RNA–Protein interactions for RNA: ENST00000514212.5

ABLIM3-208, Transcript of actin binding LIM protein family member 3, humanhuman

TSL 4

Gene ABLIM3, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABLIM3-208ENST00000514212 NISCHQ9Y2I1 1504 aa19.98■□□□□ 0.79
ABLIM3-208ENST00000514212 CCDC180Q9P1Z9 1646 aa17.74■□□□□ 0.43
ABLIM3-208ENST00000514212 ABCC9O60706 1549 aa16.97■□□□□ 0.31
ABLIM3-208ENST00000514212 ZCCHC6Q5VYS8 1495 aaKnown RBP16.72■□□□□ 0.27
ABLIM3-208ENST00000514212 DCAF1Q9Y4B6 1507 aa16.63■□□□□ 0.25
ABLIM3-208ENST00000514212 MYO15BQ96JP2 1530 aa16.62■□□□□ 0.25
ABLIM3-208ENST00000514212 NACADO15069 1562 aa16.61■□□□□ 0.25
ABLIM3-208ENST00000514212 RB1CC1Q8TDY2 1594 aa16.56■□□□□ 0.24
ABLIM3-208ENST00000514212 DCAF8L2P0C7V8 631 aa16.54■□□□□ 0.24
ABLIM3-208ENST00000514212 UNC13AQ9UPW8 1703 aa16.11■□□□□ 0.17
ABLIM3-208ENST00000514212 SCRIBQ14160 1630 aa16.1■□□□□ 0.17
ABLIM3-208ENST00000514212 SHROOM4Q9ULL8 1493 aa15.99■□□□□ 0.15
ABLIM3-208ENST00000514212 BICRAQ9NZM4 1560 aa15.93■□□□□ 0.14
ABLIM3-208ENST00000514212 PABPN1Q86U42 306 aaKnown RBP eCLIP15.85■□□□□ 0.13
ABLIM3-208ENST00000514212 EIF4G1Q04637 1599 aaKnown RBP15.55■□□□□ 0.08
ABLIM3-208ENST00000514212 BAZ1AQ9NRL2 1556 aaPredicted RBP15.53■□□□□ 0.08
ABLIM3-208ENST00000514212 SMARCA4P51532 1647 aa15.46■□□□□ 0.07
ABLIM3-208ENST00000514212 CECR2Q9BXF3 1484 aa15.44■□□□□ 0.06
ABLIM3-208ENST00000514212 CC2D2AQ9P2K1 1620 aa15.4■□□□□ 0.06
ABLIM3-208ENST00000514212 SMARCA2P51531 1590 aa15.37■□□□□ 0.05
ABLIM3-208ENST00000514212 MROH2BQ7Z745 1585 aa15.35■□□□□ 0.05
ABLIM3-208ENST00000514212 PEG3Q9GZU2 1588 aa15.34■□□□□ 0.05
ABLIM3-208ENST00000514212 ATAD2BQ9ULI0 1458 aa15.29■□□□□ 0.04
ABLIM3-208ENST00000514212 RSF1Q96T23 1441 aaPredicted RBP15.28■□□□□ 0.04
ABLIM3-208ENST00000514212 NCAPD3P42695 1498 aa15.27■□□□□ 0.04
ABLIM3-208ENST00000514212 HMGXB3Q12766 1538 aa15.27■□□□□ 0.03
ABLIM3-208ENST00000514212 BAZ1BQ9UIG0 1483 aaKnown RBP15.22■□□□□ 0.03
ABLIM3-208ENST00000514212 DNAJC5BQ9UF47 199 aa15.22■□□□□ 0.03
ABLIM3-208ENST00000514212 WIZO95785 1651 aa15.2■□□□□ 0.02
ABLIM3-208ENST00000514212 TOP2AP11388 1531 aaKnown RBP15.13■□□□□ 0.01
ABLIM3-208ENST00000514212 SUPT5HO00267 1087 aaKnown RBP15.06■□□□□ 0
ABLIM3-208ENST00000514212 CCDC88BA6NC98 1476 aa14.89□□□□□ -0.03
ABLIM3-208ENST00000514212 LAMC3Q9Y6N6 1575 aa14.88□□□□□ -0.03
ABLIM3-208ENST00000514212 CADPSQ9ULU8 1353 aa14.84□□□□□ -0.03
ABLIM3-208ENST00000514212 CFTRP13569 1480 aa14.81□□□□□ -0.04
ABLIM3-208ENST00000514212 PRDM2Q13029 1718 aa14.79□□□□□ -0.04
ABLIM3-208ENST00000514212 PDS5BQ9NTI5 1447 aa14.77□□□□□ -0.04
ABLIM3-208ENST00000514212 NESP48681 1621 aa14.72□□□□□ -0.05
ABLIM3-208ENST00000514212 ERCC6Q03468 1493 aa14.7□□□□□ -0.06
ABLIM3-208ENST00000514212 FANCD2Q9BXW9 1451 aa14.66□□□□□ -0.06
ABLIM3-208ENST00000514212 CEP164Q9UPV0 1460 aa14.66□□□□□ -0.06
ABLIM3-208ENST00000514212 KIF21AQ7Z4S6 1674 aa14.63□□□□□ -0.07
ABLIM3-208ENST00000514212 ABCC8Q09428 1581 aa14.58□□□□□ -0.08
ABLIM3-208ENST00000514212 MRC2Q9UBG0 1479 aa14.57□□□□□ -0.08
ABLIM3-208ENST00000514212 THOC2Q8NI27 1593 aaKnown RBP14.53□□□□□ -0.08
ABLIM3-208ENST00000514212 WDR62O43379 1518 aa14.51□□□□□ -0.09
ABLIM3-208ENST00000514212 DNMBPQ6XZF7 1577 aa14.49□□□□□ -0.09
ABLIM3-208ENST00000514212 CUX2O14529 1486 aa14.49□□□□□ -0.09
ABLIM3-208ENST00000514212 WRNQ14191 1432 aaPredicted RBP eCLIP14.46□□□□□ -0.09
ABLIM3-208ENST00000514212 URB2Q14146 1524 aaKnown RBP14.46□□□□□ -0.1
ABLIM3-208ENST00000514212 TOPBP1Q92547 1522 aa14.45□□□□□ -0.1
ABLIM3-208ENST00000514212 TOP2BQ02880 1626 aa14.41□□□□□ -0.1
ABLIM3-208ENST00000514212 BIVM-ERCC5R4GMW8 1640 aa14.41□□□□□ -0.1
ABLIM3-208ENST00000514212 CUX1P39880 1505 aa14.4□□□□□ -0.1
ABLIM3-208ENST00000514212 SYNJ1O43426 1573 aa14.34□□□□□ -0.11
ABLIM3-208ENST00000514212 POLA1P09884 1462 aaPredicted RBP14.34□□□□□ -0.11
ABLIM3-208ENST00000514212 IFT140Q96RY7 1462 aa14.34□□□□□ -0.11
ABLIM3-208ENST00000514212 FGD5Q6ZNL6 1462 aa14.33□□□□□ -0.12
ABLIM3-208ENST00000514212 WDR97A6NE52 1622 aa14.31□□□□□ -0.12
ABLIM3-208ENST00000514212 SOGA1O94964 1423 aa14.29□□□□□ -0.12
ABLIM3-208ENST00000514212 TRIM41Q8WV44 630 aa14.28□□□□□ -0.12
ABLIM3-208ENST00000514212 TARBP1Q13395 1621 aaKnown RBP14.26□□□□□ -0.13
ABLIM3-208ENST00000514212 ABCA10Q8WWZ4 1543 aa14.25□□□□□ -0.13
ABLIM3-208ENST00000514212 RAD54L2Q9Y4B4 1467 aa14.21□□□□□ -0.13
ABLIM3-208ENST00000514212 CHIC1Q5VXU3 224 aa14.2□□□□□ -0.14
ABLIM3-208ENST00000514212 EIF4G3O43432 1585 aaKnown RBP14.17□□□□□ -0.14
ABLIM3-208ENST00000514212 KIF27Q86VH2 1401 aa14.17□□□□□ -0.14
ABLIM3-208ENST00000514212 ABCA5Q8WWZ7 1642 aa14.15□□□□□ -0.14
ABLIM3-208ENST00000514212 GAPVD1Q14C86 1478 aa14.15□□□□□ -0.14
ABLIM3-208ENST00000514212 ZNF608Q9ULD9 1512 aaPredicted RBP14.14□□□□□ -0.15
ABLIM3-208ENST00000514212 GRIN2BQ13224 1484 aa14.13□□□□□ -0.15
ABLIM3-208ENST00000514212 EEA1Q15075 1411 aa14.13□□□□□ -0.15
ABLIM3-208ENST00000514212 TDRD9Q8NDG6 1382 aaKnown RBP14.12□□□□□ -0.15
ABLIM3-208ENST00000514212 ERICH3Q5RHP9 1530 aa14.12□□□□□ -0.15
ABLIM3-208ENST00000514212 PBRM1Q86U86 1689 aa14.11□□□□□ -0.15
ABLIM3-208ENST00000514212 AQRO60306 1485 aaKnown RBP eCLIP14.11□□□□□ -0.15
ABLIM3-208ENST00000514212 MAGI1Q96QZ7 1491 aaPredicted RBP14.09□□□□□ -0.15
ABLIM3-208ENST00000514212 CUL7Q14999 1698 aa14.06□□□□□ -0.16
ABLIM3-208ENST00000514212 SNAPC4Q5SXM2 1469 aa14.03□□□□□ -0.16
ABLIM3-208ENST00000514212 FHAD1B1AJZ9 1412 aa14.01□□□□□ -0.17
ABLIM3-208ENST00000514212 ADAMTS12P58397 1594 aa14□□□□□ -0.17
ABLIM3-208ENST00000514212 SYNJ2O15056 1496 aa14□□□□□ -0.17
ABLIM3-208ENST00000514212 IGF1RP08069 1367 aa13.99□□□□□ -0.17
ABLIM3-208ENST00000514212 CHMP7Q8WUX9 453 aaPredicted RBP13.98□□□□□ -0.17
ABLIM3-208ENST00000514212 CARMIL1Q5VZK9 1371 aa13.96□□□□□ -0.17
ABLIM3-208ENST00000514212 CSRNP3Q8WYN3 585 aa13.96□□□□□ -0.17
ABLIM3-208ENST00000514212 RUSC2Q8N2Y8 1516 aa13.95□□□□□ -0.18
ABLIM3-208ENST00000514212 GRIN2AQ12879 1464 aa13.93□□□□□ -0.18
ABLIM3-208ENST00000514212 RAPGEF2Q9Y4G8 1499 aa13.93□□□□□ -0.18
ABLIM3-208ENST00000514212 CHD1O14646 1710 aa13.93□□□□□ -0.18
ABLIM3-208ENST00000514212 FBLN2P98095 1184 aa13.93□□□□□ -0.18
ABLIM3-208ENST00000514212 PRXQ9BXM0 1461 aa13.91□□□□□ -0.18
ABLIM3-208ENST00000514212 KIF21BO75037 1637 aa13.9□□□□□ -0.19
ABLIM3-208ENST00000514212 OSCARQ8IYS5 282 aa13.88□□□□□ -0.19
ABLIM3-208ENST00000514212 FAM9AQ8IZU1 332 aaPredicted RBP13.88□□□□□ -0.19
ABLIM3-208ENST00000514212 NUP160Q12769 1436 aa13.85□□□□□ -0.19
ABLIM3-208ENST00000514212 GOLGA3Q08378 1498 aa13.84□□□□□ -0.19
ABLIM3-208ENST00000514212 CTTNBP2Q8WZ74 1663 aa13.81□□□□□ -0.2
ABLIM3-208ENST00000514212 KIAA0586Q9BVV6 1533 aa13.8□□□□□ -0.2
ABLIM3-208ENST00000514212 CEP170Q5SW79 1584 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms