RNA–Protein interactions for RNA: ENST00000513567.5

GABRB1-205, Transcript of gamma-aminobutyric acid type A receptor beta1 subunit, humanhuman

TSL 4

Gene GABRB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1-205ENST00000513567 NISCHQ9Y2I1 1504 aa37.77■■■■□ 3.64
GABRB1-205ENST00000513567 CCDC180Q9P1Z9 1646 aa33.79■■■■□ 3
GABRB1-205ENST00000513567 ABCC9O60706 1549 aa33.75■■■□□ 2.99
GABRB1-205ENST00000513567 RB1CC1Q8TDY2 1594 aa32.07■■■□□ 2.72
GABRB1-205ENST00000513567 NACADO15069 1562 aa31.88■■■□□ 2.69
GABRB1-205ENST00000513567 DCAF8L2P0C7V8 631 aa31.76■■■□□ 2.67
GABRB1-205ENST00000513567 DNAJC5BQ9UF47 199 aa31.64■■■□□ 2.66
GABRB1-205ENST00000513567 UNC13AQ9UPW8 1703 aa31.53■■■□□ 2.64
GABRB1-205ENST00000513567 MYO15BQ96JP2 1530 aa31.46■■■□□ 2.63
GABRB1-205ENST00000513567 PABPN1Q86U42 306 aaKnown RBP eCLIP31.45■■■□□ 2.63
GABRB1-205ENST00000513567 ZCCHC6Q5VYS8 1495 aaKnown RBP31.34■■■□□ 2.61
GABRB1-205ENST00000513567 BICRAQ9NZM4 1560 aa31.3■■■□□ 2.6
GABRB1-205ENST00000513567 DCAF1Q9Y4B6 1507 aa31.14■■■□□ 2.57
GABRB1-205ENST00000513567 SCRIBQ14160 1630 aa30.89■■■□□ 2.54
GABRB1-205ENST00000513567 SHROOM4Q9ULL8 1493 aa30.65■■■□□ 2.5
GABRB1-205ENST00000513567 CC2D2AQ9P2K1 1620 aa30.49■■■□□ 2.47
GABRB1-205ENST00000513567 EIF4G1Q04637 1599 aaKnown RBP30.44■■■□□ 2.46
GABRB1-205ENST00000513567 CECR2Q9BXF3 1484 aa30.33■■■□□ 2.45
GABRB1-205ENST00000513567 NCAPD3P42695 1498 aa29.46■■■□□ 2.31
GABRB1-205ENST00000513567 SMARCA4P51532 1647 aa29.45■■■□□ 2.31
GABRB1-205ENST00000513567 ATAD2BQ9ULI0 1458 aa29.43■■■□□ 2.3
GABRB1-205ENST00000513567 SMARCA2P51531 1590 aa29.28■■■□□ 2.28
GABRB1-205ENST00000513567 HMGXB3Q12766 1538 aa29.25■■■□□ 2.27
GABRB1-205ENST00000513567 BAZ1AQ9NRL2 1556 aaPredicted RBP29.25■■■□□ 2.27
GABRB1-205ENST00000513567 MROH2BQ7Z745 1585 aa29.18■■■□□ 2.26
GABRB1-205ENST00000513567 PEG3Q9GZU2 1588 aa29.13■■■□□ 2.25
GABRB1-205ENST00000513567 BAZ1BQ9UIG0 1483 aaKnown RBP29.1■■■□□ 2.25
GABRB1-205ENST00000513567 NESP48681 1621 aa29.09■■■□□ 2.25
GABRB1-205ENST00000513567 ERCC6Q03468 1493 aa29.02■■■□□ 2.24
GABRB1-205ENST00000513567 CUX2O14529 1486 aa28.92■■■□□ 2.22
GABRB1-205ENST00000513567 WIZO95785 1651 aa28.84■■■□□ 2.21
GABRB1-205ENST00000513567 DNAJC5Q9H3Z4 198 aa28.79■■■□□ 2.2
GABRB1-205ENST00000513567 LAMC3Q9Y6N6 1575 aa28.75■■■□□ 2.19
GABRB1-205ENST00000513567 THOC2Q8NI27 1593 aaKnown RBP28.74■■■□□ 2.19
GABRB1-205ENST00000513567 KIF21AQ7Z4S6 1674 aa28.7■■■□□ 2.18
GABRB1-205ENST00000513567 RSF1Q96T23 1441 aaPredicted RBP28.57■■■□□ 2.16
GABRB1-205ENST00000513567 CADPSQ9ULU8 1353 aa28.56■■■□□ 2.16
GABRB1-205ENST00000513567 PDS5BQ9NTI5 1447 aa28.53■■■□□ 2.16
GABRB1-205ENST00000513567 TOP2AP11388 1531 aaKnown RBP28.4■■■□□ 2.14
GABRB1-205ENST00000513567 MRC2Q9UBG0 1479 aa28.35■■■□□ 2.13
GABRB1-205ENST00000513567 WDR62O43379 1518 aa28.32■■■□□ 2.12
GABRB1-205ENST00000513567 CFTRP13569 1480 aa28.29■■■□□ 2.12
GABRB1-205ENST00000513567 FANCD2Q9BXW9 1451 aa28.27■■■□□ 2.12
GABRB1-205ENST00000513567 CEP164Q9UPV0 1460 aa28.25■■■□□ 2.11
GABRB1-205ENST00000513567 CCDC88BA6NC98 1476 aa28.11■■■□□ 2.09
GABRB1-205ENST00000513567 URB2Q14146 1524 aaKnown RBP28.1■■■□□ 2.09
GABRB1-205ENST00000513567 PRDM2Q13029 1718 aa28.04■■■□□ 2.08
GABRB1-205ENST00000513567 TOPBP1Q92547 1522 aa27.77■■■□□ 2.04
GABRB1-205ENST00000513567 ZNF608Q9ULD9 1512 aaPredicted RBP27.75■■■□□ 2.03
GABRB1-205ENST00000513567 IFT140Q96RY7 1462 aa27.67■■■□□ 2.02
GABRB1-205ENST00000513567 DNMBPQ6XZF7 1577 aa27.65■■■□□ 2.02
GABRB1-205ENST00000513567 TRIM41Q8WV44 630 aa27.61■■■□□ 2.01
GABRB1-205ENST00000513567 OSCARQ8IYS5 282 aa27.59■■■□□ 2.01
GABRB1-205ENST00000513567 EIF4G3O43432 1585 aaKnown RBP27.56■■■□□ 2
GABRB1-205ENST00000513567 ABCC8Q09428 1581 aa27.56■■■□□ 2
GABRB1-205ENST00000513567 TARBP1Q13395 1621 aaKnown RBP27.55■■■□□ 2
GABRB1-205ENST00000513567 POLA1P09884 1462 aaPredicted RBP27.51■■□□□ 1.99
GABRB1-205ENST00000513567 AQRO60306 1485 aaKnown RBP eCLIP27.47■■□□□ 1.99
GABRB1-205ENST00000513567 RAD54L2Q9Y4B4 1467 aa27.45■■□□□ 1.99
GABRB1-205ENST00000513567 CUX1P39880 1505 aa27.39■■□□□ 1.98
GABRB1-205ENST00000513567 SUPT5HO00267 1087 aaKnown RBP27.37■■□□□ 1.97
GABRB1-205ENST00000513567 RIMBP3CA6NJZ7 1639 aa27.36■■□□□ 1.97
GABRB1-205ENST00000513567 RIMBP3BA6NNM3 1639 aa27.36■■□□□ 1.97
GABRB1-205ENST00000513567 RIMBP3Q9UFD9 1639 aa27.36■■□□□ 1.97
GABRB1-205ENST00000513567 CHD1O14646 1710 aa27.36■■□□□ 1.97
GABRB1-205ENST00000513567 FGD5Q6ZNL6 1462 aa27.35■■□□□ 1.97
GABRB1-205ENST00000513567 SOGA1O94964 1423 aa27.33■■□□□ 1.96
GABRB1-205ENST00000513567 TDRD9Q8NDG6 1382 aaKnown RBP27.31■■□□□ 1.96
GABRB1-205ENST00000513567 ARHGEF11O15085 1522 aa27.26■■□□□ 1.95
GABRB1-205ENST00000513567 WDR97A6NE52 1622 aa27.2■■□□□ 1.95
GABRB1-205ENST00000513567 SNAPC4Q5SXM2 1469 aa27.19■■□□□ 1.94
GABRB1-205ENST00000513567 FBLN2P98095 1184 aa27.17■■□□□ 1.94
GABRB1-205ENST00000513567 GRIN2BQ13224 1484 aa27.06■■□□□ 1.92
GABRB1-205ENST00000513567 PBRM1Q86U86 1689 aa27.05■■□□□ 1.92
GABRB1-205ENST00000513567 ARAP1Q96P48 1450 aa27.04■■□□□ 1.92
GABRB1-205ENST00000513567 MAGI1Q96QZ7 1491 aaPredicted RBP27.03■■□□□ 1.92
GABRB1-205ENST00000513567 CLASP1Q7Z460 1538 aa27.02■■□□□ 1.92
GABRB1-205ENST00000513567 ABCA5Q8WWZ7 1642 aa27.01■■□□□ 1.92
GABRB1-205ENST00000513567 ABCA10Q8WWZ4 1543 aa27.01■■□□□ 1.91
GABRB1-205ENST00000513567 GAPVD1Q14C86 1478 aa27■■□□□ 1.91
GABRB1-205ENST00000513567 CYB5RLQ6IPT4 315 aa27■■□□□ 1.91
GABRB1-205ENST00000513567 SYNJ1O43426 1573 aa26.97■■□□□ 1.91
GABRB1-205ENST00000513567 SYNJ2O15056 1496 aa26.96■■□□□ 1.91
GABRB1-205ENST00000513567 CHMP7Q8WUX9 453 aaPredicted RBP26.96■■□□□ 1.91
GABRB1-205ENST00000513567 BIVM-ERCC5R4GMW8 1640 aa26.95■■□□□ 1.91
GABRB1-205ENST00000513567 TOP2BQ02880 1626 aa26.93■■□□□ 1.9
GABRB1-205ENST00000513567 WRNQ14191 1432 aaPredicted RBP eCLIP26.89■■□□□ 1.89
GABRB1-205ENST00000513567 ADAMTS12P58397 1594 aa26.8■■□□□ 1.88
GABRB1-205ENST00000513567 GRIN2AQ12879 1464 aa26.74■■□□□ 1.87
GABRB1-205ENST00000513567 CEP170Q5SW79 1584 aa26.72■■□□□ 1.87
GABRB1-205ENST00000513567 ERCC6L2Q5T890 1561 aa26.71■■□□□ 1.87
GABRB1-205ENST00000513567 NUP160Q12769 1436 aa26.66■■□□□ 1.86
GABRB1-205ENST00000513567 ERICH3Q5RHP9 1530 aa26.65■■□□□ 1.86
GABRB1-205ENST00000513567 FHAD1B1AJZ9 1412 aa26.64■■□□□ 1.85
GABRB1-205ENST00000513567 TRHP20396 242 aaPredicted RBP26.61■■□□□ 1.85
GABRB1-205ENST00000513567 SHROOM2Q13796 1616 aa26.56■■□□□ 1.84
GABRB1-205ENST00000513567 RUSC2Q8N2Y8 1516 aa26.42■■□□□ 1.82
GABRB1-205ENST00000513567 IGF1RP08069 1367 aa26.38■■□□□ 1.81
GABRB1-205ENST00000513567 PRG4Q92954 1404 aaPredicted RBP26.38■■□□□ 1.81
GABRB1-205ENST00000513567 JPH4Q96JJ6 628 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms