RNA–Protein interactions for RNA: ENST00000513507.5

APBB3-220, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 3

Gene APBB3, Length 723 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-220ENST00000513507 NISCHQ9Y2I1 1504 aa38.87■■■■□ 3.81
APBB3-220ENST00000513507 CCDC180Q9P1Z9 1646 aa34.8■■■■□ 3.16
APBB3-220ENST00000513507 ABCC9O60706 1549 aa34.24■■■■□ 3.07
APBB3-220ENST00000513507 RB1CC1Q8TDY2 1594 aa32.87■■■□□ 2.85
APBB3-220ENST00000513507 NACADO15069 1562 aa32.79■■■□□ 2.84
APBB3-220ENST00000513507 MYO15BQ96JP2 1530 aa32.58■■■□□ 2.81
APBB3-220ENST00000513507 DCAF8L2P0C7V8 631 aa32.33■■■□□ 2.77
APBB3-220ENST00000513507 ZCCHC6Q5VYS8 1495 aaKnown RBP32.29■■■□□ 2.76
APBB3-220ENST00000513507 DCAF1Q9Y4B6 1507 aa32.26■■■□□ 2.75
APBB3-220ENST00000513507 UNC13AQ9UPW8 1703 aa32.2■■■□□ 2.75
APBB3-220ENST00000513507 BICRAQ9NZM4 1560 aa31.96■■■□□ 2.71
APBB3-220ENST00000513507 DNAJC5BQ9UF47 199 aa31.9■■■□□ 2.7
APBB3-220ENST00000513507 PABPN1Q86U42 306 aaKnown RBP eCLIP31.88■■■□□ 2.69
APBB3-220ENST00000513507 SHROOM4Q9ULL8 1493 aa31.64■■■□□ 2.66
APBB3-220ENST00000513507 SCRIBQ14160 1630 aa31.52■■■□□ 2.64
APBB3-220ENST00000513507 EIF4G1Q04637 1599 aaKnown RBP31.09■■■□□ 2.57
APBB3-220ENST00000513507 CC2D2AQ9P2K1 1620 aa31.05■■■□□ 2.56
APBB3-220ENST00000513507 CECR2Q9BXF3 1484 aa30.86■■■□□ 2.53
APBB3-220ENST00000513507 NCAPD3P42695 1498 aa30.28■■■□□ 2.44
APBB3-220ENST00000513507 SMARCA4P51532 1647 aa30.22■■■□□ 2.43
APBB3-220ENST00000513507 ATAD2BQ9ULI0 1458 aa30.18■■■□□ 2.42
APBB3-220ENST00000513507 BAZ1AQ9NRL2 1556 aaPredicted RBP30.13■■■□□ 2.41
APBB3-220ENST00000513507 SMARCA2P51531 1590 aa30.11■■■□□ 2.41
APBB3-220ENST00000513507 HMGXB3Q12766 1538 aa30.07■■■□□ 2.4
APBB3-220ENST00000513507 PEG3Q9GZU2 1588 aa30.06■■■□□ 2.4
APBB3-220ENST00000513507 MROH2BQ7Z745 1585 aa29.9■■■□□ 2.38
APBB3-220ENST00000513507 BAZ1BQ9UIG0 1483 aaKnown RBP29.82■■■□□ 2.36
APBB3-220ENST00000513507 WIZO95785 1651 aa29.54■■■□□ 2.32
APBB3-220ENST00000513507 NESP48681 1621 aa29.54■■■□□ 2.32
APBB3-220ENST00000513507 LAMC3Q9Y6N6 1575 aa29.52■■■□□ 2.32
APBB3-220ENST00000513507 CUX2O14529 1486 aa29.5■■■□□ 2.31
APBB3-220ENST00000513507 ERCC6Q03468 1493 aa29.49■■■□□ 2.31
APBB3-220ENST00000513507 RSF1Q96T23 1441 aaPredicted RBP29.43■■■□□ 2.3
APBB3-220ENST00000513507 CADPSQ9ULU8 1353 aa29.3■■■□□ 2.28
APBB3-220ENST00000513507 THOC2Q8NI27 1593 aaKnown RBP29.27■■■□□ 2.28
APBB3-220ENST00000513507 PDS5BQ9NTI5 1447 aa29.26■■■□□ 2.27
APBB3-220ENST00000513507 KIF21AQ7Z4S6 1674 aa29.24■■■□□ 2.27
APBB3-220ENST00000513507 TOP2AP11388 1531 aaKnown RBP29.23■■■□□ 2.27
APBB3-220ENST00000513507 CFTRP13569 1480 aa29.09■■■□□ 2.25
APBB3-220ENST00000513507 DNAJC5Q9H3Z4 198 aa29.08■■■□□ 2.25
APBB3-220ENST00000513507 MRC2Q9UBG0 1479 aa28.98■■■□□ 2.23
APBB3-220ENST00000513507 WDR62O43379 1518 aa28.95■■■□□ 2.23
APBB3-220ENST00000513507 FANCD2Q9BXW9 1451 aa28.92■■■□□ 2.22
APBB3-220ENST00000513507 CEP164Q9UPV0 1460 aa28.91■■■□□ 2.22
APBB3-220ENST00000513507 CCDC88BA6NC98 1476 aa28.88■■■□□ 2.21
APBB3-220ENST00000513507 PRDM2Q13029 1718 aa28.87■■■□□ 2.21
APBB3-220ENST00000513507 URB2Q14146 1524 aaKnown RBP28.69■■■□□ 2.18
APBB3-220ENST00000513507 ABCC8Q09428 1581 aa28.47■■■□□ 2.15
APBB3-220ENST00000513507 TOPBP1Q92547 1522 aa28.44■■■□□ 2.14
APBB3-220ENST00000513507 DNMBPQ6XZF7 1577 aa28.38■■■□□ 2.13
APBB3-220ENST00000513507 IFT140Q96RY7 1462 aa28.37■■■□□ 2.13
APBB3-220ENST00000513507 ZNF608Q9ULD9 1512 aaPredicted RBP28.24■■■□□ 2.11
APBB3-220ENST00000513507 TARBP1Q13395 1621 aaKnown RBP28.23■■■□□ 2.11
APBB3-220ENST00000513507 POLA1P09884 1462 aaPredicted RBP28.17■■■□□ 2.1
APBB3-220ENST00000513507 OSCARQ8IYS5 282 aa28.14■■■□□ 2.1
APBB3-220ENST00000513507 SUPT5HO00267 1087 aaKnown RBP28.13■■■□□ 2.09
APBB3-220ENST00000513507 EIF4G3O43432 1585 aaKnown RBP28.12■■■□□ 2.09
APBB3-220ENST00000513507 CUX1P39880 1505 aa28.08■■■□□ 2.08
APBB3-220ENST00000513507 WDR97A6NE52 1622 aa28.03■■■□□ 2.08
APBB3-220ENST00000513507 AQRO60306 1485 aaKnown RBP eCLIP28.02■■■□□ 2.085e-6■■■■□ 24
APBB3-220ENST00000513507 SOGA1O94964 1423 aa28.01■■■□□ 2.08
APBB3-220ENST00000513507 FGD5Q6ZNL6 1462 aa28.01■■■□□ 2.07
APBB3-220ENST00000513507 RAD54L2Q9Y4B4 1467 aa28■■■□□ 2.07
APBB3-220ENST00000513507 CHD1O14646 1710 aa27.87■■■□□ 2.05
APBB3-220ENST00000513507 TDRD9Q8NDG6 1382 aaKnown RBP27.86■■■□□ 2.05
APBB3-220ENST00000513507 ABCA10Q8WWZ4 1543 aa27.79■■■□□ 2.04
APBB3-220ENST00000513507 BIVM-ERCC5R4GMW8 1640 aa27.78■■■□□ 2.04
APBB3-220ENST00000513507 RIMBP3CA6NJZ7 1639 aa27.76■■■□□ 2.03
APBB3-220ENST00000513507 RIMBP3BA6NNM3 1639 aa27.76■■■□□ 2.03
APBB3-220ENST00000513507 TOP2BQ02880 1626 aa27.76■■■□□ 2.03
APBB3-220ENST00000513507 RIMBP3Q9UFD9 1639 aa27.76■■■□□ 2.03
APBB3-220ENST00000513507 GRIN2BQ13224 1484 aa27.76■■■□□ 2.03
APBB3-220ENST00000513507 MAGI1Q96QZ7 1491 aaPredicted RBP27.76■■■□□ 2.03
APBB3-220ENST00000513507 SNAPC4Q5SXM2 1469 aa27.72■■■□□ 2.03
APBB3-220ENST00000513507 ABCA5Q8WWZ7 1642 aa27.72■■■□□ 2.03
APBB3-220ENST00000513507 WRNQ14191 1432 aaPredicted RBP eCLIP27.7■■■□□ 2.03
APBB3-220ENST00000513507 ARHGEF11O15085 1522 aa27.7■■■□□ 2.02
APBB3-220ENST00000513507 GAPVD1Q14C86 1478 aa27.7■■■□□ 2.02
APBB3-220ENST00000513507 TRIM41Q8WV44 630 aa27.69■■■□□ 2.02
APBB3-220ENST00000513507 PBRM1Q86U86 1689 aa27.68■■■□□ 2.02
APBB3-220ENST00000513507 SYNJ1O43426 1573 aa27.68■■■□□ 2.02
APBB3-220ENST00000513507 SYNJ2O15056 1496 aa27.64■■■□□ 2.02
APBB3-220ENST00000513507 CLASP1Q7Z460 1538 aa27.61■■■□□ 2.01
APBB3-220ENST00000513507 FBLN2P98095 1184 aa27.6■■■□□ 2.01
APBB3-220ENST00000513507 CHMP7Q8WUX9 453 aaPredicted RBP27.56■■■□□ 2
APBB3-220ENST00000513507 ERICH3Q5RHP9 1530 aa27.46■■□□□ 1.99
APBB3-220ENST00000513507 ARAP1Q96P48 1450 aa27.44■■□□□ 1.98
APBB3-220ENST00000513507 ADAMTS12P58397 1594 aa27.43■■□□□ 1.98
APBB3-220ENST00000513507 GRIN2AQ12879 1464 aa27.4■■□□□ 1.98
APBB3-220ENST00000513507 FHAD1B1AJZ9 1412 aa27.38■■□□□ 1.97
APBB3-220ENST00000513507 CYB5RLQ6IPT4 315 aa27.37■■□□□ 1.97
APBB3-220ENST00000513507 NUP160Q12769 1436 aa27.36■■□□□ 1.97
APBB3-220ENST00000513507 CEP170Q5SW79 1584 aa27.29■■□□□ 1.96
APBB3-220ENST00000513507 SHROOM2Q13796 1616 aa27.24■■□□□ 1.95
APBB3-220ENST00000513507 IGF1RP08069 1367 aa27.16■■□□□ 1.94
APBB3-220ENST00000513507 KIF27Q86VH2 1401 aa27.16■■□□□ 1.94
APBB3-220ENST00000513507 ERCC6L2Q5T890 1561 aa27.12■■□□□ 1.93
APBB3-220ENST00000513507 CUL7Q14999 1698 aa27.1■■□□□ 1.93
APBB3-220ENST00000513507 RUSC2Q8N2Y8 1516 aa27.05■■□□□ 1.92
APBB3-220ENST00000513507 JPH4Q96JJ6 628 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms