RNA–Protein interactions for RNA: ENST00000513413.2

HOXC10-203, Transcript of homeobox C10, humanhuman

TSL 2

Gene HOXC10, Length 799 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10-203ENST00000513413 NISCHQ9Y2I1 1504 aa47.95■■■■■ 5.27
HOXC10-203ENST00000513413 CCDC180Q9P1Z9 1646 aa42.87■■■■■ 4.45
HOXC10-203ENST00000513413 ABCC9O60706 1549 aa42.37■■■■■ 4.37
HOXC10-203ENST00000513413 RB1CC1Q8TDY2 1594 aa40.61■■■■■ 4.09
HOXC10-203ENST00000513413 NACADO15069 1562 aa40.47■■■■■ 4.07
HOXC10-203ENST00000513413 DCAF8L2P0C7V8 631 aa40.22■■■■■ 4.03
HOXC10-203ENST00000513413 MYO15BQ96JP2 1530 aa40.11■■■■■ 4.01
HOXC10-203ENST00000513413 ZCCHC6Q5VYS8 1495 aaKnown RBP39.82■■■■□ 3.97
HOXC10-203ENST00000513413 DCAF1Q9Y4B6 1507 aa39.72■■■■□ 3.95
HOXC10-203ENST00000513413 UNC13AQ9UPW8 1703 aa39.57■■■■□ 3.92
HOXC10-203ENST00000513413 PABPN1Q86U42 306 aaKnown RBP eCLIP39.5■■■■□ 3.91
HOXC10-203ENST00000513413 DNAJC5BQ9UF47 199 aa39.34■■■■□ 3.89
HOXC10-203ENST00000513413 BICRAQ9NZM4 1560 aa39.33■■■■□ 3.89
HOXC10-203ENST00000513413 SHROOM4Q9ULL8 1493 aa39.05■■■■□ 3.84
HOXC10-203ENST00000513413 SCRIBQ14160 1630 aa38.99■■■■□ 3.83
HOXC10-203ENST00000513413 EIF4G1Q04637 1599 aaKnown RBP38.37■■■■□ 3.73
HOXC10-203ENST00000513413 CC2D2AQ9P2K1 1620 aa38.32■■■■□ 3.73
HOXC10-203ENST00000513413 CECR2Q9BXF3 1484 aa38.18■■■■□ 3.7
HOXC10-203ENST00000513413 NCAPD3P42695 1498 aa37.35■■■■□ 3.57
HOXC10-203ENST00000513413 SMARCA4P51532 1647 aa37.29■■■■□ 3.56
HOXC10-203ENST00000513413 ATAD2BQ9ULI0 1458 aa37.25■■■■□ 3.55
HOXC10-203ENST00000513413 BAZ1AQ9NRL2 1556 aaPredicted RBP37.22■■■■□ 3.55
HOXC10-203ENST00000513413 SMARCA2P51531 1590 aa37.21■■■■□ 3.55
HOXC10-203ENST00000513413 HMGXB3Q12766 1538 aa37.1■■■■□ 3.53
HOXC10-203ENST00000513413 PEG3Q9GZU2 1588 aa37■■■■□ 3.51
HOXC10-203ENST00000513413 BAZ1BQ9UIG0 1483 aaKnown RBP36.92■■■■□ 3.5
HOXC10-203ENST00000513413 MROH2BQ7Z745 1585 aa36.89■■■■□ 3.5
HOXC10-203ENST00000513413 ERCC6Q03468 1493 aa36.62■■■■□ 3.45
HOXC10-203ENST00000513413 NESP48681 1621 aa36.49■■■■□ 3.43
HOXC10-203ENST00000513413 CUX2O14529 1486 aa36.48■■■■□ 3.43
HOXC10-203ENST00000513413 WIZO95785 1651 aa36.44■■■■□ 3.42
HOXC10-203ENST00000513413 LAMC3Q9Y6N6 1575 aa36.43■■■■□ 3.42
