RNA–Protein interactions for RNA: ENST00000514118.5

AP3S1-207, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5

Gene AP3S1, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-207ENST00000514118 NISCHQ9Y2I1 1504 aa28.53■■■□□ 2.16
AP3S1-207ENST00000514118 CCDC180Q9P1Z9 1646 aa25.43■■□□□ 1.66
AP3S1-207ENST00000514118 ABCC9O60706 1549 aa24.95■■□□□ 1.58
AP3S1-207ENST00000514118 RB1CC1Q8TDY2 1594 aa23.98■■□□□ 1.43
AP3S1-207ENST00000514118 NACADO15069 1562 aa23.95■■□□□ 1.42
AP3S1-207ENST00000514118 MYO15BQ96JP2 1530 aa23.81■■□□□ 1.4
AP3S1-207ENST00000514118 DCAF8L2P0C7V8 631 aa23.77■■□□□ 1.4
AP3S1-207ENST00000514118 ZCCHC6Q5VYS8 1495 aaKnown RBP23.76■■□□□ 1.39
AP3S1-207ENST00000514118 DCAF1Q9Y4B6 1507 aa23.64■■□□□ 1.38
AP3S1-207ENST00000514118 UNC13AQ9UPW8 1703 aa23.41■■□□□ 1.34
AP3S1-207ENST00000514118 PABPN1Q86U42 306 aaKnown RBP eCLIP23.27■■□□□ 1.32
AP3S1-207ENST00000514118 BICRAQ9NZM4 1560 aa23.27■■□□□ 1.32
AP3S1-207ENST00000514118 SCRIBQ14160 1630 aa23.15■■□□□ 1.3
AP3S1-207ENST00000514118 SHROOM4Q9ULL8 1493 aa23.07■■□□□ 1.28
AP3S1-207ENST00000514118 DNAJC5BQ9UF47 199 aa23.01■■□□□ 1.27
AP3S1-207ENST00000514118 EIF4G1Q04637 1599 aaKnown RBP22.66■■□□□ 1.22
AP3S1-207ENST00000514118 CC2D2AQ9P2K1 1620 aa22.58■■□□□ 1.21
AP3S1-207ENST00000514118 CECR2Q9BXF3 1484 aa22.46■■□□□ 1.19
AP3S1-207ENST00000514118 SMARCA4P51532 1647 aa22.16■■□□□ 1.14
AP3S1-207ENST00000514118 BAZ1AQ9NRL2 1556 aaPredicted RBP22.12■■□□□ 1.13
AP3S1-207ENST00000514118 NCAPD3P42695 1498 aa22.09■■□□□ 1.13
AP3S1-207ENST00000514118 ATAD2BQ9ULI0 1458 aa22.08■■□□□ 1.12
AP3S1-207ENST00000514118 SMARCA2P51531 1590 aa22.05■■□□□ 1.12
AP3S1-207ENST00000514118 HMGXB3Q12766 1538 aa21.99■■□□□ 1.11
AP3S1-207ENST00000514118 PEG3Q9GZU2 1588 aa21.98■■□□□ 1.11
AP3S1-207ENST00000514118 MROH2BQ7Z745 1585 aa21.97■■□□□ 1.11
AP3S1-207ENST00000514118 BAZ1BQ9UIG0 1483 aaKnown RBP21.88■■□□□ 1.09
AP3S1-207ENST00000514118 WIZO95785 1651 aa21.7■■□□□ 1.06
AP3S1-207ENST00000514118 RSF1Q96T23 1441 aaPredicted RBP21.68■■□□□ 1.06
AP3S1-207ENST00000514118 NESP48681 1621 aa21.55■■□□□ 1.04
AP3S1-207ENST00000514118 LAMC3Q9Y6N6 1575 aa21.53■■□□□ 1.04
AP3S1-207ENST00000514118 ERCC6Q03468 1493 aa21.52■■□□□ 1.03
AP3S1-207ENST00000514118 TOP2AP11388 1531 aaKnown RBP21.51■■□□□ 1.03
AP3S1-207ENST00000514118 CADPSQ9ULU8 1353 aa21.43■■□□□ 1.02
AP3S1-207ENST00000514118 CUX2O14529 1486 aa21.39■■□□□ 1.01
AP3S1-207ENST00000514118 PDS5BQ9NTI5 1447 aa21.38■■□□□ 1.01
AP3S1-207ENST00000514118 KIF21AQ7Z4S6 1674 aa21.29■■□□□ 1
AP3S1-207ENST00000514118 THOC2Q8NI27 1593 aaKnown RBP21.29■■□□□ 1
AP3S1-207ENST00000514118 CFTRP13569 1480 aa21.29■■□□□ 1
AP3S1-207ENST00000514118 CCDC88BA6NC98 1476 aa21.23■□□□□ 0.99
AP3S1-207ENST00000514118 FANCD2Q9BXW9 1451 aa21.18■□□□□ 0.98
AP3S1-207ENST00000514118 MRC2Q9UBG0 1479 aa21.17■□□□□ 0.98
AP3S1-207ENST00000514118 CEP164Q9UPV0 1460 aa21.16■□□□□ 0.98
AP3S1-207ENST00000514118 WDR62O43379 1518 aa21.11■□□□□ 0.97
AP3S1-207ENST00000514118 PRDM2Q13029 1718 aa21.1■□□□□ 0.97
AP3S1-207ENST00000514118 URB2Q14146 1524 aaKnown RBP20.98■□□□□ 0.95
AP3S1-207ENST00000514118 SUPT5HO00267 1087 aaKnown RBP20.96■□□□□ 0.95
AP3S1-207ENST00000514118 DNAJC5Q9H3Z4 198 aa20.84■□□□□ 0.93
AP3S1-207ENST00000514118 ABCC8Q09428 1581 aa20.84■□□□□ 0.93
AP3S1-207ENST00000514118 TOPBP1Q92547 1522 aa20.83■□□□□ 0.93
AP3S1-207ENST00000514118 DNMBPQ6XZF7 1577 aa20.8■□□□□ 0.92
AP3S1-207ENST00000514118 IFT140Q96RY7 1462 aa20.74■□□□□ 0.91
AP3S1-207ENST00000514118 POLA1P09884 1462 aaPredicted RBP20.64■□□□□ 0.89
AP3S1-207ENST00000514118 ZNF608Q9ULD9 1512 aaPredicted RBP20.63■□□□□ 0.89
AP3S1-207ENST00000514118 CUX1P39880 1505 aa20.63■□□□□ 0.89
AP3S1-207ENST00000514118 TARBP1Q13395 1621 aaKnown RBP20.6■□□□□ 0.89
AP3S1-207ENST00000514118 FGD5Q6ZNL6 1462 aa20.57■□□□□ 0.88
AP3S1-207ENST00000514118 EIF4G3O43432 1585 aaKnown RBP20.55■□□□□ 0.88
AP3S1-207ENST00000514118 SOGA1O94964 1423 aa20.54■□□□□ 0.88
AP3S1-207ENST00000514118 RAD54L2Q9Y4B4 1467 aa20.53■□□□□ 0.88
AP3S1-207ENST00000514118 AQRO60306 1485 aaKnown RBP eCLIP20.49■□□□□ 0.87
AP3S1-207ENST00000514118 WDR97A6NE52 1622 aa20.48■□□□□ 0.87
AP3S1-207ENST00000514118 WRNQ14191 1432 aaPredicted RBP eCLIP20.44■□□□□ 0.86
AP3S1-207ENST00000514118 OSCARQ8IYS5 282 aa20.43■□□□□ 0.86
AP3S1-207ENST00000514118 TDRD9Q8NDG6 1382 aaKnown RBP20.43■□□□□ 0.86
AP3S1-207ENST00000514118 TOP2BQ02880 1626 aa20.42■□□□□ 0.86
AP3S1-207ENST00000514118 BIVM-ERCC5R4GMW8 1640 aa20.42■□□□□ 0.86
AP3S1-207ENST00000514118 SYNJ1O43426 1573 aa20.39■□□□□ 0.85
AP3S1-207ENST00000514118 ABCA10Q8WWZ4 1543 aa20.39■□□□□ 0.85
AP3S1-207ENST00000514118 GRIN2BQ13224 1484 aa20.34■□□□□ 0.85
AP3S1-207ENST00000514118 GAPVD1Q14C86 1478 aa20.31■□□□□ 0.84
AP3S1-207ENST00000514118 SNAPC4Q5SXM2 1469 aa20.31■□□□□ 0.84
AP3S1-207ENST00000514118 MAGI1Q96QZ7 1491 aaPredicted RBP20.31■□□□□ 0.84
AP3S1-207ENST00000514118 ABCA5Q8WWZ7 1642 aa20.31■□□□□ 0.84
AP3S1-207ENST00000514118 CHD1O14646 1710 aa20.3■□□□□ 0.84
AP3S1-207ENST00000514118 PBRM1Q86U86 1689 aa20.26■□□□□ 0.83
AP3S1-207ENST00000514118 FBLN2P98095 1184 aa20.22■□□□□ 0.83
AP3S1-207ENST00000514118 SYNJ2O15056 1496 aa20.22■□□□□ 0.83
AP3S1-207ENST00000514118 CHMP7Q8WUX9 453 aaPredicted RBP20.18■□□□□ 0.82
AP3S1-207ENST00000514118 ERICH3Q5RHP9 1530 aa20.14■□□□□ 0.81
AP3S1-207ENST00000514118 RIMBP3CA6NJZ7 1639 aa20.13■□□□□ 0.81
AP3S1-207ENST00000514118 RIMBP3BA6NNM3 1639 aa20.13■□□□□ 0.81
AP3S1-207ENST00000514118 RIMBP3Q9UFD9 1639 aa20.13■□□□□ 0.81
AP3S1-207ENST00000514118 ADAMTS12P58397 1594 aa20.12■□□□□ 0.81
AP3S1-207ENST00000514118 ARHGEF11O15085 1522 aa20.12■□□□□ 0.81
AP3S1-207ENST00000514118 CLASP1Q7Z460 1538 aa20.12■□□□□ 0.81
AP3S1-207ENST00000514118 FHAD1B1AJZ9 1412 aa20.09■□□□□ 0.81
AP3S1-207ENST00000514118 GRIN2AQ12879 1464 aa20.07■□□□□ 0.8
AP3S1-207ENST00000514118 TRIM41Q8WV44 630 aa20.04■□□□□ 0.8
AP3S1-207ENST00000514118 KIF27Q86VH2 1401 aa20.02■□□□□ 0.8
AP3S1-207ENST00000514118 NUP160Q12769 1436 aa20.02■□□□□ 0.79
AP3S1-207ENST00000514118 CEP170Q5SW79 1584 aa19.97■□□□□ 0.79
AP3S1-207ENST00000514118 ARAP1Q96P48 1450 aa19.96■□□□□ 0.79
AP3S1-207ENST00000514118 IGF1RP08069 1367 aa19.95■□□□□ 0.79
AP3S1-207ENST00000514118 CUL7Q14999 1698 aa19.92■□□□□ 0.78
AP3S1-207ENST00000514118 CYB5RLQ6IPT4 315 aa19.89■□□□□ 0.77
AP3S1-207ENST00000514118 SHROOM2Q13796 1616 aa19.87■□□□□ 0.77
AP3S1-207ENST00000514118 CARMIL1Q5VZK9 1371 aa19.83■□□□□ 0.77
AP3S1-207ENST00000514118 RUSC2Q8N2Y8 1516 aa19.82■□□□□ 0.76
AP3S1-207ENST00000514118 ERCC6L2Q5T890 1561 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 837.6 ms