RNA–Protein interactions for RNA: ENST00000513296.2

NKD2-203, Transcript of naked cuticle homolog 2, humanhuman

TSL 2

Gene NKD2, Length 1,060 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKD2-203ENST00000513296 NISCHQ9Y2I1 1504 aa53.73■■■■■ 6.19
NKD2-203ENST00000513296 ABCC9O60706 1549 aa48.87■■■■■ 5.41
NKD2-203ENST00000513296 CCDC180Q9P1Z9 1646 aa48.4■■■■■ 5.34
NKD2-203ENST00000513296 DNAJC5BQ9UF47 199 aa46.3■■■■■ 5
NKD2-203ENST00000513296 RB1CC1Q8TDY2 1594 aa46.3■■■■■ 5
NKD2-203ENST00000513296 NACADO15069 1562 aa45.87■■■■■ 4.93
NKD2-203ENST00000513296 DCAF8L2P0C7V8 631 aa45.57■■■■■ 4.89
NKD2-203ENST00000513296 PABPN1Q86U42 306 aaKnown RBP eCLIP45.44■■■■■ 4.86
NKD2-203ENST00000513296 UNC13AQ9UPW8 1703 aa45.29■■■■■ 4.84
NKD2-203ENST00000513296 MYO15BQ96JP2 1530 aa45.09■■■■■ 4.81
NKD2-203ENST00000513296 BICRAQ9NZM4 1560 aa45■■■■■ 4.79
NKD2-203ENST00000513296 ZCCHC6Q5VYS8 1495 aaKnown RBP44.42■■■■■ 4.7
NKD2-203ENST00000513296 DCAF1Q9Y4B6 1507 aa44.34■■■■■ 4.69
NKD2-203ENST00000513296 SHROOM4Q9ULL8 1493 aa44.3■■■■■ 4.68
NKD2-203ENST00000513296 CC2D2AQ9P2K1 1620 aa44.13■■■■■ 4.65
NKD2-203ENST00000513296 SCRIBQ14160 1630 aa44.08■■■■■ 4.65
NKD2-203ENST00000513296 CECR2Q9BXF3 1484 aa44.07■■■■■ 4.65
NKD2-203ENST00000513296 EIF4G1Q04637 1599 aaKnown RBP43.91■■■■■ 4.62
NKD2-203ENST00000513296 DNAJC5Q9H3Z4 198 aa42.83■■■■■ 4.45
NKD2-203ENST00000513296 NCAPD3P42695 1498 aa42.37■■■■■ 4.37
NKD2-203ENST00000513296 CUX2O14529 1486 aa42.29■■■■■ 4.36
NKD2-203ENST00000513296 ERCC6Q03468 1493 aa42.2■■■■■ 4.35
NKD2-203ENST00000513296 ATAD2BQ9ULI0 1458 aa42.17■■■■■ 4.34
NKD2-203ENST00000513296 SMARCA4P51532 1647 aa42.02■■■■■ 4.32
NKD2-203ENST00000513296 SMARCA2P51531 1590 aa42.01■■■■■ 4.32
NKD2-203ENST00000513296 HMGXB3Q12766 1538 aa42■■■■■ 4.31
NKD2-203ENST00000513296 NESP48681 1621 aa41.87■■■■■ 4.29
NKD2-203ENST00000513296 BAZ1BQ9UIG0 1483 aaKnown RBP41.72■■■■■ 4.27
NKD2-203ENST00000513296 BAZ1AQ9NRL2 1556 aaPredicted RBP41.72■■■■■ 4.27
NKD2-203ENST00000513296 PEG3Q9GZU2 1588 aa41.61■■■■■ 4.25
NKD2-203ENST00000513296 THOC2Q8NI27 1593 aaKnown RBP41.51■■■■■ 4.24
NKD2-203ENST00000513296 LAMC3Q9Y6N6 1575 aa41.47■■■■■ 4.23
NKD2-203ENST00000513296 MROH2BQ7Z745 1585 aa41.41■■■■■ 4.22
NKD2-203ENST00000513296 KIF21AQ7Z4S6 1674 aa41.3■■■■■ 4.2
NKD2-203ENST00000513296 PDS5BQ9NTI5 1447 aa41.25■■■■■ 4.19
NKD2-203ENST00000513296 CADPSQ9ULU8 1353 aa41.06■■■■■ 4.16
NKD2-203ENST00000513296 MRC2Q9UBG0 1479 aa40.92■■■■■ 4.14
NKD2-203ENST00000513296 WIZO95785 1651 aa40.9■■■■■ 4.14
NKD2-203ENST00000513296 WDR62O43379 1518 aa40.84■■■■■ 4.13
NKD2-203ENST00000513296 TRIM41Q8WV44 630 aa40.74■■■■■ 4.11
NKD2-203ENST00000513296 CEP164Q9UPV0 1460 aa40.66■■■■■ 4.1
NKD2-203ENST00000513296 FANCD2Q9BXW9 1451 aa40.58■■■■■ 4.09
NKD2-203ENST00000513296 CFTRP13569 1480 aa40.5■■■■■ 4.07
NKD2-203ENST00000513296 RSF1Q96T23 1441 aaPredicted RBP40.38■■■■■ 4.05
NKD2-203ENST00000513296 TOP2AP11388 1531 aaKnown RBP40.32■■■■■ 4.04
NKD2-203ENST00000513296 OSCARQ8IYS5 282 aa40.31■■■■■ 4.04
NKD2-203ENST00000513296 URB2Q14146 1524 aaKnown RBP40.3■■■■■ 4.04
NKD2-203ENST00000513296 PRDM2Q13029 1718 aa40.05■■■■■ 4
NKD2-203ENST00000513296 CCDC88BA6NC98 1476 aa39.9■■■■□ 3.98
NKD2-203ENST00000513296 ZNF608Q9ULD9 1512 aaPredicted RBP39.88■■■■□ 3.97
NKD2-203ENST00000513296 IFT140Q96RY7 1462 aa39.88■■■■□ 3.97
NKD2-203ENST00000513296 RIMBP3CA6NJZ7 1639 aa39.83■■■■□ 3.97
NKD2-203ENST00000513296 RIMBP3BA6NNM3 1639 aa39.83■■■■□ 3.97
NKD2-203ENST00000513296 RIMBP3Q9UFD9 1639 aa39.83■■■■□ 3.97
NKD2-203ENST00000513296 TOPBP1Q92547 1522 aa39.77■■■■□ 3.96
NKD2-203ENST00000513296 ARHGEF11O15085 1522 aa39.65■■■■□ 3.94
NKD2-203ENST00000513296 ABCC8Q09428 1581 aa39.64■■■■□ 3.94
NKD2-203ENST00000513296 EIF4G3O43432 1585 aaKnown RBP39.62■■■■□ 3.93
NKD2-203ENST00000513296 DNMBPQ6XZF7 1577 aa39.58■■■■□ 3.93
NKD2-203ENST00000513296 TARBP1Q13395 1621 aaKnown RBP39.47■■■■□ 3.91
NKD2-203ENST00000513296 AQRO60306 1485 aaKnown RBP eCLIP39.46■■■■□ 3.91
NKD2-203ENST00000513296 CHD1O14646 1710 aa39.42■■■■□ 3.9
NKD2-203ENST00000513296 CYB5RLQ6IPT4 315 aa39.41■■■■□ 3.9
NKD2-203ENST00000513296 POLA1P09884 1462 aaPredicted RBP39.34■■■■□ 3.89
NKD2-203ENST00000513296 FBLN2P98095 1184 aa39.29■■■■□ 3.88
NKD2-203ENST00000513296 ARAP1Q96P48 1450 aa39.23■■■■□ 3.87
NKD2-203ENST00000513296 RAD54L2Q9Y4B4 1467 aa39.22■■■■□ 3.87
NKD2-203ENST00000513296 SOGA1O94964 1423 aa39.16■■■■□ 3.86
NKD2-203ENST00000513296 TDRD9Q8NDG6 1382 aaKnown RBP39.15■■■■□ 3.86
NKD2-203ENST00000513296 TRHP20396 242 aaPredicted RBP39.1■■■■□ 3.85
NKD2-203ENST00000513296 SNAPC4Q5SXM2 1469 aa39.02■■■■□ 3.84
NKD2-203ENST00000513296 FGD5Q6ZNL6 1462 aa39.02■■■■□ 3.84
NKD2-203ENST00000513296 WDR97A6NE52 1622 aa39■■■■□ 3.83
NKD2-203ENST00000513296 CLASP1Q7Z460 1538 aa38.95■■■■□ 3.83
NKD2-203ENST00000513296 CUX1P39880 1505 aa38.93■■■■□ 3.82
NKD2-203ENST00000513296 CHMP7Q8WUX9 453 aaPredicted RBP38.92■■■■□ 3.82
NKD2-203ENST00000513296 MAGI1Q96QZ7 1491 aaPredicted RBP38.9■■■■□ 3.82
NKD2-203ENST00000513296 SYNJ1O43426 1573 aa38.87■■■■□ 3.81
NKD2-203ENST00000513296 GRIN2BQ13224 1484 aa38.86■■■■□ 3.81
NKD2-203ENST00000513296 SYNJ2O15056 1496 aa38.79■■■■□ 3.8
NKD2-203ENST00000513296 PBRM1Q86U86 1689 aa38.68■■■■□ 3.78
NKD2-203ENST00000513296 GAPVD1Q14C86 1478 aa38.66■■■■□ 3.78
NKD2-203ENST00000513296 ABCA10Q8WWZ4 1543 aa38.56■■■■□ 3.76
NKD2-203ENST00000513296 ABCA5Q8WWZ7 1642 aa38.54■■■■□ 3.76
NKD2-203ENST00000513296 GRIN2AQ12879 1464 aa38.35■■■■□ 3.73
NKD2-203ENST00000513296 ERCC6L2Q5T890 1561 aa38.33■■■■□ 3.73
NKD2-203ENST00000513296 WRNQ14191 1432 aaPredicted RBP eCLIP38.3■■■■□ 3.72
NKD2-203ENST00000513296 AEBP2Q6ZN18 517 aaPredicted RBP38.29■■■■□ 3.72
NKD2-203ENST00000513296 ADAMTS12P58397 1594 aa38.27■■■■□ 3.72
NKD2-203ENST00000513296 SUPT5HO00267 1087 aaKnown RBP38.27■■■■□ 3.72
NKD2-203ENST00000513296 NUP160Q12769 1436 aa38.25■■■■□ 3.71
NKD2-203ENST00000513296 CEP170Q5SW79 1584 aa38.25■■■■□ 3.71
NKD2-203ENST00000513296 BIVM-ERCC5R4GMW8 1640 aa38.18■■■■□ 3.7
NKD2-203ENST00000513296 TOP2BQ02880 1626 aa38.17■■■■□ 3.7
NKD2-203ENST00000513296 FHAD1B1AJZ9 1412 aa38.15■■■■□ 3.7
NKD2-203ENST00000513296 SHROOM2Q13796 1616 aa38.14■■■■□ 3.7
NKD2-203ENST00000513296 ERICH3Q5RHP9 1530 aa38.06■■■■□ 3.68
NKD2-203ENST00000513296 PRG4Q92954 1404 aaPredicted RBP37.93■■■■□ 3.66
NKD2-203ENST00000513296 KIF13AQ9H1H9 1805 aa37.89■■■■□ 3.66
NKD2-203ENST00000513296 JPH4Q96JJ6 628 aa37.88■■■■□ 3.65
Retrieved 100 of 20,778 RNA–protein pairs in 177.2 ms