HOXC10-203ENST00000513413 RSF1Q96T23 1441 aaPredicted RBP36.33■■■■□ 3.41
HOXC10-203ENST00000513413 PDS5BQ9NTI5 1447 aa36.24■■■■□ 3.39
HOXC10-203ENST00000513413 CADPSQ9ULU8 1353 aa36.22■■■■□ 3.39
HOXC10-203ENST00000513413 TOP2AP11388 1531 aaKnown RBP36.09■■■■□ 3.37
HOXC10-203ENST00000513413 THOC2Q8NI27 1593 aaKnown RBP36.09■■■■□ 3.37
HOXC10-203ENST00000513413 KIF21AQ7Z4S6 1674 aa36.03■■■■□ 3.36
HOXC10-203ENST00000513413 DNAJC5Q9H3Z4 198 aa35.94■■■■□ 3.34
HOXC10-203ENST00000513413 CFTRP13569 1480 aa35.89■■■■□ 3.34
HOXC10-203ENST00000513413 MRC2Q9UBG0 1479 aa35.85■■■■□ 3.33
HOXC10-203ENST00000513413 CEP164Q9UPV0 1460 aa35.79■■■■□ 3.32
HOXC10-203ENST00000513413 FANCD2Q9BXW9 1451 aa35.77■■■■□ 3.32
HOXC10-203ENST00000513413 WDR62O43379 1518 aa35.75■■■■□ 3.31
HOXC10-203ENST00000513413 CCDC88BA6NC98 1476 aa35.66■■■■□ 3.3
HOXC10-203ENST00000513413 PRDM2Q13029 1718 aa35.52■■■■□ 3.28
HOXC10-203ENST00000513413 URB2Q14146 1524 aaKnown RBP35.42■■■■□ 3.26
HOXC10-203ENST00000513413 ABCC8Q09428 1581 aa35.2■■■■□ 3.23
HOXC10-203ENST00000513413 TOPBP1Q92547 1522 aa35.13■■■■□ 3.21
HOXC10-203ENST00000513413 IFT140Q96RY7 1462 aa35.09■■■■□ 3.21
HOXC10-203ENST00000513413 DNMBPQ6XZF7 1577 aa35.06■■■■□ 3.2
HOXC10-203ENST00000513413 SUPT5HO00267 1087 aaKnown RBP34.95■■■■□ 3.19
HOXC10-203ENST00000513413 ZNF608Q9ULD9 1512 aaPredicted RBP34.89■■■■□ 3.18
HOXC10-203ENST00000513413 OSCARQ8IYS5 282 aa34.87■■■■□ 3.17
HOXC10-203ENST00000513413 POLA1P09884 1462 aaPredicted RBP34.8■■■■□ 3.16
HOXC10-203ENST00000513413 TARBP1Q13395 1621 aaKnown RBP34.77■■■■□ 3.16
HOXC10-203ENST00000513413 EIF4G3O43432 1585 aaKnown RBP34.74■■■■□ 3.15
HOXC10-203ENST00000513413 SOGA1O94964 1423 aa34.67■■■■□ 3.14
HOXC10-203ENST00000513413 CUX1P39880 1505 aa34.65■■■■□ 3.14
HOXC10-203ENST00000513413 AQRO60306 1485 aaKnown RBP eCLIP34.64■■■■□ 3.14
HOXC10-203ENST00000513413 FGD5Q6ZNL6 1462 aa34.63■■■■□ 3.13
HOXC10-203ENST00000513413 RAD54L2Q9Y4B4 1467 aa34.61■■■■□ 3.13
HOXC10-203ENST00000513413 WDR97A6NE52 1622 aa34.57■■■■□ 3.12
HOXC10-203ENST00000513413 TDRD9Q8NDG6 1382 aaKnown RBP34.5■■■■□ 3.11
HOXC10-203ENST00000513413 TRIM41Q8WV44 630 aa34.44■■■■□ 3.1
HOXC10-203ENST00000513413 CHD1O14646 1710 aa34.36■■■■□ 3.09
HOXC10-203ENST00000513413 GRIN2BQ13224 1484 aa34.34■■■■□ 3.09
HOXC10-203ENST00000513413 FBLN2P98095 1184 aa34.34■■■■□ 3.09
HOXC10-203ENST00000513413 MAGI1Q96QZ7 1491 aaPredicted RBP34.33■■■■□ 3.09
HOXC10-203ENST00000513413 SNAPC4Q5SXM2 1469 aa34.32■■■■□ 3.08
HOXC10-203ENST00000513413 ABCA10Q8WWZ4 1543 aa34.31■■■■□ 3.08
HOXC10-203ENST00000513413 WRNQ14191 1432 aaPredicted RBP eCLIP34.28■■■■□ 3.08
HOXC10-203ENST00000513413 RIMBP3CA6NJZ7 1639 aa34.27■■■■□ 3.08
HOXC10-203ENST00000513413 RIMBP3BA6NNM3 1639 aa34.27■■■■□ 3.08
HOXC10-203ENST00000513413 RIMBP3Q9UFD9 1639 aa34.27■■■■□ 3.08
HOXC10-203ENST00000513413 GAPVD1Q14C86 1478 aa34.26■■■■□ 3.07
HOXC10-203ENST00000513413 TOP2BQ02880 1626 aa34.25■■■■□ 3.07
HOXC10-203ENST00000513413 ARHGEF11O15085 1522 aa34.24■■■■□ 3.07
HOXC10-203ENST00000513413 BIVM-ERCC5R4GMW8 1640 aa34.23■■■■□ 3.07
HOXC10-203ENST00000513413 CHMP7Q8WUX9 453 aaPredicted RBP34.21■■■■□ 3.07
HOXC10-203ENST00000513413 SYNJ2O15056 1496 aa34.18■■■■□ 3.06
HOXC10-203ENST00000513413 ABCA5Q8WWZ7 1642 aa34.18■■■■□ 3.06
HOXC10-203ENST00000513413 SYNJ1O43426 1573 aa34.15■■■■□ 3.06
HOXC10-203ENST00000513413 PBRM1Q86U86 1689 aa34.15■■■■□ 3.06
HOXC10-203ENST00000513413 CLASP1Q7Z460 1538 aa34.04■■■■□ 3.04
HOXC10-203ENST00000513413 CYB5RLQ6IPT4 315 aa33.95■■■■□ 3.03
HOXC10-203ENST00000513413 ARAP1Q96P48 1450 aa33.92■■■■□ 3.02
HOXC10-203ENST00000513413 ERICH3Q5RHP9 1530 aa33.9■■■■□ 3.02
HOXC10-203ENST00000513413 ADAMTS12P58397 1594 aa33.89■■■■□ 3.02
HOXC10-203ENST00000513413 GRIN2AQ12879 1464 aa33.88■■■■□ 3.01
HOXC10-203ENST00000513413 FHAD1B1AJZ9 1412 aa33.87■■■■□ 3.01
HOXC10-203ENST00000513413 NUP160Q12769 1436 aa33.78■■■■□ 3
HOXC10-203ENST00000513413 CEP170Q5SW79 1584 aa33.68■■■□□ 2.98
HOXC10-203ENST00000513413 KIF27Q86VH2 1401 aa33.63■■■□□ 2.97
HOXC10-203ENST00000513413 SHROOM2Q13796 1616 aa33.54■■■□□ 2.96
HOXC10-203ENST00000513413 IGF1RP08069 1367 aa33.54■■■□□ 2.96
HOXC10-203ENST00000513413 CUL7Q14999 1698 aa33.47■■■□□ 2.95
HOXC10-203ENST00000513413 ERCC6L2Q5T890 1561 aa33.46■■■□□ 2.95
HOXC10-203ENST00000513413 TRHP20396 242 aaPredicted RBP33.44■■■□□ 2.94
HOXC10-203ENST00000513413 JPH4Q96JJ6 628 aa33.42■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms