RNA–Protein interactions for RNA: ENST00000514242.5

TGFBI-212, Transcript of transforming growth factor beta induced, humanhuman

TSL 2

Gene TGFBI, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBI-212ENST00000514242 NISCHQ9Y2I1 1504 aa29■■■□□ 2.23
TGFBI-212ENST00000514242 ABCC9O60706 1549 aa26.23■■□□□ 1.79
TGFBI-212ENST00000514242 CCDC180Q9P1Z9 1646 aa26.04■■□□□ 1.76
TGFBI-212ENST00000514242 RB1CC1Q8TDY2 1594 aa24.85■■□□□ 1.57
TGFBI-212ENST00000514242 DNAJC5BQ9UF47 199 aa24.81■■□□□ 1.56
TGFBI-212ENST00000514242 NACADO15069 1562 aa24.66■■□□□ 1.54
TGFBI-212ENST00000514242 DCAF8L2P0C7V8 631 aa24.51■■□□□ 1.51
TGFBI-212ENST00000514242 PABPN1Q86U42 306 aaKnown RBP eCLIP24.42■■□□□ 1.54e-7■□□□□ 9.9
TGFBI-212ENST00000514242 UNC13AQ9UPW8 1703 aa24.35■■□□□ 1.49
TGFBI-212ENST00000514242 MYO15BQ96JP2 1530 aa24.28■■□□□ 1.48
TGFBI-212ENST00000514242 BICRAQ9NZM4 1560 aa24.21■■□□□ 1.47
TGFBI-212ENST00000514242 ZCCHC6Q5VYS8 1495 aaKnown RBP24■■□□□ 1.43
TGFBI-212ENST00000514242 DCAF1Q9Y4B6 1507 aa23.92■■□□□ 1.42
TGFBI-212ENST00000514242 SHROOM4Q9ULL8 1493 aa23.78■■□□□ 1.4
TGFBI-212ENST00000514242 SCRIBQ14160 1630 aa23.76■■□□□ 1.39
TGFBI-212ENST00000514242 CC2D2AQ9P2K1 1620 aa23.68■■□□□ 1.38
TGFBI-212ENST00000514242 CECR2Q9BXF3 1484 aa23.63■■□□□ 1.37
TGFBI-212ENST00000514242 EIF4G1Q04637 1599 aaKnown RBP23.59■■□□□ 1.37
TGFBI-212ENST00000514242 DNAJC5Q9H3Z4 198 aa22.82■■□□□ 1.24
TGFBI-212ENST00000514242 NCAPD3P42695 1498 aa22.79■■□□□ 1.24
TGFBI-212ENST00000514242 ATAD2BQ9ULI0 1458 aa22.72■■□□□ 1.23
TGFBI-212ENST00000514242 SMARCA4P51532 1647 aa22.64■■□□□ 1.22
TGFBI-212ENST00000514242 CUX2O14529 1486 aa22.62■■□□□ 1.21
TGFBI-212ENST00000514242 ERCC6Q03468 1493 aa22.6■■□□□ 1.21
TGFBI-212ENST00000514242 SMARCA2P51531 1590 aa22.59■■□□□ 1.21
TGFBI-212ENST00000514242 HMGXB3Q12766 1538 aa22.59■■□□□ 1.21
TGFBI-212ENST00000514242 NESP48681 1621 aa22.52■■□□□ 1.2
TGFBI-212ENST00000514242 BAZ1AQ9NRL2 1556 aaPredicted RBP22.49■■□□□ 1.19
TGFBI-212ENST00000514242 BAZ1BQ9UIG0 1483 aaKnown RBP22.46■■□□□ 1.19
TGFBI-212ENST00000514242 PEG3Q9GZU2 1588 aa22.42■■□□□ 1.18
TGFBI-212ENST00000514242 MROH2BQ7Z745 1585 aa22.37■■□□□ 1.17
TGFBI-212ENST00000514242 THOC2Q8NI27 1593 aaKnown RBP22.29■■□□□ 1.16
TGFBI-212ENST00000514242 LAMC3Q9Y6N6 1575 aa22.27■■□□□ 1.16
TGFBI-212ENST00000514242 KIF21AQ7Z4S6 1674 aa22.19■■□□□ 1.14
TGFBI-212ENST00000514242 PDS5BQ9NTI5 1447 aa22.14■■□□□ 1.14
TGFBI-212ENST00000514242 CADPSQ9ULU8 1353 aa22.09■■□□□ 1.13
TGFBI-212ENST00000514242 WIZO95785 1651 aa22.08■■□□□ 1.13
TGFBI-212ENST00000514242 MRC2Q9UBG0 1479 aa21.98■■□□□ 1.11
TGFBI-212ENST00000514242 WDR62O43379 1518 aa21.94■■□□□ 1.1
TGFBI-212ENST00000514242 CEP164Q9UPV0 1460 aa21.85■■□□□ 1.09
TGFBI-212ENST00000514242 RSF1Q96T23 1441 aaPredicted RBP21.85■■□□□ 1.09
TGFBI-212ENST00000514242 FANCD2Q9BXW9 1451 aa21.83■■□□□ 1.09
TGFBI-212ENST00000514242 CFTRP13569 1480 aa21.81■■□□□ 1.08
TGFBI-212ENST00000514242 TOP2AP11388 1531 aaKnown RBP21.77■■□□□ 1.08
TGFBI-212ENST00000514242 TRIM41Q8WV44 630 aa21.74■■□□□ 1.07
TGFBI-212ENST00000514242 URB2Q14146 1524 aaKnown RBP21.7■■□□□ 1.06
TGFBI-212ENST00000514242 OSCARQ8IYS5 282 aa21.57■■□□□ 1.04
TGFBI-212ENST00000514242 CCDC88BA6NC98 1476 aa21.55■■□□□ 1.04
TGFBI-212ENST00000514242 PRDM2Q13029 1718 aa21.55■■□□□ 1.04
TGFBI-212ENST00000514242 ZNF608Q9ULD9 1512 aaPredicted RBP21.47■■□□□ 1.03
TGFBI-212ENST00000514242 IFT140Q96RY7 1462 aa21.43■■□□□ 1.02
TGFBI-212ENST00000514242 TOPBP1Q92547 1522 aa21.42■■□□□ 1.02
TGFBI-212ENST00000514242 RIMBP3CA6NJZ7 1639 aa21.34■■□□□ 1.01
TGFBI-212ENST00000514242 RIMBP3BA6NNM3 1639 aa21.34■■□□□ 1.01
TGFBI-212ENST00000514242 RIMBP3Q9UFD9 1639 aa21.34■■□□□ 1.01
TGFBI-212ENST00000514242 DNMBPQ6XZF7 1577 aa21.31■■□□□ 1
TGFBI-212ENST00000514242 ABCC8Q09428 1581 aa21.31■■□□□ 1
TGFBI-212ENST00000514242 EIF4G3O43432 1585 aaKnown RBP21.3■■□□□ 1
TGFBI-212ENST00000514242 TARBP1Q13395 1621 aaKnown RBP21.25■□□□□ 0.99
TGFBI-212ENST00000514242 ARHGEF11O15085 1522 aa21.24■□□□□ 0.99
TGFBI-212ENST00000514242 AQRO60306 1485 aaKnown RBP eCLIP21.24■□□□□ 0.993e-9■■□□□ 11.6
TGFBI-212ENST00000514242 POLA1P09884 1462 aaPredicted RBP21.2■□□□□ 0.98
TGFBI-212ENST00000514242 CHD1O14646 1710 aa21.17■□□□□ 0.98
TGFBI-212ENST00000514242 RAD54L2Q9Y4B4 1467 aa21.14■□□□□ 0.98
TGFBI-212ENST00000514242 CYB5RLQ6IPT4 315 aa21.1■□□□□ 0.97
TGFBI-212ENST00000514242 TDRD9Q8NDG6 1382 aaKnown RBP21.09■□□□□ 0.97
TGFBI-212ENST00000514242 SOGA1O94964 1423 aa21.08■□□□□ 0.97
TGFBI-212ENST00000514242 FBLN2P98095 1184 aa21.08■□□□□ 0.97
TGFBI-212ENST00000514242 ARAP1Q96P48 1450 aa21.05■□□□□ 0.96
TGFBI-212ENST00000514242 FGD5Q6ZNL6 1462 aa21.04■□□□□ 0.96
TGFBI-212ENST00000514242 CUX1P39880 1505 aa21.02■□□□□ 0.96
TGFBI-212ENST00000514242 SNAPC4Q5SXM2 1469 aa21.01■□□□□ 0.95
TGFBI-212ENST00000514242 WDR97A6NE52 1622 aa20.96■□□□□ 0.95
TGFBI-212ENST00000514242 CLASP1Q7Z460 1538 aa20.94■□□□□ 0.94
TGFBI-212ENST00000514242 MAGI1Q96QZ7 1491 aaPredicted RBP20.91■□□□□ 0.94
TGFBI-212ENST00000514242 GRIN2BQ13224 1484 aa20.9■□□□□ 0.94
TGFBI-212ENST00000514242 CHMP7Q8WUX9 453 aaPredicted RBP20.9■□□□□ 0.94
TGFBI-212ENST00000514242 TRHP20396 242 aaPredicted RBP20.88■□□□□ 0.93
TGFBI-212ENST00000514242 SYNJ1O43426 1573 aa20.86■□□□□ 0.93
TGFBI-212ENST00000514242 SYNJ2O15056 1496 aa20.85■□□□□ 0.93
TGFBI-212ENST00000514242 GAPVD1Q14C86 1478 aa20.81■□□□□ 0.92
TGFBI-212ENST00000514242 PBRM1Q86U86 1689 aa20.81■□□□□ 0.92
TGFBI-212ENST00000514242 ABCA10Q8WWZ4 1543 aa20.78■□□□□ 0.92
TGFBI-212ENST00000514242 ABCA5Q8WWZ7 1642 aa20.78■□□□□ 0.92
TGFBI-212ENST00000514242 SUPT5HO00267 1087 aaKnown RBP20.75■□□□□ 0.91
TGFBI-212ENST00000514242 ERCC6L2Q5T890 1561 aa20.64■□□□□ 0.9
TGFBI-212ENST00000514242 GRIN2AQ12879 1464 aa20.64■□□□□ 0.89
TGFBI-212ENST00000514242 WRNQ14191 1432 aaPredicted RBP eCLIP20.64■□□□□ 0.89
TGFBI-212ENST00000514242 BIVM-ERCC5R4GMW8 1640 aa20.62■□□□□ 0.89
TGFBI-212ENST00000514242 ADAMTS12P58397 1594 aa20.62■□□□□ 0.89
TGFBI-212ENST00000514242 TOP2BQ02880 1626 aa20.61■□□□□ 0.89
TGFBI-212ENST00000514242 CEP170Q5SW79 1584 aa20.6■□□□□ 0.89
TGFBI-212ENST00000514242 NUP160Q12769 1436 aa20.6■□□□□ 0.89
TGFBI-212ENST00000514242 FHAD1B1AJZ9 1412 aa20.54■□□□□ 0.88
TGFBI-212ENST00000514242 SHROOM2Q13796 1616 aa20.52■□□□□ 0.88
TGFBI-212ENST00000514242 ERICH3Q5RHP9 1530 aa20.5■□□□□ 0.87
TGFBI-212ENST00000514242 PRG4Q92954 1404 aaPredicted RBP20.4■□□□□ 0.86
TGFBI-212ENST00000514242 JPH4Q96JJ6 628 aa20.38■□□□□ 0.85
TGFBI-212ENST00000514242 AEBP2Q6ZN18 517 aaPredicted RBP20.34■□□□□ 0.85
TGFBI-212ENST00000514242 RUSC2Q8N2Y8 1516 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms