RNA–Protein interactions for RNA: ENST00000513436.6

SERF1A-209, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 3 BASIC

Gene SERF1A, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-209ENST00000513436 NISCHQ9Y2I1 1504 aa29.85■■■□□ 2.37
SERF1A-209ENST00000513436 CCDC180Q9P1Z9 1646 aa26.61■■□□□ 1.85
SERF1A-209ENST00000513436 ABCC9O60706 1549 aa26.56■■□□□ 1.84
SERF1A-209ENST00000513436 DCAF8L2P0C7V8 631 aa25.37■■□□□ 1.65
SERF1A-209ENST00000513436 RB1CC1Q8TDY2 1594 aa25.33■■□□□ 1.64
SERF1A-209ENST00000513436 NACADO15069 1562 aa25.19■■□□□ 1.62
SERF1A-209ENST00000513436 MYO15BQ96JP2 1530 aa24.86■■□□□ 1.57
SERF1A-209ENST00000513436 PABPN1Q86U42 306 aaKnown RBP eCLIP24.83■■□□□ 1.57
SERF1A-209ENST00000513436 ZCCHC6Q5VYS8 1495 aaKnown RBP24.75■■□□□ 1.55
SERF1A-209ENST00000513436 DNAJC5BQ9UF47 199 aa24.72■■□□□ 1.55
SERF1A-209ENST00000513436 DCAF1Q9Y4B6 1507 aa24.63■■□□□ 1.53
SERF1A-209ENST00000513436 UNC13AQ9UPW8 1703 aa24.6■■□□□ 1.53
SERF1A-209ENST00000513436 BICRAQ9NZM4 1560 aa24.48■■□□□ 1.51
SERF1A-209ENST00000513436 SCRIBQ14160 1630 aa24.34■■□□□ 1.49
SERF1A-209ENST00000513436 SHROOM4Q9ULL8 1493 aa24.23■■□□□ 1.47
SERF1A-209ENST00000513436 CC2D2AQ9P2K1 1620 aa23.93■■□□□ 1.42
SERF1A-209ENST00000513436 EIF4G1Q04637 1599 aaKnown RBP23.93■■□□□ 1.42
SERF1A-209ENST00000513436 CECR2Q9BXF3 1484 aa23.9■■□□□ 1.42
SERF1A-209ENST00000513436 NCAPD3P42695 1498 aa23.27■■□□□ 1.32
SERF1A-209ENST00000513436 ATAD2BQ9ULI0 1458 aa23.23■■□□□ 1.31
SERF1A-209ENST00000513436 SMARCA4P51532 1647 aa23.2■■□□□ 1.3
SERF1A-209ENST00000513436 SMARCA2P51531 1590 aa23.18■■□□□ 1.3
SERF1A-209ENST00000513436 BAZ1AQ9NRL2 1556 aaPredicted RBP23.17■■□□□ 1.3
SERF1A-209ENST00000513436 HMGXB3Q12766 1538 aa23.06■■□□□ 1.28
SERF1A-209ENST00000513436 BAZ1BQ9UIG0 1483 aaKnown RBP23.05■■□□□ 1.28
SERF1A-209ENST00000513436 MROH2BQ7Z745 1585 aa22.99■■□□□ 1.27
SERF1A-209ENST00000513436 ERCC6Q03468 1493 aa22.97■■□□□ 1.27
SERF1A-209ENST00000513436 PEG3Q9GZU2 1588 aa22.95■■□□□ 1.26
SERF1A-209ENST00000513436 NESP48681 1621 aa22.83■■□□□ 1.24
SERF1A-209ENST00000513436 CUX2O14529 1486 aa22.77■■□□□ 1.24
SERF1A-209ENST00000513436 WIZO95785 1651 aa22.71■■□□□ 1.23
SERF1A-209ENST00000513436 LAMC3Q9Y6N6 1575 aa22.69■■□□□ 1.22
SERF1A-209ENST00000513436 PDS5BQ9NTI5 1447 aa22.65■■□□□ 1.22
SERF1A-209ENST00000513436 RSF1Q96T23 1441 aaPredicted RBP22.63■■□□□ 1.21
SERF1A-209ENST00000513436 CADPSQ9ULU8 1353 aa22.62■■□□□ 1.21
SERF1A-209ENST00000513436 DNAJC5Q9H3Z4 198 aa22.59■■□□□ 1.21
SERF1A-209ENST00000513436 THOC2Q8NI27 1593 aaKnown RBP22.47■■□□□ 1.19
SERF1A-209ENST00000513436 KIF21AQ7Z4S6 1674 aa22.47■■□□□ 1.19
SERF1A-209ENST00000513436 TOP2AP11388 1531 aaKnown RBP22.45■■□□□ 1.18
SERF1A-209ENST00000513436 MRC2Q9UBG0 1479 aa22.38■■□□□ 1.17
SERF1A-209ENST00000513436 CFTRP13569 1480 aa22.35■■□□□ 1.17
SERF1A-209ENST00000513436 CEP164Q9UPV0 1460 aa22.35■■□□□ 1.17
SERF1A-209ENST00000513436 FANCD2Q9BXW9 1451 aa22.35■■□□□ 1.17
SERF1A-209ENST00000513436 WDR62O43379 1518 aa22.26■■□□□ 1.15
SERF1A-209ENST00000513436 CCDC88BA6NC98 1476 aa22.24■■□□□ 1.15
SERF1A-209ENST00000513436 URB2Q14146 1524 aaKnown RBP22.1■■□□□ 1.13
SERF1A-209ENST00000513436 PRDM2Q13029 1718 aa22.02■■□□□ 1.11
SERF1A-209ENST00000513436 SUPT5HO00267 1087 aaKnown RBP21.97■■□□□ 1.11
SERF1A-209ENST00000513436 ABCC8Q09428 1581 aa21.93■■□□□ 1.1
SERF1A-209ENST00000513436 TOPBP1Q92547 1522 aa21.91■■□□□ 1.1
SERF1A-209ENST00000513436 OSCARQ8IYS5 282 aa21.9■■□□□ 1.1
SERF1A-209ENST00000513436 IFT140Q96RY7 1462 aa21.9■■□□□ 1.1
SERF1A-209ENST00000513436 DNMBPQ6XZF7 1577 aa21.83■■□□□ 1.09
SERF1A-209ENST00000513436 ZNF608Q9ULD9 1512 aaPredicted RBP21.8■■□□□ 1.08
SERF1A-209ENST00000513436 TRIM41Q8WV44 630 aa21.79■■□□□ 1.08
SERF1A-209ENST00000513436 POLA1P09884 1462 aaPredicted RBP21.7■■□□□ 1.06
SERF1A-209ENST00000513436 SOGA1O94964 1423 aa21.69■■□□□ 1.06
SERF1A-209ENST00000513436 AQRO60306 1485 aaKnown RBP eCLIP21.69■■□□□ 1.06
SERF1A-209ENST00000513436 FBLN2P98095 1184 aa21.66■■□□□ 1.06
SERF1A-209ENST00000513436 RAD54L2Q9Y4B4 1467 aa21.65■■□□□ 1.06
SERF1A-209ENST00000513436 EIF4G3O43432 1585 aaKnown RBP21.65■■□□□ 1.06
SERF1A-209ENST00000513436 TARBP1Q13395 1621 aaKnown RBP21.64■■□□□ 1.05
SERF1A-209ENST00000513436 TDRD9Q8NDG6 1382 aaKnown RBP21.62■■□□□ 1.05
SERF1A-209ENST00000513436 FGD5Q6ZNL6 1462 aa21.61■■□□□ 1.05
SERF1A-209ENST00000513436 CUX1P39880 1505 aa21.59■■□□□ 1.05
SERF1A-209ENST00000513436 CHMP7Q8WUX9 453 aaPredicted RBP21.5■■□□□ 1.03
SERF1A-209ENST00000513436 WDR97A6NE52 1622 aa21.45■■□□□ 1.02
SERF1A-209ENST00000513436 SNAPC4Q5SXM2 1469 aa21.44■■□□□ 1.02
SERF1A-209ENST00000513436 GRIN2BQ13224 1484 aa21.44■■□□□ 1.02
SERF1A-209ENST00000513436 CHD1O14646 1710 aa21.42■■□□□ 1.02
SERF1A-209ENST00000513436 RIMBP3CA6NJZ7 1639 aa21.42■■□□□ 1.02
SERF1A-209ENST00000513436 RIMBP3BA6NNM3 1639 aa21.42■■□□□ 1.02
SERF1A-209ENST00000513436 RIMBP3Q9UFD9 1639 aa21.42■■□□□ 1.02
SERF1A-209ENST00000513436 ARHGEF11O15085 1522 aa21.41■■□□□ 1.02
SERF1A-209ENST00000513436 WRNQ14191 1432 aaPredicted RBP eCLIP21.39■■□□□ 1.02
SERF1A-209ENST00000513436 GAPVD1Q14C86 1478 aa21.39■■□□□ 1.01
SERF1A-209ENST00000513436 MAGI1Q96QZ7 1491 aaPredicted RBP21.39■■□□□ 1.01
SERF1A-209ENST00000513436 CYB5RLQ6IPT4 315 aa21.39■■□□□ 1.01
SERF1A-209ENST00000513436 ABCA10Q8WWZ4 1543 aa21.36■■□□□ 1.01
SERF1A-209ENST00000513436 SYNJ2O15056 1496 aa21.33■■□□□ 1
SERF1A-209ENST00000513436 TOP2BQ02880 1626 aa21.29■■□□□ 1
SERF1A-209ENST00000513436 SYNJ1O43426 1573 aa21.28■■□□□ 1
SERF1A-209ENST00000513436 PBRM1Q86U86 1689 aa21.25■□□□□ 0.99
SERF1A-209ENST00000513436 BIVM-ERCC5R4GMW8 1640 aa21.25■□□□□ 0.99
SERF1A-209ENST00000513436 ABCA5Q8WWZ7 1642 aa21.24■□□□□ 0.99
SERF1A-209ENST00000513436 ARAP1Q96P48 1450 aa21.2■□□□□ 0.98
SERF1A-209ENST00000513436 CLASP1Q7Z460 1538 aa21.2■□□□□ 0.98
SERF1A-209ENST00000513436 TRHP20396 242 aaPredicted RBP21.15■□□□□ 0.98
SERF1A-209ENST00000513436 GRIN2AQ12879 1464 aa21.13■□□□□ 0.97
SERF1A-209ENST00000513436 FHAD1B1AJZ9 1412 aa21.13■□□□□ 0.97
SERF1A-209ENST00000513436 CHIC1Q5VXU3 224 aa21.1■□□□□ 0.97
SERF1A-209ENST00000513436 ERICH3Q5RHP9 1530 aa21.1■□□□□ 0.97
SERF1A-209ENST00000513436 ADAMTS12P58397 1594 aa21.09■□□□□ 0.97
SERF1A-209ENST00000513436 NUP160Q12769 1436 aa21.03■□□□□ 0.96
SERF1A-209ENST00000513436 CEP170Q5SW79 1584 aa21■□□□□ 0.95
SERF1A-209ENST00000513436 KIF27Q86VH2 1401 aa20.99■□□□□ 0.95
SERF1A-209ENST00000513436 JPH4Q96JJ6 628 aa20.96■□□□□ 0.95
SERF1A-209ENST00000513436 IGF1RP08069 1367 aa20.94■□□□□ 0.94
SERF1A-209ENST00000513436 ERCC6L2Q5T890 1561 aa20.9■□□□□ 0.94
SERF1A-209ENST00000513436 PRG4Q92954 1404 aaPredicted RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms