RNA–Protein interactions for RNA: ENST00000513453.5

SIL1-214, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 5

Gene SIL1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-214ENST00000513453 NISCHQ9Y2I1 1504 aa39.37■■■■□ 3.89
SIL1-214ENST00000513453 CCDC180Q9P1Z9 1646 aa35.27■■■■□ 3.24
SIL1-214ENST00000513453 ABCC9O60706 1549 aa35.06■■■■□ 3.2
SIL1-214ENST00000513453 RB1CC1Q8TDY2 1594 aa33.43■■■□□ 2.94
SIL1-214ENST00000513453 NACADO15069 1562 aa33.24■■■□□ 2.91
SIL1-214ENST00000513453 DCAF8L2P0C7V8 631 aa33.08■■■□□ 2.89
SIL1-214ENST00000513453 UNC13AQ9UPW8 1703 aa32.84■■■□□ 2.85
SIL1-214ENST00000513453 MYO15BQ96JP2 1530 aa32.83■■■□□ 2.85
SIL1-214ENST00000513453 DNAJC5BQ9UF47 199 aa32.76■■■□□ 2.83
SIL1-214ENST00000513453 ZCCHC6Q5VYS8 1495 aaKnown RBP32.68■■■□□ 2.82
SIL1-214ENST00000513453 PABPN1Q86U42 306 aaKnown RBP eCLIP32.66■■■□□ 2.82
SIL1-214ENST00000513453 BICRAQ9NZM4 1560 aa32.54■■■□□ 2.8
SIL1-214ENST00000513453 DCAF1Q9Y4B6 1507 aa32.51■■■□□ 2.79
SIL1-214ENST00000513453 SCRIBQ14160 1630 aa32.17■■■□□ 2.74
SIL1-214ENST00000513453 SHROOM4Q9ULL8 1493 aa31.98■■■□□ 2.71
SIL1-214ENST00000513453 CC2D2AQ9P2K1 1620 aa31.71■■■□□ 2.67
SIL1-214ENST00000513453 EIF4G1Q04637 1599 aaKnown RBP31.68■■■□□ 2.66
SIL1-214ENST00000513453 CECR2Q9BXF3 1484 aa31.53■■■□□ 2.64
SIL1-214ENST00000513453 SMARCA4P51532 1647 aa30.7■■■□□ 2.51
SIL1-214ENST00000513453 NCAPD3P42695 1498 aa30.69■■■□□ 2.5
SIL1-214ENST00000513453 ATAD2BQ9ULI0 1458 aa30.64■■■□□ 2.5
SIL1-214ENST00000513453 SMARCA2P51531 1590 aa30.54■■■□□ 2.48
SIL1-214ENST00000513453 BAZ1AQ9NRL2 1556 aaPredicted RBP30.52■■■□□ 2.48
SIL1-214ENST00000513453 HMGXB3Q12766 1538 aa30.49■■■□□ 2.47
SIL1-214ENST00000513453 PEG3Q9GZU2 1588 aa30.38■■■□□ 2.45
SIL1-214ENST00000513453 MROH2BQ7Z745 1585 aa30.37■■■□□ 2.45
SIL1-214ENST00000513453 BAZ1BQ9UIG0 1483 aaKnown RBP30.34■■■□□ 2.45
SIL1-214ENST00000513453 NESP48681 1621 aa30.22■■■□□ 2.43
SIL1-214ENST00000513453 ERCC6Q03468 1493 aa30.19■■■□□ 2.42
SIL1-214ENST00000513453 CUX2O14529 1486 aa30.08■■■□□ 2.41
SIL1-214ENST00000513453 WIZO95785 1651 aa30.05■■■□□ 2.4
SIL1-214ENST00000513453 LAMC3Q9Y6N6 1575 aa29.98■■■□□ 2.39
SIL1-214ENST00000513453 THOC2Q8NI27 1593 aaKnown RBP29.88■■■□□ 2.37
SIL1-214ENST00000513453 KIF21AQ7Z4S6 1674 aa29.88■■■□□ 2.37
SIL1-214ENST00000513453 DNAJC5Q9H3Z4 198 aa29.85■■■□□ 2.37
SIL1-214ENST00000513453 RSF1Q96T23 1441 aaPredicted RBP29.79■■■□□ 2.36
SIL1-214ENST00000513453 CADPSQ9ULU8 1353 aa29.75■■■□□ 2.35
SIL1-214ENST00000513453 PDS5BQ9NTI5 1447 aa29.74■■■□□ 2.35
SIL1-214ENST00000513453 TOP2AP11388 1531 aaKnown RBP29.62■■■□□ 2.33
SIL1-214ENST00000513453 MRC2Q9UBG0 1479 aa29.52■■■□□ 2.32
SIL1-214ENST00000513453 CFTRP13569 1480 aa29.48■■■□□ 2.31
SIL1-214ENST00000513453 WDR62O43379 1518 aa29.47■■■□□ 2.31
SIL1-214ENST00000513453 FANCD2Q9BXW9 1451 aa29.43■■■□□ 2.3
SIL1-214ENST00000513453 CEP164Q9UPV0 1460 aa29.43■■■□□ 2.3
SIL1-214ENST00000513453 CCDC88BA6NC98 1476 aa29.29■■■□□ 2.28
SIL1-214ENST00000513453 PRDM2Q13029 1718 aa29.29■■■□□ 2.28
SIL1-214ENST00000513453 URB2Q14146 1524 aaKnown RBP29.23■■■□□ 2.27
SIL1-214ENST00000513453 TOPBP1Q92547 1522 aa28.92■■■□□ 2.22
SIL1-214ENST00000513453 ZNF608Q9ULD9 1512 aaPredicted RBP28.84■■■□□ 2.21
SIL1-214ENST00000513453 DNMBPQ6XZF7 1577 aa28.84■■■□□ 2.21
SIL1-214ENST00000513453 IFT140Q96RY7 1462 aa28.83■■■□□ 2.21
SIL1-214ENST00000513453 ABCC8Q09428 1581 aa28.79■■■□□ 2.2
SIL1-214ENST00000513453 OSCARQ8IYS5 282 aa28.71■■■□□ 2.19
SIL1-214ENST00000513453 TARBP1Q13395 1621 aaKnown RBP28.69■■■□□ 2.18
SIL1-214ENST00000513453 EIF4G3O43432 1585 aaKnown RBP28.69■■■□□ 2.18
SIL1-214ENST00000513453 POLA1P09884 1462 aaPredicted RBP28.64■■■□□ 2.17
SIL1-214ENST00000513453 TRIM41Q8WV44 630 aa28.63■■■□□ 2.17
SIL1-214ENST00000513453 AQRO60306 1485 aaKnown RBP eCLIP28.58■■■□□ 2.17
SIL1-214ENST00000513453 SUPT5HO00267 1087 aaKnown RBP28.57■■■□□ 2.16
SIL1-214ENST00000513453 RAD54L2Q9Y4B4 1467 aa28.55■■■□□ 2.16
SIL1-214ENST00000513453 CUX1P39880 1505 aa28.53■■■□□ 2.16
SIL1-214ENST00000513453 FGD5Q6ZNL6 1462 aa28.49■■■□□ 2.15
SIL1-214ENST00000513453 CHD1O14646 1710 aa28.49■■■□□ 2.15
SIL1-214ENST00000513453 SOGA1O94964 1423 aa28.47■■■□□ 2.15
SIL1-214ENST00000513453 RIMBP3CA6NJZ7 1639 aa28.43■■■□□ 2.14
SIL1-214ENST00000513453 RIMBP3BA6NNM3 1639 aa28.43■■■□□ 2.14
SIL1-214ENST00000513453 RIMBP3Q9UFD9 1639 aa28.43■■■□□ 2.14
SIL1-214ENST00000513453 TDRD9Q8NDG6 1382 aaKnown RBP28.41■■■□□ 2.14
SIL1-214ENST00000513453 WDR97A6NE52 1622 aa28.35■■■□□ 2.13
SIL1-214ENST00000513453 ARHGEF11O15085 1522 aa28.33■■■□□ 2.13
SIL1-214ENST00000513453 SNAPC4Q5SXM2 1469 aa28.28■■■□□ 2.12
SIL1-214ENST00000513453 FBLN2P98095 1184 aa28.28■■■□□ 2.12
SIL1-214ENST00000513453 PBRM1Q86U86 1689 aa28.2■■■□□ 2.11
SIL1-214ENST00000513453 GRIN2BQ13224 1484 aa28.2■■■□□ 2.1
SIL1-214ENST00000513453 MAGI1Q96QZ7 1491 aaPredicted RBP28.18■■■□□ 2.1
SIL1-214ENST00000513453 ABCA10Q8WWZ4 1543 aa28.16■■■□□ 2.1
SIL1-214ENST00000513453 ABCA5Q8WWZ7 1642 aa28.15■■■□□ 2.1
SIL1-214ENST00000513453 GAPVD1Q14C86 1478 aa28.15■■■□□ 2.1
SIL1-214ENST00000513453 BIVM-ERCC5R4GMW8 1640 aa28.13■■■□□ 2.09
SIL1-214ENST00000513453 CLASP1Q7Z460 1538 aa28.12■■■□□ 2.09
SIL1-214ENST00000513453 SYNJ1O43426 1573 aa28.11■■■□□ 2.09
SIL1-214ENST00000513453 TOP2BQ02880 1626 aa28.1■■■□□ 2.09
SIL1-214ENST00000513453 SYNJ2O15056 1496 aa28.09■■■□□ 2.09
SIL1-214ENST00000513453 CHMP7Q8WUX9 453 aaPredicted RBP28.09■■■□□ 2.09
SIL1-214ENST00000513453 ARAP1Q96P48 1450 aa28.08■■■□□ 2.09
SIL1-214ENST00000513453 CYB5RLQ6IPT4 315 aa28.06■■■□□ 2.08
SIL1-214ENST00000513453 WRNQ14191 1432 aaPredicted RBP eCLIP28.06■■■□□ 2.08
SIL1-214ENST00000513453 ADAMTS12P58397 1594 aa27.91■■■□□ 2.06
SIL1-214ENST00000513453 GRIN2AQ12879 1464 aa27.86■■■□□ 2.05
SIL1-214ENST00000513453 CEP170Q5SW79 1584 aa27.81■■■□□ 2.04
SIL1-214ENST00000513453 ERICH3Q5RHP9 1530 aa27.8■■■□□ 2.04
SIL1-214ENST00000513453 FHAD1B1AJZ9 1412 aa27.77■■■□□ 2.04
SIL1-214ENST00000513453 NUP160Q12769 1436 aa27.76■■■□□ 2.04
SIL1-214ENST00000513453 ERCC6L2Q5T890 1561 aa27.74■■■□□ 2.03
SIL1-214ENST00000513453 SHROOM2Q13796 1616 aa27.67■■■□□ 2.02
SIL1-214ENST00000513453 TRHP20396 242 aaPredicted RBP27.65■■■□□ 2.02
SIL1-214ENST00000513453 RUSC2Q8N2Y8 1516 aa27.52■■■□□ 2
SIL1-214ENST00000513453 IGF1RP08069 1367 aa27.49■■□□□ 1.99
SIL1-214ENST00000513453 KIF27Q86VH2 1401 aa27.49■■□□□ 1.99
SIL1-214ENST00000513453 PRG4Q92954 1404 aaPredicted RBP27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms