RNA–Protein interactions for RNA: ENST00000513904.1

CUL9-216, Transcript of cullin 9, humanhuman

TSL 4

Gene CUL9, Length 938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL9-216ENST00000513904 NISCHQ9Y2I1 1504 aa45.31■■■■■ 4.84
CUL9-216ENST00000513904 CCDC180Q9P1Z9 1646 aa40.38■■■■■ 4.06
CUL9-216ENST00000513904 ABCC9O60706 1549 aa39.85■■■■□ 3.97
CUL9-216ENST00000513904 RB1CC1Q8TDY2 1594 aa38.19■■■■□ 3.7
CUL9-216ENST00000513904 NACADO15069 1562 aa38.08■■■■□ 3.69
CUL9-216ENST00000513904 DCAF8L2P0C7V8 631 aa38.03■■■■□ 3.68
CUL9-216ENST00000513904 MYO15BQ96JP2 1530 aa37.76■■■■□ 3.63
CUL9-216ENST00000513904 ZCCHC6Q5VYS8 1495 aaKnown RBP37.68■■■■□ 3.62
CUL9-216ENST00000513904 DCAF1Q9Y4B6 1507 aa37.47■■■■□ 3.59
CUL9-216ENST00000513904 UNC13AQ9UPW8 1703 aa37.28■■■■□ 3.56
CUL9-216ENST00000513904 PABPN1Q86U42 306 aaKnown RBP eCLIP37.21■■■■□ 3.55
CUL9-216ENST00000513904 BICRAQ9NZM4 1560 aa37.04■■■■□ 3.52
CUL9-216ENST00000513904 DNAJC5BQ9UF47 199 aa36.88■■■■□ 3.49
CUL9-216ENST00000513904 SCRIBQ14160 1630 aa36.85■■■■□ 3.49
CUL9-216ENST00000513904 SHROOM4Q9ULL8 1493 aa36.63■■■■□ 3.45
CUL9-216ENST00000513904 EIF4G1Q04637 1599 aaKnown RBP36.1■■■■□ 3.37
CUL9-216ENST00000513904 CC2D2AQ9P2K1 1620 aa36.02■■■■□ 3.36
CUL9-216ENST00000513904 CECR2Q9BXF3 1484 aa35.86■■■■□ 3.33
CUL9-216ENST00000513904 SMARCA4P51532 1647 aa35.21■■■■□ 3.23
CUL9-216ENST00000513904 NCAPD3P42695 1498 aa35.16■■■■□ 3.22
CUL9-216ENST00000513904 BAZ1AQ9NRL2 1556 aaPredicted RBP35.13■■■■□ 3.21
CUL9-216ENST00000513904 ATAD2BQ9ULI0 1458 aa35.12■■■■□ 3.21
CUL9-216ENST00000513904 SMARCA2P51531 1590 aa35.06■■■■□ 3.2
CUL9-216ENST00000513904 HMGXB3Q12766 1538 aa34.94■■■■□ 3.18
CUL9-216ENST00000513904 MROH2BQ7Z745 1585 aa34.91■■■■□ 3.18
CUL9-216ENST00000513904 PEG3Q9GZU2 1588 aa34.87■■■■□ 3.17
CUL9-216ENST00000513904 BAZ1BQ9UIG0 1483 aaKnown RBP34.81■■■■□ 3.16
CUL9-216ENST00000513904 WIZO95785 1651 aa34.5■■■■□ 3.11
CUL9-216ENST00000513904 RSF1Q96T23 1441 aaPredicted RBP34.42■■■■□ 3.1
CUL9-216ENST00000513904 NESP48681 1621 aa34.4■■■■□ 3.1
CUL9-216ENST00000513904 ERCC6Q03468 1493 aa34.39■■■■□ 3.1
CUL9-216ENST00000513904 LAMC3Q9Y6N6 1575 aa34.25■■■■□ 3.07
CUL9-216ENST00000513904 CUX2O14529 1486 aa34.14■■■■□ 3.06
CUL9-216ENST00000513904 TOP2AP11388 1531 aaKnown RBP34.13■■■■□ 3.05
CUL9-216ENST00000513904 CADPSQ9ULU8 1353 aa34.12■■■■□ 3.05
CUL9-216ENST00000513904 PDS5BQ9NTI5 1447 aa34.06■■■■□ 3.04
CUL9-216ENST00000513904 KIF21AQ7Z4S6 1674 aa33.95■■■■□ 3.03
CUL9-216ENST00000513904 THOC2Q8NI27 1593 aaKnown RBP33.92■■■■□ 3.02
CUL9-216ENST00000513904 CFTRP13569 1480 aa33.85■■■■□ 3.01
CUL9-216ENST00000513904 CCDC88BA6NC98 1476 aa33.75■■■□□ 2.99
CUL9-216ENST00000513904 MRC2Q9UBG0 1479 aa33.72■■■□□ 2.99
CUL9-216ENST00000513904 FANCD2Q9BXW9 1451 aa33.71■■■□□ 2.99
CUL9-216ENST00000513904 CEP164Q9UPV0 1460 aa33.7■■■□□ 2.99
CUL9-216ENST00000513904 WDR62O43379 1518 aa33.61■■■□□ 2.97
CUL9-216ENST00000513904 PRDM2Q13029 1718 aa33.5■■■□□ 2.95
CUL9-216ENST00000513904 DNAJC5Q9H3Z4 198 aa33.47■■■□□ 2.95
CUL9-216ENST00000513904 URB2Q14146 1524 aaKnown RBP33.39■■■□□ 2.94
CUL9-216ENST00000513904 SUPT5HO00267 1087 aaKnown RBP33.34■■■□□ 2.93
CUL9-216ENST00000513904 TOPBP1Q92547 1522 aa33.14■■■□□ 2.9
CUL9-216ENST00000513904 ABCC8Q09428 1581 aa33.13■■■□□ 2.89
CUL9-216ENST00000513904 DNMBPQ6XZF7 1577 aa33.07■■■□□ 2.88
CUL9-216ENST00000513904 IFT140Q96RY7 1462 aa33.02■■■□□ 2.88
CUL9-216ENST00000513904 ZNF608Q9ULD9 1512 aaPredicted RBP32.88■■■□□ 2.85
CUL9-216ENST00000513904 POLA1P09884 1462 aaPredicted RBP32.84■■■□□ 2.85
CUL9-216ENST00000513904 TARBP1Q13395 1621 aaKnown RBP32.78■■■□□ 2.84
CUL9-216ENST00000513904 CUX1P39880 1505 aa32.77■■■□□ 2.84
CUL9-216ENST00000513904 EIF4G3O43432 1585 aaKnown RBP32.72■■■□□ 2.83
CUL9-216ENST00000513904 SOGA1O94964 1423 aa32.71■■■□□ 2.83
CUL9-216ENST00000513904 FGD5Q6ZNL6 1462 aa32.71■■■□□ 2.83
CUL9-216ENST00000513904 RAD54L2Q9Y4B4 1467 aa32.71■■■□□ 2.83
CUL9-216ENST00000513904 OSCARQ8IYS5 282 aa32.7■■■□□ 2.83
CUL9-216ENST00000513904 AQRO60306 1485 aaKnown RBP eCLIP32.67■■■□□ 2.824e-6■■■■■ 31
CUL9-216ENST00000513904 TDRD9Q8NDG6 1382 aaKnown RBP32.57■■■□□ 2.8
CUL9-216ENST00000513904 WDR97A6NE52 1622 aa32.51■■■□□ 2.8
CUL9-216ENST00000513904 WRNQ14191 1432 aaPredicted RBP eCLIP32.46■■■□□ 2.79
CUL9-216ENST00000513904 TOP2BQ02880 1626 aa32.4■■■□□ 2.78
CUL9-216ENST00000513904 ABCA10Q8WWZ4 1543 aa32.39■■■□□ 2.78
CUL9-216ENST00000513904 BIVM-ERCC5R4GMW8 1640 aa32.39■■■□□ 2.78
CUL9-216ENST00000513904 FBLN2P98095 1184 aa32.37■■■□□ 2.77
CUL9-216ENST00000513904 SYNJ1O43426 1573 aa32.36■■■□□ 2.77
CUL9-216ENST00000513904 GRIN2BQ13224 1484 aa32.36■■■□□ 2.77
CUL9-216ENST00000513904 CHD1O14646 1710 aa32.36■■■□□ 2.77
CUL9-216ENST00000513904 SNAPC4Q5SXM2 1469 aa32.35■■■□□ 2.77
CUL9-216ENST00000513904 GAPVD1Q14C86 1478 aa32.33■■■□□ 2.77
CUL9-216ENST00000513904 MAGI1Q96QZ7 1491 aaPredicted RBP32.3■■■□□ 2.76
CUL9-216ENST00000513904 ABCA5Q8WWZ7 1642 aa32.26■■■□□ 2.75
CUL9-216ENST00000513904 TRIM41Q8WV44 630 aa32.24■■■□□ 2.75
CUL9-216ENST00000513904 PBRM1Q86U86 1689 aa32.24■■■□□ 2.75
CUL9-216ENST00000513904 CHMP7Q8WUX9 453 aaPredicted RBP32.23■■■□□ 2.75
CUL9-216ENST00000513904 SYNJ2O15056 1496 aa32.19■■■□□ 2.74
CUL9-216ENST00000513904 RIMBP3CA6NJZ7 1639 aa32.15■■■□□ 2.74
CUL9-216ENST00000513904 RIMBP3BA6NNM3 1639 aa32.15■■■□□ 2.74
CUL9-216ENST00000513904 RIMBP3Q9UFD9 1639 aa32.15■■■□□ 2.74
CUL9-216ENST00000513904 ARHGEF11O15085 1522 aa32.13■■■□□ 2.73
CUL9-216ENST00000513904 CLASP1Q7Z460 1538 aa32.02■■■□□ 2.72
CUL9-216ENST00000513904 ERICH3Q5RHP9 1530 aa31.99■■■□□ 2.71
CUL9-216ENST00000513904 ADAMTS12P58397 1594 aa31.98■■■□□ 2.71
CUL9-216ENST00000513904 FHAD1B1AJZ9 1412 aa31.94■■■□□ 2.7
CUL9-216ENST00000513904 GRIN2AQ12879 1464 aa31.94■■■□□ 2.7
CUL9-216ENST00000513904 CYB5RLQ6IPT4 315 aa31.89■■■□□ 2.7
CUL9-216ENST00000513904 ARAP1Q96P48 1450 aa31.85■■■□□ 2.69
CUL9-216ENST00000513904 NUP160Q12769 1436 aa31.82■■■□□ 2.68
CUL9-216ENST00000513904 KIF27Q86VH2 1401 aa31.82■■■□□ 2.68
CUL9-216ENST00000513904 CEP170Q5SW79 1584 aa31.78■■■□□ 2.68
CUL9-216ENST00000513904 IGF1RP08069 1367 aa31.73■■■□□ 2.67
CUL9-216ENST00000513904 CUL7Q14999 1698 aa31.62■■■□□ 2.65
CUL9-216ENST00000513904 SHROOM2Q13796 1616 aa31.58■■■□□ 2.65
CUL9-216ENST00000513904 ERCC6L2Q5T890 1561 aa31.56■■■□□ 2.64
CUL9-216ENST00000513904 CARMIL1Q5VZK9 1371 aa31.55■■■□□ 2.64
CUL9-216ENST00000513904 JPH4Q96JJ6 628 aa31.52■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms