RNA–Protein interactions for RNA: ENST00000513323.5

SEC31A-236, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 3

Gene SEC31A, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-236ENST00000513323 NISCHQ9Y2I1 1504 aa32.99■■■□□ 2.87
SEC31A-236ENST00000513323 CCDC180Q9P1Z9 1646 aa29.56■■■□□ 2.32
SEC31A-236ENST00000513323 ABCC9O60706 1549 aa29.5■■■□□ 2.31
SEC31A-236ENST00000513323 RB1CC1Q8TDY2 1594 aa28.16■■■□□ 2.1
SEC31A-236ENST00000513323 NACADO15069 1562 aa28.01■■■□□ 2.07
SEC31A-236ENST00000513323 DCAF8L2P0C7V8 631 aa27.84■■■□□ 2.05
SEC31A-236ENST00000513323 MYO15BQ96JP2 1530 aa27.69■■■□□ 2.02
SEC31A-236ENST00000513323 DNAJC5BQ9UF47 199 aa27.69■■■□□ 2.02
SEC31A-236ENST00000513323 PABPN1Q86U42 306 aaKnown RBP eCLIP27.51■■□□□ 1.99
SEC31A-236ENST00000513323 UNC13AQ9UPW8 1703 aa27.4■■□□□ 1.98
SEC31A-236ENST00000513323 ZCCHC6Q5VYS8 1495 aaKnown RBP27.32■■□□□ 1.96
SEC31A-236ENST00000513323 DCAF1Q9Y4B6 1507 aa27.31■■□□□ 1.96
SEC31A-236ENST00000513323 BICRAQ9NZM4 1560 aa27.28■■□□□ 1.96
SEC31A-236ENST00000513323 SHROOM4Q9ULL8 1493 aa27.06■■□□□ 1.92
SEC31A-236ENST00000513323 SCRIBQ14160 1630 aa26.87■■□□□ 1.89
SEC31A-236ENST00000513323 CC2D2AQ9P2K1 1620 aa26.66■■□□□ 1.86
SEC31A-236ENST00000513323 EIF4G1Q04637 1599 aaKnown RBP26.63■■□□□ 1.85
SEC31A-236ENST00000513323 CECR2Q9BXF3 1484 aa26.63■■□□□ 1.85
SEC31A-236ENST00000513323 NCAPD3P42695 1498 aa25.88■■□□□ 1.73
SEC31A-236ENST00000513323 ATAD2BQ9ULI0 1458 aa25.76■■□□□ 1.71
SEC31A-236ENST00000513323 SMARCA2P51531 1590 aa25.69■■□□□ 1.7
SEC31A-236ENST00000513323 SMARCA4P51532 1647 aa25.68■■□□□ 1.7
SEC31A-236ENST00000513323 HMGXB3Q12766 1538 aa25.63■■□□□ 1.69
SEC31A-236ENST00000513323 BAZ1AQ9NRL2 1556 aaPredicted RBP25.61■■□□□ 1.69
SEC31A-236ENST00000513323 ERCC6Q03468 1493 aa25.52■■□□□ 1.68
SEC31A-236ENST00000513323 DNAJC5Q9H3Z4 198 aa25.51■■□□□ 1.67
SEC31A-236ENST00000513323 CUX2O14529 1486 aa25.51■■□□□ 1.67
SEC31A-236ENST00000513323 PEG3Q9GZU2 1588 aa25.49■■□□□ 1.67
SEC31A-236ENST00000513323 BAZ1BQ9UIG0 1483 aaKnown RBP25.49■■□□□ 1.67
SEC31A-236ENST00000513323 MROH2BQ7Z745 1585 aa25.37■■□□□ 1.65
SEC31A-236ENST00000513323 NESP48681 1621 aa25.34■■□□□ 1.65
SEC31A-236ENST00000513323 LAMC3Q9Y6N6 1575 aa25.25■■□□□ 1.63
SEC31A-236ENST00000513323 PDS5BQ9NTI5 1447 aa25.16■■□□□ 1.62
SEC31A-236ENST00000513323 CADPSQ9ULU8 1353 aa25.09■■□□□ 1.61
SEC31A-236ENST00000513323 THOC2Q8NI27 1593 aaKnown RBP25.07■■□□□ 1.6
SEC31A-236ENST00000513323 WIZO95785 1651 aa25.03■■□□□ 1.6
SEC31A-236ENST00000513323 KIF21AQ7Z4S6 1674 aa24.97■■□□□ 1.59
SEC31A-236ENST00000513323 RSF1Q96T23 1441 aaPredicted RBP24.91■■□□□ 1.58
SEC31A-236ENST00000513323 MRC2Q9UBG0 1479 aa24.87■■□□□ 1.57
SEC31A-236ENST00000513323 WDR62O43379 1518 aa24.79■■□□□ 1.56
SEC31A-236ENST00000513323 CFTRP13569 1480 aa24.78■■□□□ 1.56
SEC31A-236ENST00000513323 CEP164Q9UPV0 1460 aa24.77■■□□□ 1.56
SEC31A-236ENST00000513323 TOP2AP11388 1531 aaKnown RBP24.77■■□□□ 1.56
SEC31A-236ENST00000513323 FANCD2Q9BXW9 1451 aa24.75■■□□□ 1.55
SEC31A-236ENST00000513323 CCDC88BA6NC98 1476 aa24.51■■□□□ 1.51
SEC31A-236ENST00000513323 URB2Q14146 1524 aaKnown RBP24.51■■□□□ 1.51
SEC31A-236ENST00000513323 PRDM2Q13029 1718 aa24.44■■□□□ 1.5
SEC31A-236ENST00000513323 OSCARQ8IYS5 282 aa24.41■■□□□ 1.5
SEC31A-236ENST00000513323 ABCC8Q09428 1581 aa24.33■■□□□ 1.49
SEC31A-236ENST00000513323 IFT140Q96RY7 1462 aa24.32■■□□□ 1.48
SEC31A-236ENST00000513323 TRIM41Q8WV44 630 aa24.3■■□□□ 1.48
SEC31A-236ENST00000513323 TOPBP1Q92547 1522 aa24.27■■□□□ 1.48
SEC31A-236ENST00000513323 ZNF608Q9ULD9 1512 aaPredicted RBP24.2■■□□□ 1.46
SEC31A-236ENST00000513323 DNMBPQ6XZF7 1577 aa24.19■■□□□ 1.46
SEC31A-236ENST00000513323 EIF4G3O43432 1585 aaKnown RBP24.03■■□□□ 1.44
SEC31A-236ENST00000513323 TARBP1Q13395 1621 aaKnown RBP24.02■■□□□ 1.44
SEC31A-236ENST00000513323 POLA1P09884 1462 aaPredicted RBP24.02■■□□□ 1.44
SEC31A-236ENST00000513323 AQRO60306 1485 aaKnown RBP eCLIP24■■□□□ 1.439e-8■■■□□ 15
SEC31A-236ENST00000513323 SOGA1O94964 1423 aa23.96■■□□□ 1.43
SEC31A-236ENST00000513323 RIMBP3CA6NJZ7 1639 aa23.93■■□□□ 1.42
SEC31A-236ENST00000513323 RIMBP3BA6NNM3 1639 aa23.93■■□□□ 1.42
SEC31A-236ENST00000513323 RIMBP3Q9UFD9 1639 aa23.93■■□□□ 1.42
SEC31A-236ENST00000513323 RAD54L2Q9Y4B4 1467 aa23.91■■□□□ 1.42
SEC31A-236ENST00000513323 ARHGEF11O15085 1522 aa23.89■■□□□ 1.42
SEC31A-236ENST00000513323 FBLN2P98095 1184 aa23.88■■□□□ 1.41
SEC31A-236ENST00000513323 TDRD9Q8NDG6 1382 aaKnown RBP23.88■■□□□ 1.41
SEC31A-236ENST00000513323 WDR97A6NE52 1622 aa23.88■■□□□ 1.41
SEC31A-236ENST00000513323 FGD5Q6ZNL6 1462 aa23.87■■□□□ 1.41
SEC31A-236ENST00000513323 CUX1P39880 1505 aa23.84■■□□□ 1.41
SEC31A-236ENST00000513323 CHD1O14646 1710 aa23.83■■□□□ 1.41
SEC31A-236ENST00000513323 SUPT5HO00267 1087 aaKnown RBP23.8■■□□□ 1.4
SEC31A-236ENST00000513323 CYB5RLQ6IPT4 315 aa23.78■■□□□ 1.4
SEC31A-236ENST00000513323 CHMP7Q8WUX9 453 aaPredicted RBP23.76■■□□□ 1.39
SEC31A-236ENST00000513323 MAGI1Q96QZ7 1491 aaPredicted RBP23.75■■□□□ 1.39
SEC31A-236ENST00000513323 GRIN2BQ13224 1484 aa23.75■■□□□ 1.39
SEC31A-236ENST00000513323 SNAPC4Q5SXM2 1469 aa23.75■■□□□ 1.39
SEC31A-236ENST00000513323 SYNJ2O15056 1496 aa23.66■■□□□ 1.38
SEC31A-236ENST00000513323 GAPVD1Q14C86 1478 aa23.66■■□□□ 1.38
SEC31A-236ENST00000513323 ARAP1Q96P48 1450 aa23.65■■□□□ 1.38
SEC31A-236ENST00000513323 SYNJ1O43426 1573 aa23.65■■□□□ 1.38
SEC31A-236ENST00000513323 ABCA10Q8WWZ4 1543 aa23.64■■□□□ 1.37
SEC31A-236ENST00000513323 CLASP1Q7Z460 1538 aa23.62■■□□□ 1.37
SEC31A-236ENST00000513323 WRNQ14191 1432 aaPredicted RBP eCLIP23.59■■□□□ 1.37
SEC31A-236ENST00000513323 ABCA5Q8WWZ7 1642 aa23.54■■□□□ 1.36
SEC31A-236ENST00000513323 PBRM1Q86U86 1689 aa23.54■■□□□ 1.36
SEC31A-236ENST00000513323 TRHP20396 242 aaPredicted RBP23.5■■□□□ 1.35
SEC31A-236ENST00000513323 TOP2BQ02880 1626 aa23.48■■□□□ 1.35
SEC31A-236ENST00000513323 BIVM-ERCC5R4GMW8 1640 aa23.46■■□□□ 1.35
SEC31A-236ENST00000513323 GRIN2AQ12879 1464 aa23.42■■□□□ 1.34
SEC31A-236ENST00000513323 FHAD1B1AJZ9 1412 aa23.39■■□□□ 1.33
SEC31A-236ENST00000513323 NUP160Q12769 1436 aa23.36■■□□□ 1.33
SEC31A-236ENST00000513323 ADAMTS12P58397 1594 aa23.35■■□□□ 1.33
SEC31A-236ENST00000513323 ERICH3Q5RHP9 1530 aa23.35■■□□□ 1.33
SEC31A-236ENST00000513323 CEP170Q5SW79 1584 aa23.27■■□□□ 1.32
SEC31A-236ENST00000513323 SHROOM2Q13796 1616 aa23.2■■□□□ 1.3
SEC31A-236ENST00000513323 ERCC6L2Q5T890 1561 aa23.19■■□□□ 1.3
SEC31A-236ENST00000513323 JPH4Q96JJ6 628 aa23.17■■□□□ 1.3
SEC31A-236ENST00000513323 PRG4Q92954 1404 aaPredicted RBP23.12■■□□□ 1.29
SEC31A-236ENST00000513323 KIF27Q86VH2 1401 aa23.09■■□□□ 1.29
SEC31A-236ENST00000513323 IGF1RP08069 1367 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms