 aa36.91■■■■□ 3.5
PTGER4-205ENST00000514343 EIF4G3O43432 1585 aaKnown RBP36.87■■■■□ 3.49
PTGER4-205ENST00000514343 DNMBPQ6XZF7 1577 aa36.76■■■■□ 3.48
PTGER4-205ENST00000514343 ABCC8Q09428 1581 aa36.75■■■■□ 3.47
PTGER4-205ENST00000514343 CHD1O14646 1710 aa36.7■■■■□ 3.47
PTGER4-205ENST00000514343 TARBP1Q13395 1621 aaKnown RBP36.67■■■■□ 3.46
PTGER4-205ENST00000514343 AQRO60306 1485 aaKnown RBP eCLIP36.66■■■■□ 3.46
PTGER4-205ENST00000514343 CYB5RLQ6IPT4 315 aa36.63■■■■□ 3.45
PTGER4-205ENST00000514343 POLA1P09884 1462 aaPredicted RBP36.55■■■■□ 3.44
PTGER4-205ENST00000514343 ARAP1Q96P48 1450 aa36.54■■■■□ 3.44
PTGER4-205ENST00000514343 FBLN2P98095 1184 aa36.49■■■■□ 3.43
PTGER4-205ENST00000514343 RAD54L2Q9Y4B4 1467 aa36.43■■■■□ 3.42
PTGER4-205ENST00000514343 TRHP20396 242 aaPredicted RBP36.39■■■■□ 3.42
PTGER4-205ENST00000514343 TDRD9Q8NDG6 1382 aaKnown RBP36.35■■■■□ 3.41
PTGER4-205ENST00000514343 SOGA1O94964 1423 aa36.33■■■■□ 3.41
PTGER4-205ENST00000514343 SNAPC4Q5SXM2 1469 aa36.29■■■■□ 3.4
PTGER4-205ENST00000514343 FGD5Q6ZNL6 1462 aa36.25■■■■□ 3.39
PTGER4-205ENST00000514343 CLASP1Q7Z460 1538 aa36.24■■■■□ 3.39
PTGER4-205ENST00000514343 WDR97A6NE52 1622 aa36.2■■■■□ 3.39
PTGER4-205ENST00000514343 CUX1P39880 1505 aa36.14■■■■□ 3.38
PTGER4-205ENST00000514343 SYNJ1O43426 1573 aa36.14■■■■□ 3.38
PTGER4-205ENST00000514343 MAGI1Q96QZ7 1491 aaPredicted RBP36.12■■■■□ 3.37
PTGER4-205ENST00000514343 CHMP7Q8WUX9 453 aaPredicted RBP36.11■■■■□ 3.37
PTGER4-205ENST00000514343 GRIN2BQ13224 1484 aa36.08■■■■□ 3.37
PTGER4-205ENST00000514343 SYNJ2O15056 1496 aa36.02■■■■□ 3.36
PTGER4-205ENST00000514343 PBRM1Q86U86 1689 aa35.97■■■■□ 3.35
PTGER4-205ENST00000514343 GAPVD1Q14C86 1478 aa35.89■■■■□ 3.34
PTGER4-205ENST00000514343 ABCA5Q8WWZ7 1642 aa35.81■■■■□ 3.32
PTGER4-205ENST00000514343 ABCA10Q8WWZ4 1543 aa35.78■■■■□ 3.32
PTGER4-205ENST00000514343 ERCC6L2Q5T890 1561 aa35.68■■■■□ 3.3
PTGER4-205ENST00000514343 AEBP2Q6ZN18 517 aaPredicted RBP35.67■■■■□ 3.3
PTGER4-205ENST00000514343 GRIN2AQ12879 1464 aa35.63■■■■□ 3.29
PTGER4-205ENST00000514343 ADAMTS12P58397 1594 aa35.59■■■■□ 3.29
PTGER4-205ENST00000514343 CEP170Q5SW79 1584 aa35.57■■■■□ 3.28
PTGER4-205ENST00000514343 NUP160Q12769 1436 aa35.53■■■■□ 3.28
PTGER4-205ENST00000514343 WRNQ14191 1432 aaPredicted RBP eCLIP35.51■■■■□ 3.28
PTGER4-205ENST00000514343 SHROOM2Q13796 1616 aa35.45■■■■□ 3.27
PTGER4-205ENST00000514343 BIVM-ERCC5R4GMW8 1640 aa35.43■■■■□ 3.26
PTGER4-205ENST00000514343 FHAD1B1AJZ9 1412 aa35.4■■■■□ 3.26
PTGER4-205ENST00000514343 TOP2BQ02880 1626 aa35.4■■■■□ 3.26
PTGER4-205ENST00000514343 SUPT5HO00267 1087 aaKnown RBP35.4■■■■□ 3.26
PTGER4-205ENST00000514343 ERICH3Q5RHP9 1530 aa35.31■■■■□ 3.24
PTGER4-205ENST00000514343 KIF13AQ9H1H9 1805 aa35.27■■■■□ 3.24
PTGER4-205ENST00000514343 PRG4Q92954 1404 aaPredicted RBP35.23■■■■□ 3.23
PTGER4-205ENST00000514343 JPH4Q96JJ6 628 aa35.11■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 308.7 ms