RNA–Protein interactions for RNA: ENST00000513941.5

SPDL1-213, Transcript of spindle apparatus coiled-coil protein 1, humanhuman

TSL 5

Gene SPDL1, Length 896 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1-213ENST00000513941 NISCHQ9Y2I1 1504 aa29.63■■■□□ 2.33
SPDL1-213ENST00000513941 AEBP2Q6ZN18 517 aaPredicted RBP28.94■■■□□ 2.22
SPDL1-213ENST00000513941 ABCC9O60706 1549 aa27.97■■■□□ 2.07
SPDL1-213ENST00000513941 CHIC1Q5VXU3 224 aa27.26■■□□□ 1.95
SPDL1-213ENST00000513941 DNAJC5BQ9UF47 199 aa27.25■■□□□ 1.95
SPDL1-213ENST00000513941 CCDC180Q9P1Z9 1646 aa26.92■■□□□ 1.9
SPDL1-213ENST00000513941 RB1CC1Q8TDY2 1594 aa26.12■■□□□ 1.77
SPDL1-213ENST00000513941 PABPN1Q86U42 306 aaKnown RBP eCLIP25.92■■□□□ 1.74
SPDL1-213ENST00000513941 NACADO15069 1562 aa25.71■■□□□ 1.71
SPDL1-213ENST00000513941 DNAJC5Q9H3Z4 198 aa25.65■■□□□ 1.7
SPDL1-213ENST00000513941 UNC13AQ9UPW8 1703 aa25.55■■□□□ 1.68
SPDL1-213ENST00000513941 BICRAQ9NZM4 1560 aa25.52■■□□□ 1.68
SPDL1-213ENST00000513941 DCAF8L2P0C7V8 631 aa25.37■■□□□ 1.65
SPDL1-213ENST00000513941 CECR2Q9BXF3 1484 aa25.28■■□□□ 1.64
SPDL1-213ENST00000513941 CC2D2AQ9P2K1 1620 aa25.19■■□□□ 1.62
SPDL1-213ENST00000513941 MYO15BQ96JP2 1530 aa25.05■■□□□ 1.6
SPDL1-213ENST00000513941 SHROOM4Q9ULL8 1493 aa24.94■■□□□ 1.58
SPDL1-213ENST00000513941 EIF4G1Q04637 1599 aaKnown RBP24.91■■□□□ 1.58
SPDL1-213ENST00000513941 SENP3Q9H4L4 574 aaPredicted RBP24.63■■□□□ 1.53
SPDL1-213ENST00000513941 SCRIBQ14160 1630 aa24.53■■□□□ 1.52
SPDL1-213ENST00000513941 CUX2O14529 1486 aa24.46■■□□□ 1.51
SPDL1-213ENST00000513941 DCAF1Q9Y4B6 1507 aa24.38■■□□□ 1.49
SPDL1-213ENST00000513941 ZCCHC6Q5VYS8 1495 aaKnown RBP24.34■■□□□ 1.49
SPDL1-213ENST00000513941 PHF23Q9BUL5 403 aaPredicted RBP24.3■■□□□ 1.48
SPDL1-213ENST00000513941 ERCC6Q03468 1493 aa24.14■■□□□ 1.46
SPDL1-213ENST00000513941 TRIM41Q8WV44 630 aa24.07■■□□□ 1.44
SPDL1-213ENST00000513941 NCAPD3P42695 1498 aa23.81■■□□□ 1.4
SPDL1-213ENST00000513941 NESP48681 1621 aa23.79■■□□□ 1.4
SPDL1-213ENST00000513941 THOC2Q8NI27 1593 aaKnown RBP23.7■■□□□ 1.38
SPDL1-213ENST00000513941 ATAD2BQ9ULI0 1458 aa23.61■■□□□ 1.37
SPDL1-213ENST00000513941 HMGXB3Q12766 1538 aa23.49■■□□□ 1.35
SPDL1-213ENST00000513941 SMARCA2P51531 1590 aa23.47■■□□□ 1.35
SPDL1-213ENST00000513941 KIF21AQ7Z4S6 1674 aa23.37■■□□□ 1.33
SPDL1-213ENST00000513941 LAMC3Q9Y6N6 1575 aa23.36■■□□□ 1.33
SPDL1-213ENST00000513941 SMARCA4P51532 1647 aa23.3■■□□□ 1.32
SPDL1-213ENST00000513941 PDS5BQ9NTI5 1447 aa23.26■■□□□ 1.31
SPDL1-213ENST00000513941 BAZ1BQ9UIG0 1483 aaKnown RBP23.26■■□□□ 1.31
SPDL1-213ENST00000513941 BAZ1AQ9NRL2 1556 aaPredicted RBP23.24■■□□□ 1.31
SPDL1-213ENST00000513941 OSCARQ8IYS5 282 aa23.18■■□□□ 1.3
SPDL1-213ENST00000513941 MRC2Q9UBG0 1479 aa23.15■■□□□ 1.3
SPDL1-213ENST00000513941 WDR62O43379 1518 aa23.13■■□□□ 1.29
SPDL1-213ENST00000513941 PEG3Q9GZU2 1588 aa23.09■■□□□ 1.29
SPDL1-213ENST00000513941 CADPSQ9ULU8 1353 aa23.02■■□□□ 1.28
SPDL1-213ENST00000513941 RIMBP3CA6NJZ7 1639 aa23.02■■□□□ 1.28
SPDL1-213ENST00000513941 RIMBP3BA6NNM3 1639 aa23.02■■□□□ 1.28
SPDL1-213ENST00000513941 RIMBP3Q9UFD9 1639 aa23.02■■□□□ 1.28
SPDL1-213ENST00000513941 FOXD1Q16676 465 aa23.02■■□□□ 1.28
SPDL1-213ENST00000513941 ARHGEF11O15085 1522 aa22.85■■□□□ 1.25
SPDL1-213ENST00000513941 MROH2BQ7Z745 1585 aa22.84■■□□□ 1.25
SPDL1-213ENST00000513941 CEP164Q9UPV0 1460 aa22.84■■□□□ 1.25
SPDL1-213ENST00000513941 FANCD2Q9BXW9 1451 aa22.76■■□□□ 1.23
SPDL1-213ENST00000513941 TRHP20396 242 aaPredicted RBP22.75■■□□□ 1.23
SPDL1-213ENST00000513941 CYB5RLQ6IPT4 315 aa22.74■■□□□ 1.23
SPDL1-213ENST00000513941 URB2Q14146 1524 aaKnown RBP22.68■■□□□ 1.22
SPDL1-213ENST00000513941 ARAP1Q96P48 1450 aa22.6■■□□□ 1.21
SPDL1-213ENST00000513941 ZNF608Q9ULD9 1512 aaPredicted RBP22.57■■□□□ 1.2
SPDL1-213ENST00000513941 CFTRP13569 1480 aa22.57■■□□□ 1.2
SPDL1-213ENST00000513941 WIZO95785 1651 aa22.49■■□□□ 1.19
SPDL1-213ENST00000513941 IFT140Q96RY7 1462 aa22.42■■□□□ 1.18
SPDL1-213ENST00000513941 RSF1Q96T23 1441 aaPredicted RBP22.35■■□□□ 1.17
SPDL1-213ENST00000513941 EIF4G3O43432 1585 aaKnown RBP22.33■■□□□ 1.16
SPDL1-213ENST00000513941 CHD1O14646 1710 aa22.32■■□□□ 1.16
SPDL1-213ENST00000513941 AQRO60306 1485 aaKnown RBP eCLIP22.22■■□□□ 1.15
SPDL1-213ENST00000513941 TOPBP1Q92547 1522 aa22.22■■□□□ 1.15
SPDL1-213ENST00000513941 FBLN2P98095 1184 aa22.2■■□□□ 1.14
SPDL1-213ENST00000513941 PRDM2Q13029 1718 aa22.13■■□□□ 1.13
SPDL1-213ENST00000513941 TARBP1Q13395 1621 aaKnown RBP22.13■■□□□ 1.13
SPDL1-213ENST00000513941 CLASP1Q7Z460 1538 aa22.11■■□□□ 1.13
SPDL1-213ENST00000513941 TOP2AP11388 1531 aaKnown RBP22.11■■□□□ 1.13
SPDL1-213ENST00000513941 ILDR1Q86SU0 546 aaPredicted RBP22.07■■□□□ 1.12
SPDL1-213ENST00000513941 ABCC8Q09428 1581 aa22.03■■□□□ 1.12
SPDL1-213ENST00000513941 DNMBPQ6XZF7 1577 aa22.02■■□□□ 1.12
SPDL1-213ENST00000513941 POLA1P09884 1462 aaPredicted RBP21.95■■□□□ 1.1
SPDL1-213ENST00000513941 SNAPC4Q5SXM2 1469 aa21.94■■□□□ 1.1
SPDL1-213ENST00000513941 GAPVD1Q14C86 1478 aa21.93■■□□□ 1.1
SPDL1-213ENST00000513941 TDRD9Q8NDG6 1382 aaKnown RBP21.93■■□□□ 1.1
SPDL1-213ENST00000513941 CCDC88BA6NC98 1476 aa21.92■■□□□ 1.1
SPDL1-213ENST00000513941 SYNJ1O43426 1573 aa21.91■■□□□ 1.1
SPDL1-213ENST00000513941 RAD54L2Q9Y4B4 1467 aa21.91■■□□□ 1.1
SPDL1-213ENST00000513941 CHMP7Q8WUX9 453 aaPredicted RBP21.87■■□□□ 1.09
SPDL1-213ENST00000513941 SOGA1O94964 1423 aa21.8■■□□□ 1.08
SPDL1-213ENST00000513941 MAGI1Q96QZ7 1491 aaPredicted RBP21.8■■□□□ 1.08
SPDL1-213ENST00000513941 KDM4FA0A1W2PPD8 638 aa21.76■■□□□ 1.07
SPDL1-213ENST00000513941 SYNJ2O15056 1496 aa21.76■■□□□ 1.07
SPDL1-213ENST00000513941 ERCC6L2Q5T890 1561 aa21.74■■□□□ 1.07
SPDL1-213ENST00000513941 WDR97A6NE52 1622 aa21.72■■□□□ 1.07
SPDL1-213ENST00000513941 GRIN2BQ13224 1484 aa21.71■■□□□ 1.07
SPDL1-213ENST00000513941 KIF13AQ9H1H9 1805 aa21.69■■□□□ 1.06
SPDL1-213ENST00000513941 FGD5Q6ZNL6 1462 aa21.65■■□□□ 1.06
SPDL1-213ENST00000513941 PLPPR3Q6T4P5 718 aa21.65■■□□□ 1.06
SPDL1-213ENST00000513941 MSH5O43196 834 aa21.57■■□□□ 1.04
SPDL1-213ENST00000513941 CEP170Q5SW79 1584 aa21.54■■□□□ 1.04
SPDL1-213ENST00000513941 PBRM1Q86U86 1689 aa21.52■■□□□ 1.04
SPDL1-213ENST00000513941 CUX1P39880 1505 aa21.51■■□□□ 1.03
SPDL1-213ENST00000513941 FAM69CQ0P6D2 419 aa21.47■■□□□ 1.03
SPDL1-213ENST00000513941 ABCC10Q5T3U5 1492 aa21.46■■□□□ 1.03
SPDL1-213ENST00000513941 PIAS4Q8N2W9 510 aaPredicted RBP21.45■■□□□ 1.02
SPDL1-213ENST00000513941 GRIN2AQ12879 1464 aa21.45■■□□□ 1.02
SPDL1-213ENST00000513941 NUP160Q12769 1436 aa21.44■■□□□ 1.02
SPDL1-213ENST00000513941 SHROOM2Q13796 1616 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms