RNA–Protein interactions for RNA: ENST00000513502.1

FAM193B-216, Transcript of family with sequence similarity 193 member B, humanhuman

TSL 2

Gene FAM193B, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM193B-216ENST00000513502 NISCHQ9Y2I1 1504 aa46.97■■■■■ 5.11
FAM193B-216ENST00000513502 ABCC9O60706 1549 aa42.68■■■■■ 4.42
FAM193B-216ENST00000513502 CCDC180Q9P1Z9 1646 aa42.35■■■■■ 4.37
FAM193B-216ENST00000513502 RB1CC1Q8TDY2 1594 aa40.5■■■■■ 4.07
FAM193B-216ENST00000513502 DNAJC5BQ9UF47 199 aa40.29■■■■■ 4.04
FAM193B-216ENST00000513502 NACADO15069 1562 aa40.12■■■■■ 4.01
FAM193B-216ENST00000513502 DCAF8L2P0C7V8 631 aa39.87■■■■□ 3.97
FAM193B-216ENST00000513502 PABPN1Q86U42 306 aaKnown RBP eCLIP39.67■■■■□ 3.94
FAM193B-216ENST00000513502 UNC13AQ9UPW8 1703 aa39.54■■■■□ 3.92
FAM193B-216ENST00000513502 MYO15BQ96JP2 1530 aa39.43■■■■□ 3.9
FAM193B-216ENST00000513502 BICRAQ9NZM4 1560 aa39.26■■■■□ 3.88
FAM193B-216ENST00000513502 ZCCHC6Q5VYS8 1495 aaKnown RBP38.85■■■■□ 3.81
FAM193B-216ENST00000513502 DCAF1Q9Y4B6 1507 aa38.79■■■■□ 3.8
FAM193B-216ENST00000513502 SHROOM4Q9ULL8 1493 aa38.77■■■■□ 3.8
FAM193B-216ENST00000513502 SCRIBQ14160 1630 aa38.55■■■■□ 3.76
FAM193B-216ENST00000513502 CC2D2AQ9P2K1 1620 aa38.54■■■■□ 3.76
FAM193B-216ENST00000513502 CECR2Q9BXF3 1484 aa38.5■■■■□ 3.75
FAM193B-216ENST00000513502 EIF4G1Q04637 1599 aaKnown RBP38.37■■■■□ 3.73
FAM193B-216ENST00000513502 DNAJC5Q9H3Z4 198 aa37.33■■■■□ 3.57
FAM193B-216ENST00000513502 NCAPD3P42695 1498 aa37.01■■■■□ 3.52
FAM193B-216ENST00000513502 CUX2O14529 1486 aa36.97■■■■□ 3.51
FAM193B-216ENST00000513502 ERCC6Q03468 1493 aa36.94■■■■□ 3.5
FAM193B-216ENST00000513502 ATAD2BQ9ULI0 1458 aa36.85■■■■□ 3.49
FAM193B-216ENST00000513502 SMARCA2P51531 1590 aa36.77■■■■□ 3.48
FAM193B-216ENST00000513502 SMARCA4P51532 1647 aa36.74■■■■□ 3.47
FAM193B-216ENST00000513502 HMGXB3Q12766 1538 aa36.73■■■■□ 3.47
FAM193B-216ENST00000513502 NESP48681 1621 aa36.54■■■■□ 3.44
FAM193B-216ENST00000513502 BAZ1AQ9NRL2 1556 aaPredicted RBP36.52■■■■□ 3.44
FAM193B-216ENST00000513502 BAZ1BQ9UIG0 1483 aaKnown RBP36.51■■■■□ 3.44
FAM193B-216ENST00000513502 PEG3Q9GZU2 1588 aa36.36■■■■□ 3.41
FAM193B-216ENST00000513502 LAMC3Q9Y6N6 1575 aa36.27■■■■□ 3.4
FAM193B-216ENST00000513502 THOC2Q8NI27 1593 aaKnown RBP36.26■■■■□ 3.39
FAM193B-216ENST00000513502 MROH2BQ7Z745 1585 aa36.18■■■■□ 3.38
FAM193B-216ENST00000513502 PDS5BQ9NTI5 1447 aa36.09■■■■□ 3.37
FAM193B-216ENST00000513502 KIF21AQ7Z4S6 1674 aa36.08■■■■□ 3.37
FAM193B-216ENST00000513502 CADPSQ9ULU8 1353 aa35.89■■■■□ 3.34
FAM193B-216ENST00000513502 MRC2Q9UBG0 1479 aa35.78■■■■□ 3.32
FAM193B-216ENST00000513502 WIZO95785 1651 aa35.74■■■■□ 3.31
FAM193B-216ENST00000513502 WDR62O43379 1518 aa35.69■■■■□ 3.3
FAM193B-216ENST00000513502 TRIM41Q8WV44 630 aa35.59■■■■□ 3.29
FAM193B-216ENST00000513502 CEP164Q9UPV0 1460 aa35.58■■■■□ 3.29
FAM193B-216ENST00000513502 FANCD2Q9BXW9 1451 aa35.49■■■■□ 3.27
FAM193B-216ENST00000513502 CFTRP13569 1480 aa35.39■■■■□ 3.26
FAM193B-216ENST00000513502 RSF1Q96T23 1441 aaPredicted RBP35.29■■■■□ 3.24
FAM193B-216ENST00000513502 TOP2AP11388 1531 aaKnown RBP35.27■■■■□ 3.24
FAM193B-216ENST00000513502 OSCARQ8IYS5 282 aa35.23■■■■□ 3.23
FAM193B-216ENST00000513502 URB2Q14146 1524 aaKnown RBP35.19■■■■□ 3.22
FAM193B-216ENST00000513502 PRDM2Q13029 1718 aa35.04■■■■□ 3.2
FAM193B-216ENST00000513502 IFT140Q96RY7 1462 aa34.88■■■■□ 3.17
FAM193B-216ENST00000513502 CCDC88BA6NC98 1476 aa34.86■■■■□ 3.17
FAM193B-216ENST00000513502 ZNF608Q9ULD9 1512 aaPredicted RBP34.81■■■■□ 3.16
FAM193B-216ENST00000513502 RIMBP3CA6NJZ7 1639 aa34.78■■■■□ 3.16
FAM193B-216ENST00000513502 RIMBP3BA6NNM3 1639 aa34.78■■■■□ 3.16
FAM193B-216ENST00000513502 RIMBP3Q9UFD9 1639 aa34.78■■■■□ 3.16
FAM193B-216ENST00000513502 TOPBP1Q92547 1522 aa34.76■■■■□ 3.16
FAM193B-216ENST00000513502 ABCC8Q09428 1581 aa34.71■■■■□ 3.15
FAM193B-216ENST00000513502 EIF4G3O43432 1585 aaKnown RBP34.64■■■■□ 3.14
FAM193B-216ENST00000513502 ARHGEF11O15085 1522 aa34.64■■■■□ 3.14
FAM193B-216ENST00000513502 DNMBPQ6XZF7 1577 aa34.62■■■■□ 3.13
FAM193B-216ENST00000513502 AQRO60306 1485 aaKnown RBP eCLIP34.47■■■■□ 3.116e-6■■■■□ 25.1
FAM193B-216ENST00000513502 TARBP1Q13395 1621 aaKnown RBP34.47■■■■□ 3.11
FAM193B-216ENST00000513502 CHD1O14646 1710 aa34.45■■■■□ 3.11
FAM193B-216ENST00000513502 CYB5RLQ6IPT4 315 aa34.42■■■■□ 3.1
FAM193B-216ENST00000513502 POLA1P09884 1462 aaPredicted RBP34.39■■■■□ 3.1
FAM193B-216ENST00000513502 FBLN2P98095 1184 aa34.38■■■■□ 3.09
FAM193B-216ENST00000513502 ARAP1Q96P48 1450 aa34.26■■■■□ 3.07
FAM193B-216ENST00000513502 RAD54L2Q9Y4B4 1467 aa34.26■■■■□ 3.07
FAM193B-216ENST00000513502 SOGA1O94964 1423 aa34.24■■■■□ 3.07
FAM193B-216ENST00000513502 TDRD9Q8NDG6 1382 aaKnown RBP34.21■■■■□ 3.07
FAM193B-216ENST00000513502 TRHP20396 242 aaPredicted RBP34.2■■■■□ 3.07
FAM193B-216ENST00000513502 WDR97A6NE52 1622 aa34.15■■■■□ 3.06
FAM193B-216ENST00000513502 SNAPC4Q5SXM2 1469 aa34.13■■■■□ 3.05
FAM193B-216ENST00000513502 FGD5Q6ZNL6 1462 aa34.13■■■■□ 3.05
FAM193B-216ENST00000513502 CHMP7Q8WUX9 453 aaPredicted RBP34.06■■■■□ 3.04
FAM193B-216ENST00000513502 MAGI1Q96QZ7 1491 aaPredicted RBP34.04■■■■□ 3.04
FAM193B-216ENST00000513502 CLASP1Q7Z460 1538 aa34.03■■■■□ 3.04
FAM193B-216ENST00000513502 SYNJ1O43426 1573 aa34.02■■■■□ 3.04
FAM193B-216ENST00000513502 CUX1P39880 1505 aa34.01■■■■□ 3.04
FAM193B-216ENST00000513502 GRIN2BQ13224 1484 aa33.99■■■■□ 3.03
FAM193B-216ENST00000513502 SYNJ2O15056 1496 aa33.92■■■■□ 3.02
FAM193B-216ENST00000513502 PBRM1Q86U86 1689 aa33.84■■■■□ 3.01
FAM193B-216ENST00000513502 GAPVD1Q14C86 1478 aa33.82■■■■□ 3
FAM193B-216ENST00000513502 ABCA10Q8WWZ4 1543 aa33.72■■■□□ 2.99
FAM193B-216ENST00000513502 ABCA5Q8WWZ7 1642 aa33.69■■■□□ 2.98
FAM193B-216ENST00000513502 GRIN2AQ12879 1464 aa33.55■■■□□ 2.96
FAM193B-216ENST00000513502 WRNQ14191 1432 aaPredicted RBP eCLIP33.53■■■□□ 2.96
FAM193B-216ENST00000513502 AEBP2Q6ZN18 517 aaPredicted RBP33.51■■■□□ 2.95
FAM193B-216ENST00000513502 SUPT5HO00267 1087 aaKnown RBP33.5■■■□□ 2.95
FAM193B-216ENST00000513502 ADAMTS12P58397 1594 aa33.47■■■□□ 2.95
FAM193B-216ENST00000513502 ERCC6L2Q5T890 1561 aa33.45■■■□□ 2.95
FAM193B-216ENST00000513502 NUP160Q12769 1436 aa33.43■■■□□ 2.94
FAM193B-216ENST00000513502 CEP170Q5SW79 1584 aa33.43■■■□□ 2.94
FAM193B-216ENST00000513502 BIVM-ERCC5R4GMW8 1640 aa33.4■■■□□ 2.94
FAM193B-216ENST00000513502 TOP2BQ02880 1626 aa33.39■■■□□ 2.94
FAM193B-216ENST00000513502 FHAD1B1AJZ9 1412 aa33.37■■■□□ 2.93
FAM193B-216ENST00000513502 SHROOM2Q13796 1616 aa33.32■■■□□ 2.92
FAM193B-216ENST00000513502 ERICH3Q5RHP9 1530 aa33.3■■■□□ 2.92
FAM193B-216ENST00000513502 PRG4Q92954 1404 aaPredicted RBP33.16■■■□□ 2.9
FAM193B-216ENST00000513502 JPH4Q96JJ6 628 aa33.11■■■□□ 2.89
FAM193B-216ENST00000513502 KIF13AQ9H1H9 1805 aa33.08■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms