RNA–Protein interactions for RNA: ENST00000514278.6

DDX4-212, Transcript of DEAD-box helicase 4, humanhuman

TSL 5 BASIC

Gene DDX4, Length 2,451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-212ENST00000514278 NISCHQ9Y2I1 1504 aa26.79■■□□□ 1.88
DDX4-212ENST00000514278 CCDC180Q9P1Z9 1646 aa23.35■■□□□ 1.33
DDX4-212ENST00000514278 ZCCHC6Q5VYS8 1495 aaKnown RBP22.6■■□□□ 1.21
DDX4-212ENST00000514278 DCAF1Q9Y4B6 1507 aa22.23■■□□□ 1.15
DDX4-212ENST00000514278 SHROOM4Q9ULL8 1493 aa21.9■■□□□ 1.1
DDX4-212ENST00000514278 MYO15BQ96JP2 1530 aa21.85■■□□□ 1.09
DDX4-212ENST00000514278 DCAF8L2P0C7V8 631 aa21.73■■□□□ 1.07
DDX4-212ENST00000514278 NACADO15069 1562 aa21.57■■□□□ 1.04
DDX4-212ENST00000514278 ABCC9O60706 1549 aa21.53■■□□□ 1.04
DDX4-212ENST00000514278 SCRIBQ14160 1630 aa21.37■■□□□ 1.01
DDX4-212ENST00000514278 RB1CC1Q8TDY2 1594 aa21.3■■□□□ 1
DDX4-212ENST00000514278 SUPT5HO00267 1087 aaKnown RBP21.2■□□□□ 0.98
DDX4-212ENST00000514278 UNC13AQ9UPW8 1703 aa21.01■□□□□ 0.95
DDX4-212ENST00000514278 RSF1Q96T23 1441 aaPredicted RBP20.85■□□□□ 0.93
DDX4-212ENST00000514278 CECR2Q9BXF3 1484 aa20.72■□□□□ 0.91
DDX4-212ENST00000514278 MROH2BQ7Z745 1585 aa20.68■□□□□ 0.9
DDX4-212ENST00000514278 BAZ1AQ9NRL2 1556 aaPredicted RBP20.68■□□□□ 0.9
DDX4-212ENST00000514278 BICRAQ9NZM4 1560 aa20.66■□□□□ 0.9
DDX4-212ENST00000514278 WIZO95785 1651 aa20.58■□□□□ 0.88
DDX4-212ENST00000514278 SMARCA4P51532 1647 aa20.57■□□□□ 0.88
DDX4-212ENST00000514278 CHIC1Q5VXU3 224 aa20.56■□□□□ 0.88
DDX4-212ENST00000514278 TOP2AP11388 1531 aaKnown RBP20.39■□□□□ 0.85
DDX4-212ENST00000514278 PEG3Q9GZU2 1588 aa20.34■□□□□ 0.85
DDX4-212ENST00000514278 PABPN1Q86U42 306 aaKnown RBP eCLIP20.27■□□□□ 0.84
DDX4-212ENST00000514278 EIF4G1Q04637 1599 aaKnown RBP20.25■□□□□ 0.83
DDX4-212ENST00000514278 SMARCA2P51531 1590 aa20.21■□□□□ 0.83
DDX4-212ENST00000514278 CCDC88BA6NC98 1476 aa20.11■□□□□ 0.81
DDX4-212ENST00000514278 ATAD2BQ9ULI0 1458 aa20.07■□□□□ 0.8
DDX4-212ENST00000514278 BAZ1BQ9UIG0 1483 aaKnown RBP19.97■□□□□ 0.79
DDX4-212ENST00000514278 TRIM41Q8WV44 630 aa19.96■□□□□ 0.79
DDX4-212ENST00000514278 HMGXB3Q12766 1538 aa19.93■□□□□ 0.78
DDX4-212ENST00000514278 NCAPD3P42695 1498 aa19.85■□□□□ 0.77
DDX4-212ENST00000514278 ABCC8Q09428 1581 aa19.8■□□□□ 0.76
DDX4-212ENST00000514278 LOC105371045A0A1W2PR82 267 aa19.71■□□□□ 0.75
DDX4-212ENST00000514278 PRDM2Q13029 1718 aa19.67■□□□□ 0.74
DDX4-212ENST00000514278 WRNQ14191 1432 aaPredicted RBP eCLIP19.62■□□□□ 0.73
DDX4-212ENST00000514278 CC2D2AQ9P2K1 1620 aa19.6■□□□□ 0.73
DDX4-212ENST00000514278 SYNJ1O43426 1573 aa19.59■□□□□ 0.73
DDX4-212ENST00000514278 EEA1Q15075 1411 aa19.58■□□□□ 0.73
DDX4-212ENST00000514278 BIVM-ERCC5R4GMW8 1640 aa19.55■□□□□ 0.72
DDX4-212ENST00000514278 FAM9AQ8IZU1 332 aaPredicted RBP19.53■□□□□ 0.72
DDX4-212ENST00000514278 TOP2BQ02880 1626 aa19.52■□□□□ 0.72
DDX4-212ENST00000514278 CFTRP13569 1480 aa19.5■□□□□ 0.71
DDX4-212ENST00000514278 SOGA1O94964 1423 aa19.44■□□□□ 0.7
DDX4-212ENST00000514278 KIF21BO75037 1637 aa19.37■□□□□ 0.69
DDX4-212ENST00000514278 RUSC2Q8N2Y8 1516 aa19.36■□□□□ 0.69
DDX4-212ENST00000514278 CUX1P39880 1505 aa19.33■□□□□ 0.68
DDX4-212ENST00000514278 CADPSQ9ULU8 1353 aa19.32■□□□□ 0.68
DDX4-212ENST00000514278 CSRNP3Q8WYN3 585 aa19.31■□□□□ 0.68
DDX4-212ENST00000514278 GOLGA3Q08378 1498 aa19.3■□□□□ 0.68
DDX4-212ENST00000514278 TNIKQ9UKE5 1360 aa19.28■□□□□ 0.68
DDX4-212ENST00000514278 CEP164Q9UPV0 1460 aa19.27■□□□□ 0.68
DDX4-212ENST00000514278 LAMC3Q9Y6N6 1575 aa19.19■□□□□ 0.66
DDX4-212ENST00000514278 CEP162Q5TB80 1403 aa19.18■□□□□ 0.66
DDX4-212ENST00000514278 EHMT2Q96KQ7 1210 aa19.17■□□□□ 0.66
DDX4-212ENST00000514278 PCGF6Q9BYE7 350 aa19.17■□□□□ 0.66
DDX4-212ENST00000514278 TRIM26Q12899 539 aaPredicted RBP19.16■□□□□ 0.66
DDX4-212ENST00000514278 ERICH3Q5RHP9 1530 aa19.16■□□□□ 0.66
DDX4-212ENST00000514278 FANCD2Q9BXW9 1451 aa19.13■□□□□ 0.65
DDX4-212ENST00000514278 DNMBPQ6XZF7 1577 aa19.1■□□□□ 0.65
DDX4-212ENST00000514278 KIF27Q86VH2 1401 aa19.09■□□□□ 0.65
DDX4-212ENST00000514278 PRXQ9BXM0 1461 aa19.09■□□□□ 0.65
DDX4-212ENST00000514278 RAPGEF2Q9Y4G8 1499 aa19.06■□□□□ 0.64
DDX4-212ENST00000514278 FGD5Q6ZNL6 1462 aa19.05■□□□□ 0.64
DDX4-212ENST00000514278 UBTFP17480 764 aaKnown RBP19.03■□□□□ 0.64
DDX4-212ENST00000514278 NESP48681 1621 aa19.03■□□□□ 0.64
DDX4-212ENST00000514278 TOPBP1Q92547 1522 aa18.99■□□□□ 0.63
DDX4-212ENST00000514278 HRCP23327 699 aa18.98■□□□□ 0.63
DDX4-212ENST00000514278 WDR97A6NE52 1622 aa18.96■□□□□ 0.63
DDX4-212ENST00000514278 CUX2O14529 1486 aa18.95■□□□□ 0.62
DDX4-212ENST00000514278 KIF21AQ7Z4S6 1674 aa18.95■□□□□ 0.62
DDX4-212ENST00000514278 CLIP1P30622 1438 aa18.95■□□□□ 0.62
DDX4-212ENST00000514278 PDS5BQ9NTI5 1447 aa18.93■□□□□ 0.62
DDX4-212ENST00000514278 ABCA10Q8WWZ4 1543 aa18.93■□□□□ 0.62
DDX4-212ENST00000514278 POLA1P09884 1462 aaPredicted RBP18.91■□□□□ 0.62
DDX4-212ENST00000514278 URB2Q14146 1524 aaKnown RBP18.89■□□□□ 0.61
DDX4-212ENST00000514278 VPS8Q8N3P4 1428 aa18.87■□□□□ 0.61
DDX4-212ENST00000514278 CUL7Q14999 1698 aa18.86■□□□□ 0.61
DDX4-212ENST00000514278 IGF1RP08069 1367 aa18.85■□□□□ 0.61
DDX4-212ENST00000514278 ABCA5Q8WWZ7 1642 aa18.8■□□□□ 0.6
DDX4-212ENST00000514278 RAD54L2Q9Y4B4 1467 aa18.8■□□□□ 0.6
DDX4-212ENST00000514278 DNAJC5BQ9UF47 199 aa18.78■□□□□ 0.6
DDX4-212ENST00000514278 ARAP1Q96P48 1450 aa18.77■□□□□ 0.6
DDX4-212ENST00000514278 CARMIL1Q5VZK9 1371 aa18.76■□□□□ 0.59
DDX4-212ENST00000514278 CTTNBP2Q8WZ74 1663 aa18.74■□□□□ 0.59
DDX4-212ENST00000514278 TARBP1Q13395 1621 aaKnown RBP18.74■□□□□ 0.59
DDX4-212ENST00000514278 MRC2Q9UBG0 1479 aa18.7■□□□□ 0.58
DDX4-212ENST00000514278 PPARGC1BQ86YN6 1023 aaKnown RBP18.69■□□□□ 0.58
DDX4-212ENST00000514278 ARHGAP35Q9NRY4 1499 aa18.69■□□□□ 0.58
DDX4-212ENST00000514278 PBRM1Q86U86 1689 aa18.66■□□□□ 0.58
DDX4-212ENST00000514278 WDR62O43379 1518 aa18.64■□□□□ 0.57
DDX4-212ENST00000514278 GAPVD1Q14C86 1478 aa18.64■□□□□ 0.57
DDX4-212ENST00000514278 ZEB1P37275 1124 aaPredicted RBP18.62■□□□□ 0.57
DDX4-212ENST00000514278 EFCAB5A4FU69 1503 aa18.61■□□□□ 0.57
DDX4-212ENST00000514278 APLP2Q06481 763 aa18.57■□□□□ 0.56
DDX4-212ENST00000514278 MAP3K1Q13233 1512 aa18.57■□□□□ 0.56
DDX4-212ENST00000514278 THOC2Q8NI27 1593 aaKnown RBP18.54■□□□□ 0.56
DDX4-212ENST00000514278 RANGAP1P46060 587 aaPredicted RBP18.54■□□□□ 0.56
DDX4-212ENST00000514278 TDRD9Q8NDG6 1382 aaKnown RBP18.53■□□□□ 0.56
DDX4-212ENST00000514278 IFT140Q96RY7 1462 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms