RNA–Protein interactions for RNA: ENST00000513598.5

CTNND2-216, Transcript of catenin delta 2, humanhuman

TSL 3

Gene CTNND2, Length 720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-216ENST00000513598 NISCHQ9Y2I1 1504 aa55.16■■■■■ 6.42
CTNND2-216ENST00000513598 CCDC180Q9P1Z9 1646 aa49.28■■■■■ 5.48
CTNND2-216ENST00000513598 ABCC9O60706 1549 aa49.24■■■■■ 5.47
CTNND2-216ENST00000513598 RB1CC1Q8TDY2 1594 aa46.85■■■■■ 5.09
CTNND2-216ENST00000513598 DCAF8L2P0C7V8 631 aa46.63■■■■■ 5.06
CTNND2-216ENST00000513598 NACADO15069 1562 aa46.58■■■■■ 5.05
CTNND2-216ENST00000513598 DNAJC5BQ9UF47 199 aa46.15■■■■■ 4.98
CTNND2-216ENST00000513598 PABPN1Q86U42 306 aaKnown RBP eCLIP45.98■■■■■ 4.95
CTNND2-216ENST00000513598 MYO15BQ96JP2 1530 aa45.96■■■■■ 4.95
CTNND2-216ENST00000513598 UNC13AQ9UPW8 1703 aa45.9■■■■■ 4.94
CTNND2-216ENST00000513598 ZCCHC6Q5VYS8 1495 aaKnown RBP45.73■■■■■ 4.91
CTNND2-216ENST00000513598 BICRAQ9NZM4 1560 aa45.58■■■■■ 4.89
CTNND2-216ENST00000513598 DCAF1Q9Y4B6 1507 aa45.48■■■■■ 4.87
CTNND2-216ENST00000513598 SCRIBQ14160 1630 aa45.04■■■■■ 4.8
CTNND2-216ENST00000513598 SHROOM4Q9ULL8 1493 aa44.77■■■■■ 4.76
CTNND2-216ENST00000513598 CC2D2AQ9P2K1 1620 aa44.46■■■■■ 4.71
CTNND2-216ENST00000513598 EIF4G1Q04637 1599 aaKnown RBP44.39■■■■■ 4.7
CTNND2-216ENST00000513598 CECR2Q9BXF3 1484 aa44.29■■■■■ 4.68
CTNND2-216ENST00000513598 NCAPD3P42695 1498 aa43.06■■■■■ 4.48
CTNND2-216ENST00000513598 ATAD2BQ9ULI0 1458 aa42.98■■■■■ 4.47
CTNND2-216ENST00000513598 SMARCA4P51532 1647 aa42.96■■■■■ 4.47
CTNND2-216ENST00000513598 SMARCA2P51531 1590 aa42.78■■■■■ 4.44
CTNND2-216ENST00000513598 BAZ1AQ9NRL2 1556 aaPredicted RBP42.73■■■■■ 4.43
CTNND2-216ENST00000513598 HMGXB3Q12766 1538 aa42.68■■■■■ 4.42
CTNND2-216ENST00000513598 MROH2BQ7Z745 1585 aa42.56■■■■■ 4.4
CTNND2-216ENST00000513598 BAZ1BQ9UIG0 1483 aaKnown RBP42.54■■■■■ 4.4
CTNND2-216ENST00000513598 PEG3Q9GZU2 1588 aa42.49■■■■■ 4.39
CTNND2-216ENST00000513598 ERCC6Q03468 1493 aa42.42■■■■■ 4.38
CTNND2-216ENST00000513598 NESP48681 1621 aa42.4■■■■■ 4.38
CTNND2-216ENST00000513598 CUX2O14529 1486 aa42.23■■■■■ 4.35
CTNND2-216ENST00000513598 DNAJC5Q9H3Z4 198 aa42.09■■■■■ 4.33
CTNND2-216ENST00000513598 WIZO95785 1651 aa42.06■■■■■ 4.32
CTNND2-216ENST00000513598 LAMC3Q9Y6N6 1575 aa41.99■■■■■ 4.31
CTNND2-216ENST00000513598 THOC2Q8NI27 1593 aaKnown RBP41.81■■■■■ 4.28
CTNND2-216ENST00000513598 KIF21AQ7Z4S6 1674 aa41.8■■■■■ 4.28
CTNND2-216ENST00000513598 CADPSQ9ULU8 1353 aa41.78■■■■■ 4.28
CTNND2-216ENST00000513598 PDS5BQ9NTI5 1447 aa41.77■■■■■ 4.28
CTNND2-216ENST00000513598 RSF1Q96T23 1441 aaPredicted RBP41.75■■■■■ 4.27
CTNND2-216ENST00000513598 TOP2AP11388 1531 aaKnown RBP41.45■■■■■ 4.23
CTNND2-216ENST00000513598 MRC2Q9UBG0 1479 aa41.4■■■■■ 4.22
CTNND2-216ENST00000513598 CFTRP13569 1480 aa41.33■■■■■ 4.21
CTNND2-216ENST00000513598 FANCD2Q9BXW9 1451 aa41.29■■■■■ 4.2
CTNND2-216ENST00000513598 WDR62O43379 1518 aa41.28■■■■■ 4.2
CTNND2-216ENST00000513598 CEP164Q9UPV0 1460 aa41.28■■■■■ 4.2
CTNND2-216ENST00000513598 CCDC88BA6NC98 1476 aa41.08■■■■■ 4.17
CTNND2-216ENST00000513598 URB2Q14146 1524 aaKnown RBP40.97■■■■■ 4.15
CTNND2-216ENST00000513598 PRDM2Q13029 1718 aa40.87■■■■■ 4.13
CTNND2-216ENST00000513598 TOPBP1Q92547 1522 aa40.54■■■■■ 4.08
CTNND2-216ENST00000513598 ZNF608Q9ULD9 1512 aaPredicted RBP40.46■■■■■ 4.07
CTNND2-216ENST00000513598 OSCARQ8IYS5 282 aa40.45■■■■■ 4.07
CTNND2-216ENST00000513598 IFT140Q96RY7 1462 aa40.45■■■■■ 4.07
CTNND2-216ENST00000513598 TRIM41Q8WV44 630 aa40.39■■■■■ 4.06
CTNND2-216ENST00000513598 ABCC8Q09428 1581 aa40.39■■■■■ 4.06
CTNND2-216ENST00000513598 DNMBPQ6XZF7 1577 aa40.36■■■■■ 4.05
CTNND2-216ENST00000513598 SUPT5HO00267 1087 aaKnown RBP40.18■■■■■ 4.02
CTNND2-216ENST00000513598 TARBP1Q13395 1621 aaKnown RBP40.16■■■■■ 4.02
CTNND2-216ENST00000513598 EIF4G3O43432 1585 aaKnown RBP40.15■■■■■ 4.02
CTNND2-216ENST00000513598 AQRO60306 1485 aaKnown RBP eCLIP40.14■■■■■ 4.02
CTNND2-216ENST00000513598 POLA1P09884 1462 aaPredicted RBP40.14■■■■■ 4.02
CTNND2-216ENST00000513598 RAD54L2Q9Y4B4 1467 aa40.07■■■■■ 4.01
CTNND2-216ENST00000513598 SOGA1O94964 1423 aa39.99■■■■□ 3.99
CTNND2-216ENST00000513598 CUX1P39880 1505 aa39.95■■■■□ 3.99
CTNND2-216ENST00000513598 TDRD9Q8NDG6 1382 aaKnown RBP39.93■■■■□ 3.98
CTNND2-216ENST00000513598 FGD5Q6ZNL6 1462 aa39.93■■■■□ 3.98
CTNND2-216ENST00000513598 RIMBP3CA6NJZ7 1639 aa39.87■■■■□ 3.97
CTNND2-216ENST00000513598 RIMBP3BA6NNM3 1639 aa39.87■■■■□ 3.97
CTNND2-216ENST00000513598 RIMBP3Q9UFD9 1639 aa39.87■■■■□ 3.97
CTNND2-216ENST00000513598 CHD1O14646 1710 aa39.86■■■■□ 3.97
CTNND2-216ENST00000513598 FBLN2P98095 1184 aa39.85■■■■□ 3.97
CTNND2-216ENST00000513598 ARHGEF11O15085 1522 aa39.75■■■■□ 3.95
CTNND2-216ENST00000513598 SNAPC4Q5SXM2 1469 aa39.67■■■■□ 3.94
CTNND2-216ENST00000513598 WDR97A6NE52 1622 aa39.62■■■■□ 3.93
CTNND2-216ENST00000513598 CYB5RLQ6IPT4 315 aa39.56■■■■□ 3.92
CTNND2-216ENST00000513598 GRIN2BQ13224 1484 aa39.56■■■■□ 3.92
CTNND2-216ENST00000513598 CHMP7Q8WUX9 453 aaPredicted RBP39.55■■■■□ 3.92
CTNND2-216ENST00000513598 MAGI1Q96QZ7 1491 aaPredicted RBP39.5■■■■□ 3.91
CTNND2-216ENST00000513598 GAPVD1Q14C86 1478 aa39.48■■■■□ 3.91
CTNND2-216ENST00000513598 ABCA10Q8WWZ4 1543 aa39.45■■■■□ 3.91
CTNND2-216ENST00000513598 PBRM1Q86U86 1689 aa39.42■■■■□ 3.9
CTNND2-216ENST00000513598 ARAP1Q96P48 1450 aa39.4■■■■□ 3.9
CTNND2-216ENST00000513598 SYNJ2O15056 1496 aa39.39■■■■□ 3.9
CTNND2-216ENST00000513598 CLASP1Q7Z460 1538 aa39.37■■■■□ 3.89
CTNND2-216ENST00000513598 ABCA5Q8WWZ7 1642 aa39.36■■■■□ 3.89
CTNND2-216ENST00000513598 WRNQ14191 1432 aaPredicted RBP eCLIP39.34■■■■□ 3.89
CTNND2-216ENST00000513598 SYNJ1O43426 1573 aa39.33■■■■□ 3.89
CTNND2-216ENST00000513598 TOP2BQ02880 1626 aa39.32■■■■□ 3.88
CTNND2-216ENST00000513598 BIVM-ERCC5R4GMW8 1640 aa39.31■■■■□ 3.88
CTNND2-216ENST00000513598 GRIN2AQ12879 1464 aa39.06■■■■□ 3.84
CTNND2-216ENST00000513598 ADAMTS12P58397 1594 aa39.04■■■■□ 3.84
CTNND2-216ENST00000513598 TRHP20396 242 aaPredicted RBP39.01■■■■□ 3.84
CTNND2-216ENST00000513598 FHAD1B1AJZ9 1412 aa38.97■■■■□ 3.83
CTNND2-216ENST00000513598 CEP170Q5SW79 1584 aa38.94■■■■□ 3.82
CTNND2-216ENST00000513598 ERICH3Q5RHP9 1530 aa38.94■■■■□ 3.82
CTNND2-216ENST00000513598 NUP160Q12769 1436 aa38.92■■■■□ 3.82
CTNND2-216ENST00000513598 ERCC6L2Q5T890 1561 aa38.88■■■■□ 3.81
CTNND2-216ENST00000513598 SHROOM2Q13796 1616 aa38.71■■■■□ 3.79
CTNND2-216ENST00000513598 JPH4Q96JJ6 628 aa38.62■■■■□ 3.77
CTNND2-216ENST00000513598 IGF1RP08069 1367 aa38.61■■■■□ 3.77
CTNND2-216ENST00000513598 PRG4Q92954 1404 aaPredicted RBP38.57■■■■□ 3.77
CTNND2-216ENST00000513598 KIF27Q86VH2 1401 aa38.55■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms