RNA–Protein interactions for RNA: ENST00000513978.5

GRAMD2B-214, Transcript of GRAM domain containing 2B, humanhuman

TSL 2

Gene GRAMD2B, Length 1,847 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-214ENST00000513978 NISCHQ9Y2I1 1504 aa37.94■■■■□ 3.66
GRAMD2B-214ENST00000513978 CCDC180Q9P1Z9 1646 aa33.07■■■□□ 2.88
GRAMD2B-214ENST00000513978 ZCCHC6Q5VYS8 1495 aaKnown RBP31.91■■■□□ 2.7
GRAMD2B-214ENST00000513978 DCAF1Q9Y4B6 1507 aa31.44■■■□□ 2.62
GRAMD2B-214ENST00000513978 DCAF8L2P0C7V8 631 aa31.2■■■□□ 2.59
GRAMD2B-214ENST00000513978 ABCC9O60706 1549 aa31.03■■■□□ 2.56
GRAMD2B-214ENST00000513978 MYO15BQ96JP2 1530 aa31.03■■■□□ 2.56
GRAMD2B-214ENST00000513978 SHROOM4Q9ULL8 1493 aa30.94■■■□□ 2.54
GRAMD2B-214ENST00000513978 NACADO15069 1562 aa30.77■■■□□ 2.52
GRAMD2B-214ENST00000513978 RB1CC1Q8TDY2 1594 aa30.46■■■□□ 2.47
GRAMD2B-214ENST00000513978 SCRIBQ14160 1630 aa30.34■■■□□ 2.45
GRAMD2B-214ENST00000513978 SUPT5HO00267 1087 aaKnown RBP29.87■■■□□ 2.37
GRAMD2B-214ENST00000513978 UNC13AQ9UPW8 1703 aa29.76■■■□□ 2.35
GRAMD2B-214ENST00000513978 RSF1Q96T23 1441 aaPredicted RBP29.47■■■□□ 2.31
GRAMD2B-214ENST00000513978 BICRAQ9NZM4 1560 aa29.47■■■□□ 2.31
GRAMD2B-214ENST00000513978 CECR2Q9BXF3 1484 aa29.4■■■□□ 2.3
GRAMD2B-214ENST00000513978 BAZ1AQ9NRL2 1556 aaPredicted RBP29.32■■■□□ 2.28
GRAMD2B-214ENST00000513978 MROH2BQ7Z745 1585 aa29.28■■■□□ 2.28
GRAMD2B-214ENST00000513978 PABPN1Q86U42 306 aaKnown RBP eCLIP29.26■■■□□ 2.27
GRAMD2B-214ENST00000513978 SMARCA4P51532 1647 aa29.13■■■□□ 2.25
GRAMD2B-214ENST00000513978 WIZO95785 1651 aa29.03■■■□□ 2.24
GRAMD2B-214ENST00000513978 TOP2AP11388 1531 aaKnown RBP28.81■■■□□ 2.2
GRAMD2B-214ENST00000513978 PEG3Q9GZU2 1588 aa28.8■■■□□ 2.2
GRAMD2B-214ENST00000513978 CHIC1Q5VXU3 224 aa28.7■■■□□ 2.18
GRAMD2B-214ENST00000513978 SMARCA2P51531 1590 aa28.65■■■□□ 2.18
GRAMD2B-214ENST00000513978 ATAD2BQ9ULI0 1458 aa28.62■■■□□ 2.17
GRAMD2B-214ENST00000513978 EIF4G1Q04637 1599 aaKnown RBP28.59■■■□□ 2.17
GRAMD2B-214ENST00000513978 BAZ1BQ9UIG0 1483 aaKnown RBP28.48■■■□□ 2.15
GRAMD2B-214ENST00000513978 CCDC88BA6NC98 1476 aa28.47■■■□□ 2.15
GRAMD2B-214ENST00000513978 NCAPD3P42695 1498 aa28.37■■■□□ 2.13
GRAMD2B-214ENST00000513978 HMGXB3Q12766 1538 aa28.36■■■□□ 2.13
GRAMD2B-214ENST00000513978 TRIM41Q8WV44 630 aa28.13■■■□□ 2.09
GRAMD2B-214ENST00000513978 CC2D2AQ9P2K1 1620 aa28.11■■■□□ 2.09
GRAMD2B-214ENST00000513978 ABCC8Q09428 1581 aa27.88■■■□□ 2.05
GRAMD2B-214ENST00000513978 CFTRP13569 1480 aa27.77■■■□□ 2.04
GRAMD2B-214ENST00000513978 WRNQ14191 1432 aaPredicted RBP eCLIP27.75■■■□□ 2.03
GRAMD2B-214ENST00000513978 PRDM2Q13029 1718 aa27.65■■■□□ 2.02
GRAMD2B-214ENST00000513978 CADPSQ9ULU8 1353 aa27.64■■■□□ 2.02
GRAMD2B-214ENST00000513978 SYNJ1O43426 1573 aa27.6■■■□□ 2.01
GRAMD2B-214ENST00000513978 LOC105371045A0A1W2PR82 267 aa27.54■■■□□ 2
GRAMD2B-214ENST00000513978 FAM9AQ8IZU1 332 aaPredicted RBP27.54■■■□□ 2
GRAMD2B-214ENST00000513978 TOP2BQ02880 1626 aa27.52■■■□□ 2
GRAMD2B-214ENST00000513978 EEA1Q15075 1411 aa27.52■■■□□ 2
GRAMD2B-214ENST00000513978 BIVM-ERCC5R4GMW8 1640 aa27.5■■□□□ 1.99
GRAMD2B-214ENST00000513978 SOGA1O94964 1423 aa27.4■■□□□ 1.98
GRAMD2B-214ENST00000513978 LAMC3Q9Y6N6 1575 aa27.4■■□□□ 1.98
GRAMD2B-214ENST00000513978 CUX1P39880 1505 aa27.38■■□□□ 1.97
GRAMD2B-214ENST00000513978 FANCD2Q9BXW9 1451 aa27.33■■□□□ 1.97
GRAMD2B-214ENST00000513978 NESP48681 1621 aa27.27■■□□□ 1.96
GRAMD2B-214ENST00000513978 CSRNP3Q8WYN3 585 aa27.26■■□□□ 1.95
GRAMD2B-214ENST00000513978 RUSC2Q8N2Y8 1516 aa27.25■■□□□ 1.95
GRAMD2B-214ENST00000513978 DNAJC5BQ9UF47 199 aa27.22■■□□□ 1.95
GRAMD2B-214ENST00000513978 PDS5BQ9NTI5 1447 aa27.19■■□□□ 1.94
GRAMD2B-214ENST00000513978 CEP164Q9UPV0 1460 aa27.16■■□□□ 1.94
GRAMD2B-214ENST00000513978 DNMBPQ6XZF7 1577 aa27.14■■□□□ 1.93
GRAMD2B-214ENST00000513978 KIF21BO75037 1637 aa27.1■■□□□ 1.93
GRAMD2B-214ENST00000513978 GOLGA3Q08378 1498 aa27.09■■□□□ 1.93
GRAMD2B-214ENST00000513978 EHMT2Q96KQ7 1210 aa27.09■■□□□ 1.93
GRAMD2B-214ENST00000513978 FGD5Q6ZNL6 1462 aa27.07■■□□□ 1.92
GRAMD2B-214ENST00000513978 KIF27Q86VH2 1401 aa27.07■■□□□ 1.92
GRAMD2B-214ENST00000513978 TOPBP1Q92547 1522 aa27.05■■□□□ 1.92
GRAMD2B-214ENST00000513978 TNIKQ9UKE5 1360 aa27.03■■□□□ 1.92
GRAMD2B-214ENST00000513978 KIF21AQ7Z4S6 1674 aa26.97■■□□□ 1.91
GRAMD2B-214ENST00000513978 URB2Q14146 1524 aaKnown RBP26.96■■□□□ 1.91
GRAMD2B-214ENST00000513978 CUX2O14529 1486 aa26.93■■□□□ 1.9
GRAMD2B-214ENST00000513978 POLA1P09884 1462 aaPredicted RBP26.92■■□□□ 1.9
GRAMD2B-214ENST00000513978 UBTFP17480 764 aaKnown RBP26.9■■□□□ 1.9
GRAMD2B-214ENST00000513978 ERICH3Q5RHP9 1530 aa26.9■■□□□ 1.9
GRAMD2B-214ENST00000513978 PRXQ9BXM0 1461 aa26.9■■□□□ 1.9
GRAMD2B-214ENST00000513978 ABCA10Q8WWZ4 1543 aa26.87■■□□□ 1.89
GRAMD2B-214ENST00000513978 CEP162Q5TB80 1403 aa26.86■■□□□ 1.89
GRAMD2B-214ENST00000513978 RAPGEF2Q9Y4G8 1499 aa26.85■■□□□ 1.89
GRAMD2B-214ENST00000513978 MRC2Q9UBG0 1479 aa26.81■■□□□ 1.88
GRAMD2B-214ENST00000513978 RAD54L2Q9Y4B4 1467 aa26.79■■□□□ 1.88
GRAMD2B-214ENST00000513978 IGF1RP08069 1367 aa26.77■■□□□ 1.88
GRAMD2B-214ENST00000513978 WDR97A6NE52 1622 aa26.74■■□□□ 1.87
GRAMD2B-214ENST00000513978 WDR62O43379 1518 aa26.66■■□□□ 1.86
GRAMD2B-214ENST00000513978 CARMIL1Q5VZK9 1371 aa26.65■■□□□ 1.86
GRAMD2B-214ENST00000513978 ERCC6Q03468 1493 aa26.65■■□□□ 1.86
GRAMD2B-214ENST00000513978 CLIP1P30622 1438 aa26.64■■□□□ 1.85
GRAMD2B-214ENST00000513978 TARBP1Q13395 1621 aaKnown RBP26.62■■□□□ 1.85
GRAMD2B-214ENST00000513978 ABCA5Q8WWZ7 1642 aa26.62■■□□□ 1.85
GRAMD2B-214ENST00000513978 CUL7Q14999 1698 aa26.61■■□□□ 1.85
GRAMD2B-214ENST00000513978 GAPVD1Q14C86 1478 aa26.56■■□□□ 1.84
GRAMD2B-214ENST00000513978 IFT140Q96RY7 1462 aa26.52■■□□□ 1.84
GRAMD2B-214ENST00000513978 TDRD9Q8NDG6 1382 aaKnown RBP26.52■■□□□ 1.84
GRAMD2B-214ENST00000513978 THOC2Q8NI27 1593 aaKnown RBP26.52■■□□□ 1.84
GRAMD2B-214ENST00000513978 TRIM26Q12899 539 aaPredicted RBP26.51■■□□□ 1.83
GRAMD2B-214ENST00000513978 PCGF6Q9BYE7 350 aa26.46■■□□□ 1.83
GRAMD2B-214ENST00000513978 VPS8Q8N3P4 1428 aa26.44■■□□□ 1.82
GRAMD2B-214ENST00000513978 PBRM1Q86U86 1689 aa26.39■■□□□ 1.81
GRAMD2B-214ENST00000513978 GRIN2BQ13224 1484 aa26.35■■□□□ 1.81
GRAMD2B-214ENST00000513978 RANGAP1P46060 587 aaPredicted RBP26.34■■□□□ 1.81
GRAMD2B-214ENST00000513978 AQRO60306 1485 aaKnown RBP eCLIP26.33■■□□□ 1.81
GRAMD2B-214ENST00000513978 ARAP1Q96P48 1450 aa26.33■■□□□ 1.81
GRAMD2B-214ENST00000513978 ARHGAP35Q9NRY4 1499 aa26.3■■□□□ 1.8
GRAMD2B-214ENST00000513978 FHAD1B1AJZ9 1412 aa26.3■■□□□ 1.8
GRAMD2B-214ENST00000513978 CTTNBP2Q8WZ74 1663 aa26.3■■□□□ 1.8
GRAMD2B-214ENST00000513978 ZNF608Q9ULD9 1512 aaPredicted RBP26.28■■□□□ 1.8
GRAMD2B-214ENST00000513978 ADAMTS12P58397 1594 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms