RNA–Protein interactions for RNA: ENST00000513691.1

SEL1L3-211, Transcript of SEL1L family member 3, humanhuman

TSL 2

Gene SEL1L3, Length 605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3-211ENST00000513691 NISCHQ9Y2I1 1504 aa40.41■■■■■ 4.06
SEL1L3-211ENST00000513691 ABCC9O60706 1549 aa36.94■■■■□ 3.5
SEL1L3-211ENST00000513691 CCDC180Q9P1Z9 1646 aa36.39■■■■□ 3.42
SEL1L3-211ENST00000513691 DNAJC5BQ9UF47 199 aa35.15■■■■□ 3.22
SEL1L3-211ENST00000513691 RB1CC1Q8TDY2 1594 aa34.91■■■■□ 3.18
SEL1L3-211ENST00000513691 NACADO15069 1562 aa34.57■■■■□ 3.13
SEL1L3-211ENST00000513691 PABPN1Q86U42 306 aaKnown RBP eCLIP34.35■■■■□ 3.09
SEL1L3-211ENST00000513691 DCAF8L2P0C7V8 631 aa34.34■■■■□ 3.09
SEL1L3-211ENST00000513691 UNC13AQ9UPW8 1703 aa34.07■■■■□ 3.04
SEL1L3-211ENST00000513691 MYO15BQ96JP2 1530 aa33.96■■■■□ 3.03
SEL1L3-211ENST00000513691 BICRAQ9NZM4 1560 aa33.94■■■■□ 3.02
SEL1L3-211ENST00000513691 SHROOM4Q9ULL8 1493 aa33.41■■■□□ 2.94
SEL1L3-211ENST00000513691 ZCCHC6Q5VYS8 1495 aaKnown RBP33.37■■■□□ 2.93
SEL1L3-211ENST00000513691 DCAF1Q9Y4B6 1507 aa33.34■■■□□ 2.93
SEL1L3-211ENST00000513691 CECR2Q9BXF3 1484 aa33.32■■■□□ 2.92
SEL1L3-211ENST00000513691 CC2D2AQ9P2K1 1620 aa33.31■■■□□ 2.92
SEL1L3-211ENST00000513691 SCRIBQ14160 1630 aa33.16■■■□□ 2.9
SEL1L3-211ENST00000513691 EIF4G1Q04637 1599 aaKnown RBP33.13■■■□□ 2.89
SEL1L3-211ENST00000513691 DNAJC5Q9H3Z4 198 aa32.61■■■□□ 2.81
SEL1L3-211ENST00000513691 CUX2O14529 1486 aa32.02■■■□□ 2.72
SEL1L3-211ENST00000513691 NCAPD3P42695 1498 aa31.97■■■□□ 2.71
SEL1L3-211ENST00000513691 ERCC6Q03468 1493 aa31.9■■■□□ 2.7
SEL1L3-211ENST00000513691 ATAD2BQ9ULI0 1458 aa31.79■■■□□ 2.68
SEL1L3-211ENST00000513691 SMARCA2P51531 1590 aa31.64■■■□□ 2.65
SEL1L3-211ENST00000513691 HMGXB3Q12766 1538 aa31.63■■■□□ 2.65
SEL1L3-211ENST00000513691 NESP48681 1621 aa31.6■■■□□ 2.65
SEL1L3-211ENST00000513691 SMARCA4P51532 1647 aa31.59■■■□□ 2.65
SEL1L3-211ENST00000513691 BAZ1BQ9UIG0 1483 aaKnown RBP31.42■■■□□ 2.62
SEL1L3-211ENST00000513691 BAZ1AQ9NRL2 1556 aaPredicted RBP31.37■■■□□ 2.61
SEL1L3-211ENST00000513691 THOC2Q8NI27 1593 aaKnown RBP31.33■■■□□ 2.61
SEL1L3-211ENST00000513691 PEG3Q9GZU2 1588 aa31.3■■■□□ 2.6
SEL1L3-211ENST00000513691 LAMC3Q9Y6N6 1575 aa31.26■■■□□ 2.6
SEL1L3-211ENST00000513691 PDS5BQ9NTI5 1447 aa31.14■■■□□ 2.58
SEL1L3-211ENST00000513691 MROH2BQ7Z745 1585 aa31.13■■■□□ 2.57
SEL1L3-211ENST00000513691 KIF21AQ7Z4S6 1674 aa31.1■■■□□ 2.57
SEL1L3-211ENST00000513691 CADPSQ9ULU8 1353 aa30.97■■■□□ 2.55
SEL1L3-211ENST00000513691 TRIM41Q8WV44 630 aa30.95■■■□□ 2.55
SEL1L3-211ENST00000513691 MRC2Q9UBG0 1479 aa30.88■■■□□ 2.53
SEL1L3-211ENST00000513691 WDR62O43379 1518 aa30.82■■■□□ 2.52
SEL1L3-211ENST00000513691 WIZO95785 1651 aa30.7■■■□□ 2.5
SEL1L3-211ENST00000513691 CEP164Q9UPV0 1460 aa30.65■■■□□ 2.5
SEL1L3-211ENST00000513691 FANCD2Q9BXW9 1451 aa30.59■■■□□ 2.49
SEL1L3-211ENST00000513691 OSCARQ8IYS5 282 aa30.53■■■□□ 2.48
SEL1L3-211ENST00000513691 CFTRP13569 1480 aa30.51■■■□□ 2.48
SEL1L3-211ENST00000513691 URB2Q14146 1524 aaKnown RBP30.38■■■□□ 2.45
SEL1L3-211ENST00000513691 RSF1Q96T23 1441 aaPredicted RBP30.34■■■□□ 2.45
SEL1L3-211ENST00000513691 TOP2AP11388 1531 aaKnown RBP30.28■■■□□ 2.44
SEL1L3-211ENST00000513691 RIMBP3CA6NJZ7 1639 aa30.11■■■□□ 2.41
SEL1L3-211ENST00000513691 RIMBP3BA6NNM3 1639 aa30.11■■■□□ 2.41
SEL1L3-211ENST00000513691 RIMBP3Q9UFD9 1639 aa30.11■■■□□ 2.41
SEL1L3-211ENST00000513691 ZNF608Q9ULD9 1512 aaPredicted RBP30.1■■■□□ 2.41
SEL1L3-211ENST00000513691 IFT140Q96RY7 1462 aa30.07■■■□□ 2.4
SEL1L3-211ENST00000513691 PRDM2Q13029 1718 aa30.03■■■□□ 2.4
SEL1L3-211ENST00000513691 CCDC88BA6NC98 1476 aa29.99■■■□□ 2.39
SEL1L3-211ENST00000513691 ARHGEF11O15085 1522 aa29.99■■■□□ 2.39
SEL1L3-211ENST00000513691 TOPBP1Q92547 1522 aa29.96■■■□□ 2.39
SEL1L3-211ENST00000513691 ABCC8Q09428 1581 aa29.86■■■□□ 2.37
SEL1L3-211ENST00000513691 CYB5RLQ6IPT4 315 aa29.85■■■□□ 2.37
SEL1L3-211ENST00000513691 EIF4G3O43432 1585 aaKnown RBP29.84■■■□□ 2.37
SEL1L3-211ENST00000513691 DNMBPQ6XZF7 1577 aa29.78■■■□□ 2.36
SEL1L3-211ENST00000513691 AQRO60306 1485 aaKnown RBP eCLIP29.77■■■□□ 2.36
SEL1L3-211ENST00000513691 TARBP1Q13395 1621 aaKnown RBP29.72■■■□□ 2.35
SEL1L3-211ENST00000513691 CHD1O14646 1710 aa29.68■■■□□ 2.34
SEL1L3-211ENST00000513691 ARAP1Q96P48 1450 aa29.67■■■□□ 2.34
SEL1L3-211ENST00000513691 FBLN2P98095 1184 aa29.66■■■□□ 2.34
SEL1L3-211ENST00000513691 TRHP20396 242 aaPredicted RBP29.64■■■□□ 2.34
SEL1L3-211ENST00000513691 POLA1P09884 1462 aaPredicted RBP29.62■■■□□ 2.33
SEL1L3-211ENST00000513691 RAD54L2Q9Y4B4 1467 aa29.54■■■□□ 2.32
SEL1L3-211ENST00000513691 TDRD9Q8NDG6 1382 aaKnown RBP29.52■■■□□ 2.32
SEL1L3-211ENST00000513691 SOGA1O94964 1423 aa29.51■■■□□ 2.31
SEL1L3-211ENST00000513691 SNAPC4Q5SXM2 1469 aa29.42■■■□□ 2.3
SEL1L3-211ENST00000513691 CLASP1Q7Z460 1538 aa29.39■■■□□ 2.3
SEL1L3-211ENST00000513691 CHMP7Q8WUX9 453 aaPredicted RBP29.37■■■□□ 2.29
SEL1L3-211ENST00000513691 FGD5Q6ZNL6 1462 aa29.36■■■□□ 2.29
SEL1L3-211ENST00000513691 WDR97A6NE52 1622 aa29.35■■■□□ 2.29
SEL1L3-211ENST00000513691 MAGI1Q96QZ7 1491 aaPredicted RBP29.32■■■□□ 2.28
SEL1L3-211ENST00000513691 SYNJ1O43426 1573 aa29.3■■■□□ 2.28
SEL1L3-211ENST00000513691 GRIN2BQ13224 1484 aa29.28■■■□□ 2.28
SEL1L3-211ENST00000513691 CUX1P39880 1505 aa29.27■■■□□ 2.28
SEL1L3-211ENST00000513691 SYNJ2O15056 1496 aa29.24■■■□□ 2.27
SEL1L3-211ENST00000513691 GAPVD1Q14C86 1478 aa29.12■■■□□ 2.25
SEL1L3-211ENST00000513691 AEBP2Q6ZN18 517 aaPredicted RBP29.12■■■□□ 2.25
SEL1L3-211ENST00000513691 PBRM1Q86U86 1689 aa29.05■■■□□ 2.24
SEL1L3-211ENST00000513691 ABCA10Q8WWZ4 1543 aa29.01■■■□□ 2.23
SEL1L3-211ENST00000513691 ABCA5Q8WWZ7 1642 aa28.98■■■□□ 2.23
SEL1L3-211ENST00000513691 ERCC6L2Q5T890 1561 aa28.92■■■□□ 2.22
SEL1L3-211ENST00000513691 GRIN2AQ12879 1464 aa28.9■■■□□ 2.22
SEL1L3-211ENST00000513691 NUP160Q12769 1436 aa28.85■■■□□ 2.21
SEL1L3-211ENST00000513691 CEP170Q5SW79 1584 aa28.82■■■□□ 2.2
SEL1L3-211ENST00000513691 WRNQ14191 1432 aaPredicted RBP eCLIP28.81■■■□□ 2.2
SEL1L3-211ENST00000513691 ADAMTS12P58397 1594 aa28.79■■■□□ 2.2
SEL1L3-211ENST00000513691 FHAD1B1AJZ9 1412 aa28.74■■■□□ 2.19
SEL1L3-211ENST00000513691 SHROOM2Q13796 1616 aa28.72■■■□□ 2.19
SEL1L3-211ENST00000513691 TOP2BQ02880 1626 aa28.65■■■□□ 2.18
SEL1L3-211ENST00000513691 BIVM-ERCC5R4GMW8 1640 aa28.64■■■□□ 2.18
SEL1L3-211ENST00000513691 SUPT5HO00267 1087 aaKnown RBP28.63■■■□□ 2.17
SEL1L3-211ENST00000513691 ERICH3Q5RHP9 1530 aa28.63■■■□□ 2.17
SEL1L3-211ENST00000513691 PRG4Q92954 1404 aaPredicted RBP28.6■■■□□ 2.17
SEL1L3-211ENST00000513691 JPH4Q96JJ6 628 aa28.58■■■□□ 2.17
SEL1L3-211ENST00000513691 KIF13AQ9H1H9 1805 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 169 ms