RNA–Protein interactions for RNA: ENST00000513504.1

GATB-210, Transcript of glutamyl-tRNA amidotransferase subunit B, humanhuman

TSL 3

Gene GATB, Length 582 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATB-210ENST00000513504 NISCHQ9Y2I1 1504 aa28.02■■■□□ 2.08
GATB-210ENST00000513504 CCDC180Q9P1Z9 1646 aa24.97■■□□□ 1.59
GATB-210ENST00000513504 ABCC9O60706 1549 aa24.84■■□□□ 1.57
GATB-210ENST00000513504 RB1CC1Q8TDY2 1594 aa23.71■■□□□ 1.39
GATB-210ENST00000513504 NACADO15069 1562 aa23.64■■□□□ 1.37
GATB-210ENST00000513504 DCAF8L2P0C7V8 631 aa23.53■■□□□ 1.36
GATB-210ENST00000513504 MYO15BQ96JP2 1530 aa23.43■■□□□ 1.34
GATB-210ENST00000513504 DNAJC5BQ9UF47 199 aa23.27■■□□□ 1.32
GATB-210ENST00000513504 ZCCHC6Q5VYS8 1495 aaKnown RBP23.25■■□□□ 1.31
GATB-210ENST00000513504 PABPN1Q86U42 306 aaKnown RBP eCLIP23.21■■□□□ 1.31
GATB-210ENST00000513504 DCAF1Q9Y4B6 1507 aa23.19■■□□□ 1.3
GATB-210ENST00000513504 UNC13AQ9UPW8 1703 aa23.09■■□□□ 1.29
GATB-210ENST00000513504 BICRAQ9NZM4 1560 aa23.06■■□□□ 1.28
GATB-210ENST00000513504 SHROOM4Q9ULL8 1493 aa22.79■■□□□ 1.24
GATB-210ENST00000513504 SCRIBQ14160 1630 aa22.74■■□□□ 1.23
GATB-210ENST00000513504 EIF4G1Q04637 1599 aaKnown RBP22.46■■□□□ 1.19
GATB-210ENST00000513504 CC2D2AQ9P2K1 1620 aa22.43■■□□□ 1.18
GATB-210ENST00000513504 CECR2Q9BXF3 1484 aa22.38■■□□□ 1.17
GATB-210ENST00000513504 NCAPD3P42695 1498 aa21.89■■□□□ 1.09
GATB-210ENST00000513504 ATAD2BQ9ULI0 1458 aa21.81■■□□□ 1.08
GATB-210ENST00000513504 SMARCA4P51532 1647 aa21.76■■□□□ 1.07
GATB-210ENST00000513504 SMARCA2P51531 1590 aa21.71■■□□□ 1.07
GATB-210ENST00000513504 BAZ1AQ9NRL2 1556 aaPredicted RBP21.7■■□□□ 1.06
GATB-210ENST00000513504 HMGXB3Q12766 1538 aa21.66■■□□□ 1.06
GATB-210ENST00000513504 PEG3Q9GZU2 1588 aa21.61■■□□□ 1.05
GATB-210ENST00000513504 MROH2BQ7Z745 1585 aa21.57■■□□□ 1.04
GATB-210ENST00000513504 BAZ1BQ9UIG0 1483 aaKnown RBP21.55■■□□□ 1.04
GATB-210ENST00000513504 NESP48681 1621 aa21.4■■□□□ 1.02
GATB-210ENST00000513504 ERCC6Q03468 1493 aa21.4■■□□□ 1.02
GATB-210ENST00000513504 CUX2O14529 1486 aa21.37■■□□□ 1.01
GATB-210ENST00000513504 LAMC3Q9Y6N6 1575 aa21.27■■□□□ 1
GATB-210ENST00000513504 WIZO95785 1651 aa21.27■■□□□ 1
GATB-210ENST00000513504 RSF1Q96T23 1441 aaPredicted RBP21.25■□□□□ 0.99
GATB-210ENST00000513504 DNAJC5Q9H3Z4 198 aa21.23■□□□□ 0.99
GATB-210ENST00000513504 CADPSQ9ULU8 1353 aa21.22■□□□□ 0.99
GATB-210ENST00000513504 PDS5BQ9NTI5 1447 aa21.19■□□□□ 0.98
GATB-210ENST00000513504 THOC2Q8NI27 1593 aaKnown RBP21.11■□□□□ 0.97
GATB-210ENST00000513504 TOP2AP11388 1531 aaKnown RBP21.04■□□□□ 0.96
GATB-210ENST00000513504 KIF21AQ7Z4S6 1674 aa21.04■□□□□ 0.96
GATB-210ENST00000513504 CFTRP13569 1480 aa21.01■□□□□ 0.95
GATB-210ENST00000513504 MRC2Q9UBG0 1479 aa20.96■□□□□ 0.95
GATB-210ENST00000513504 FANCD2Q9BXW9 1451 aa20.92■□□□□ 0.94
GATB-210ENST00000513504 WDR62O43379 1518 aa20.91■□□□□ 0.94
GATB-210ENST00000513504 CEP164Q9UPV0 1460 aa20.9■□□□□ 0.94
GATB-210ENST00000513504 CCDC88BA6NC98 1476 aa20.85■□□□□ 0.93
GATB-210ENST00000513504 URB2Q14146 1524 aaKnown RBP20.74■□□□□ 0.91
GATB-210ENST00000513504 PRDM2Q13029 1718 aa20.61■□□□□ 0.89
GATB-210ENST00000513504 TOPBP1Q92547 1522 aa20.54■□□□□ 0.88
GATB-210ENST00000513504 ABCC8Q09428 1581 aa20.53■□□□□ 0.88
GATB-210ENST00000513504 IFT140Q96RY7 1462 aa20.51■□□□□ 0.87
GATB-210ENST00000513504 OSCARQ8IYS5 282 aa20.47■□□□□ 0.87
GATB-210ENST00000513504 ZNF608Q9ULD9 1512 aaPredicted RBP20.46■□□□□ 0.87
GATB-210ENST00000513504 DNMBPQ6XZF7 1577 aa20.45■□□□□ 0.86
GATB-210ENST00000513504 SUPT5HO00267 1087 aaKnown RBP20.38■□□□□ 0.85
GATB-210ENST00000513504 POLA1P09884 1462 aaPredicted RBP20.36■□□□□ 0.85
GATB-210ENST00000513504 TARBP1Q13395 1621 aaKnown RBP20.34■□□□□ 0.85
GATB-210ENST00000513504 AQRO60306 1485 aaKnown RBP eCLIP20.31■□□□□ 0.84
GATB-210ENST00000513504 SOGA1O94964 1423 aa20.28■□□□□ 0.84
GATB-210ENST00000513504 EIF4G3O43432 1585 aaKnown RBP20.28■□□□□ 0.84
GATB-210ENST00000513504 RAD54L2Q9Y4B4 1467 aa20.27■□□□□ 0.84
GATB-210ENST00000513504 TRIM41Q8WV44 630 aa20.26■□□□□ 0.83
GATB-210ENST00000513504 CUX1P39880 1505 aa20.25■□□□□ 0.83
GATB-210ENST00000513504 FGD5Q6ZNL6 1462 aa20.23■□□□□ 0.83
GATB-210ENST00000513504 TDRD9Q8NDG6 1382 aaKnown RBP20.22■□□□□ 0.83
GATB-210ENST00000513504 WDR97A6NE52 1622 aa20.13■□□□□ 0.81
GATB-210ENST00000513504 FBLN2P98095 1184 aa20.1■□□□□ 0.81
GATB-210ENST00000513504 ARHGEF11O15085 1522 aa20.07■□□□□ 0.8
GATB-210ENST00000513504 GRIN2BQ13224 1484 aa20.07■□□□□ 0.8
GATB-210ENST00000513504 RIMBP3CA6NJZ7 1639 aa20.07■□□□□ 0.8
GATB-210ENST00000513504 RIMBP3BA6NNM3 1639 aa20.07■□□□□ 0.8
GATB-210ENST00000513504 RIMBP3Q9UFD9 1639 aa20.07■□□□□ 0.8
GATB-210ENST00000513504 SNAPC4Q5SXM2 1469 aa20.06■□□□□ 0.8
GATB-210ENST00000513504 ABCA10Q8WWZ4 1543 aa20.05■□□□□ 0.8
GATB-210ENST00000513504 MAGI1Q96QZ7 1491 aaPredicted RBP20.05■□□□□ 0.8
GATB-210ENST00000513504 CHD1O14646 1710 aa20.04■□□□□ 0.8
GATB-210ENST00000513504 CHMP7Q8WUX9 453 aaPredicted RBP20.02■□□□□ 0.8
GATB-210ENST00000513504 GAPVD1Q14C86 1478 aa20.02■□□□□ 0.8
GATB-210ENST00000513504 WRNQ14191 1432 aaPredicted RBP eCLIP20.01■□□□□ 0.79
GATB-210ENST00000513504 SYNJ2O15056 1496 aa19.99■□□□□ 0.79
GATB-210ENST00000513504 TOP2BQ02880 1626 aa19.96■□□□□ 0.79
GATB-210ENST00000513504 CYB5RLQ6IPT4 315 aa19.95■□□□□ 0.78
GATB-210ENST00000513504 ABCA5Q8WWZ7 1642 aa19.94■□□□□ 0.78
GATB-210ENST00000513504 BIVM-ERCC5R4GMW8 1640 aa19.93■□□□□ 0.78
GATB-210ENST00000513504 CLASP1Q7Z460 1538 aa19.92■□□□□ 0.78
GATB-210ENST00000513504 SYNJ1O43426 1573 aa19.92■□□□□ 0.78
GATB-210ENST00000513504 ARAP1Q96P48 1450 aa19.9■□□□□ 0.78
GATB-210ENST00000513504 PBRM1Q86U86 1689 aa19.87■□□□□ 0.77
GATB-210ENST00000513504 GRIN2AQ12879 1464 aa19.8■□□□□ 0.76
GATB-210ENST00000513504 FHAD1B1AJZ9 1412 aa19.79■□□□□ 0.76
GATB-210ENST00000513504 ERICH3Q5RHP9 1530 aa19.78■□□□□ 0.76
GATB-210ENST00000513504 NUP160Q12769 1436 aa19.76■□□□□ 0.75
GATB-210ENST00000513504 ADAMTS12P58397 1594 aa19.76■□□□□ 0.75
GATB-210ENST00000513504 CEP170Q5SW79 1584 aa19.7■□□□□ 0.74
GATB-210ENST00000513504 IGF1RP08069 1367 aa19.65■□□□□ 0.74
GATB-210ENST00000513504 TRHP20396 242 aaPredicted RBP19.62■□□□□ 0.73
GATB-210ENST00000513504 ERCC6L2Q5T890 1561 aa19.61■□□□□ 0.73
GATB-210ENST00000513504 KIF27Q86VH2 1401 aa19.61■□□□□ 0.73
GATB-210ENST00000513504 SHROOM2Q13796 1616 aa19.6■□□□□ 0.73
GATB-210ENST00000513504 JPH4Q96JJ6 628 aa19.59■□□□□ 0.73
GATB-210ENST00000513504 PRG4Q92954 1404 aaPredicted RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms