RNA–Protein interactions for RNA: ENST00000513473.5

RBM47-211, Transcript of RNA binding motif protein 47, humanhuman

TSL 3

Gene RBM47, Length 882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-211ENST00000513473 NISCHQ9Y2I1 1504 aa45.91■■■■■ 4.94
RBM47-211ENST00000513473 CCDC180Q9P1Z9 1646 aa41.19■■■■■ 4.18
RBM47-211ENST00000513473 ABCC9O60706 1549 aa40.72■■■■■ 4.11
RBM47-211ENST00000513473 RB1CC1Q8TDY2 1594 aa39.04■■■■□ 3.84
RBM47-211ENST00000513473 NACADO15069 1562 aa38.82■■■■□ 3.81
RBM47-211ENST00000513473 DCAF8L2P0C7V8 631 aa38.65■■■■□ 3.78
RBM47-211ENST00000513473 MYO15BQ96JP2 1530 aa38.38■■■■□ 3.74
RBM47-211ENST00000513473 UNC13AQ9UPW8 1703 aa38.15■■■■□ 3.7
RBM47-211ENST00000513473 ZCCHC6Q5VYS8 1495 aaKnown RBP38.1■■■■□ 3.69
RBM47-211ENST00000513473 DCAF1Q9Y4B6 1507 aa38■■■■□ 3.67
RBM47-211ENST00000513473 PABPN1Q86U42 306 aaKnown RBP eCLIP37.91■■■■□ 3.66
RBM47-211ENST00000513473 DNAJC5BQ9UF47 199 aa37.76■■■■□ 3.64
RBM47-211ENST00000513473 BICRAQ9NZM4 1560 aa37.73■■■■□ 3.63
RBM47-211ENST00000513473 SCRIBQ14160 1630 aa37.45■■■■□ 3.59
RBM47-211ENST00000513473 SHROOM4Q9ULL8 1493 aa37.42■■■■□ 3.58
RBM47-211ENST00000513473 CC2D2AQ9P2K1 1620 aa36.85■■■■□ 3.49
RBM47-211ENST00000513473 EIF4G1Q04637 1599 aaKnown RBP36.85■■■■□ 3.49
RBM47-211ENST00000513473 CECR2Q9BXF3 1484 aa36.69■■■■□ 3.46
RBM47-211ENST00000513473 SMARCA4P51532 1647 aa35.79■■■■□ 3.32
RBM47-211ENST00000513473 NCAPD3P42695 1498 aa35.76■■■■□ 3.32
RBM47-211ENST00000513473 SMARCA2P51531 1590 aa35.71■■■■□ 3.31
RBM47-211ENST00000513473 BAZ1AQ9NRL2 1556 aaPredicted RBP35.69■■■■□ 3.3
RBM47-211ENST00000513473 ATAD2BQ9ULI0 1458 aa35.67■■■■□ 3.3
RBM47-211ENST00000513473 HMGXB3Q12766 1538 aa35.57■■■■□ 3.29
RBM47-211ENST00000513473 PEG3Q9GZU2 1588 aa35.43■■■■□ 3.26
RBM47-211ENST00000513473 BAZ1BQ9UIG0 1483 aaKnown RBP35.42■■■■□ 3.26
RBM47-211ENST00000513473 MROH2BQ7Z745 1585 aa35.33■■■■□ 3.25
RBM47-211ENST00000513473 ERCC6Q03468 1493 aa35.23■■■■□ 3.23
RBM47-211ENST00000513473 CUX2O14529 1486 aa35.04■■■■□ 3.2
RBM47-211ENST00000513473 NESP48681 1621 aa35.03■■■■□ 3.2
RBM47-211ENST00000513473 LAMC3Q9Y6N6 1575 aa35■■■■□ 3.19
RBM47-211ENST00000513473 WIZO95785 1651 aa34.98■■■■□ 3.19
RBM47-211ENST00000513473 PDS5BQ9NTI5 1447 aa34.77■■■■□ 3.16
RBM47-211ENST00000513473 KIF21AQ7Z4S6 1674 aa34.73■■■■□ 3.15
RBM47-211ENST00000513473 RSF1Q96T23 1441 aaPredicted RBP34.72■■■■□ 3.15
RBM47-211ENST00000513473 CADPSQ9ULU8 1353 aa34.7■■■■□ 3.15
RBM47-211ENST00000513473 THOC2Q8NI27 1593 aaKnown RBP34.68■■■■□ 3.14
RBM47-211ENST00000513473 DNAJC5Q9H3Z4 198 aa34.59■■■■□ 3.13
RBM47-211ENST00000513473 TOP2AP11388 1531 aaKnown RBP34.58■■■■□ 3.13
RBM47-211ENST00000513473 MRC2Q9UBG0 1479 aa34.4■■■■□ 3.1
RBM47-211ENST00000513473 CFTRP13569 1480 aa34.36■■■■□ 3.09
RBM47-211ENST00000513473 CEP164Q9UPV0 1460 aa34.36■■■■□ 3.09
RBM47-211ENST00000513473 FANCD2Q9BXW9 1451 aa34.31■■■■□ 3.08
RBM47-211ENST00000513473 WDR62O43379 1518 aa34.3■■■■□ 3.08
RBM47-211ENST00000513473 PRDM2Q13029 1718 aa34.25■■■■□ 3.07
RBM47-211ENST00000513473 CCDC88BA6NC98 1476 aa34.14■■■■□ 3.06
RBM47-211ENST00000513473 URB2Q14146 1524 aaKnown RBP33.95■■■■□ 3.03
RBM47-211ENST00000513473 ABCC8Q09428 1581 aa33.77■■■■□ 3
RBM47-211ENST00000513473 TOPBP1Q92547 1522 aa33.69■■■□□ 2.98
RBM47-211ENST00000513473 IFT140Q96RY7 1462 aa33.65■■■□□ 2.98
RBM47-211ENST00000513473 DNMBPQ6XZF7 1577 aa33.64■■■□□ 2.98
RBM47-211ENST00000513473 OSCARQ8IYS5 282 aa33.51■■■□□ 2.95
RBM47-211ENST00000513473 SUPT5HO00267 1087 aaKnown RBP33.47■■■□□ 2.95
RBM47-211ENST00000513473 ZNF608Q9ULD9 1512 aaPredicted RBP33.46■■■□□ 2.95
RBM47-211ENST00000513473 EIF4G3O43432 1585 aaKnown RBP33.39■■■□□ 2.94
RBM47-211ENST00000513473 TARBP1Q13395 1621 aaKnown RBP33.37■■■□□ 2.93
RBM47-211ENST00000513473 POLA1P09884 1462 aaPredicted RBP33.35■■■□□ 2.93
RBM47-211ENST00000513473 SOGA1O94964 1423 aa33.24■■■□□ 2.91
RBM47-211ENST00000513473 TRIM41Q8WV44 630 aa33.22■■■□□ 2.91
RBM47-211ENST00000513473 AQRO60306 1485 aaKnown RBP eCLIP33.22■■■□□ 2.91
RBM47-211ENST00000513473 FGD5Q6ZNL6 1462 aa33.2■■■□□ 2.91
RBM47-211ENST00000513473 WDR97A6NE52 1622 aa33.19■■■□□ 2.9
RBM47-211ENST00000513473 RAD54L2Q9Y4B4 1467 aa33.18■■■□□ 2.9
RBM47-211ENST00000513473 CUX1P39880 1505 aa33.18■■■□□ 2.9
RBM47-211ENST00000513473 CHD1O14646 1710 aa33.14■■■□□ 2.89
RBM47-211ENST00000513473 TDRD9Q8NDG6 1382 aaKnown RBP33.08■■■□□ 2.89
RBM47-211ENST00000513473 FBLN2P98095 1184 aa33.03■■■□□ 2.88
RBM47-211ENST00000513473 RIMBP3CA6NJZ7 1639 aa33.01■■■□□ 2.87
RBM47-211ENST00000513473 RIMBP3BA6NNM3 1639 aa33.01■■■□□ 2.87
RBM47-211ENST00000513473 RIMBP3Q9UFD9 1639 aa33.01■■■□□ 2.87
RBM47-211ENST00000513473 GRIN2BQ13224 1484 aa32.93■■■□□ 2.86
RBM47-211ENST00000513473 SNAPC4Q5SXM2 1469 aa32.93■■■□□ 2.86
RBM47-211ENST00000513473 MAGI1Q96QZ7 1491 aaPredicted RBP32.93■■■□□ 2.86
RBM47-211ENST00000513473 ARHGEF11O15085 1522 aa32.91■■■□□ 2.86
RBM47-211ENST00000513473 PBRM1Q86U86 1689 aa32.9■■■□□ 2.86
RBM47-211ENST00000513473 CHMP7Q8WUX9 453 aaPredicted RBP32.86■■■□□ 2.85
RBM47-211ENST00000513473 ABCA10Q8WWZ4 1543 aa32.86■■■□□ 2.85
RBM47-211ENST00000513473 GAPVD1Q14C86 1478 aa32.86■■■□□ 2.85
RBM47-211ENST00000513473 BIVM-ERCC5R4GMW8 1640 aa32.84■■■□□ 2.85
RBM47-211ENST00000513473 TOP2BQ02880 1626 aa32.83■■■□□ 2.85
RBM47-211ENST00000513473 WRNQ14191 1432 aaPredicted RBP eCLIP32.83■■■□□ 2.85
RBM47-211ENST00000513473 SYNJ1O43426 1573 aa32.79■■■□□ 2.84
RBM47-211ENST00000513473 ABCA5Q8WWZ7 1642 aa32.79■■■□□ 2.84
RBM47-211ENST00000513473 SYNJ2O15056 1496 aa32.79■■■□□ 2.84
RBM47-211ENST00000513473 CLASP1Q7Z460 1538 aa32.67■■■□□ 2.82
RBM47-211ENST00000513473 CYB5RLQ6IPT4 315 aa32.65■■■□□ 2.82
RBM47-211ENST00000513473 ARAP1Q96P48 1450 aa32.56■■■□□ 2.8
RBM47-211ENST00000513473 ADAMTS12P58397 1594 aa32.52■■■□□ 2.8
RBM47-211ENST00000513473 ERICH3Q5RHP9 1530 aa32.51■■■□□ 2.79
RBM47-211ENST00000513473 GRIN2AQ12879 1464 aa32.48■■■□□ 2.79
RBM47-211ENST00000513473 FHAD1B1AJZ9 1412 aa32.45■■■□□ 2.79
RBM47-211ENST00000513473 NUP160Q12769 1436 aa32.34■■■□□ 2.77
RBM47-211ENST00000513473 CEP170Q5SW79 1584 aa32.32■■■□□ 2.77
RBM47-211ENST00000513473 TRHP20396 242 aaPredicted RBP32.25■■■□□ 2.75
RBM47-211ENST00000513473 KIF27Q86VH2 1401 aa32.21■■■□□ 2.75
RBM47-211ENST00000513473 SHROOM2Q13796 1616 aa32.21■■■□□ 2.75
RBM47-211ENST00000513473 CUL7Q14999 1698 aa32.16■■■□□ 2.74
RBM47-211ENST00000513473 ERCC6L2Q5T890 1561 aa32.11■■■□□ 2.73
RBM47-211ENST00000513473 IGF1RP08069 1367 aa32.06■■■□□ 2.72
RBM47-211ENST00000513473 RUSC2Q8N2Y8 1516 aa32.05■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms