RNA–Protein interactions for RNA: ENST00000513222.1

CCHCR1-230, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-230ENST00000513222 NISCHQ9Y2I1 1504 aa48.36■■■■■ 5.33
CCHCR1-230ENST00000513222 CCDC180Q9P1Z9 1646 aa43.26■■■■■ 4.52
CCHCR1-230ENST00000513222 ABCC9O60706 1549 aa42.52■■■■■ 4.4
CCHCR1-230ENST00000513222 RB1CC1Q8TDY2 1594 aa40.85■■■■■ 4.13
CCHCR1-230ENST00000513222 NACADO15069 1562 aa40.76■■■■■ 4.12
CCHCR1-230ENST00000513222 MYO15BQ96JP2 1530 aa40.5■■■■■ 4.07
CCHCR1-230ENST00000513222 DCAF8L2P0C7V8 631 aa40.25■■■■■ 4.03
CCHCR1-230ENST00000513222 ZCCHC6Q5VYS8 1495 aaKnown RBP40.19■■■■■ 4.02
CCHCR1-230ENST00000513222 DCAF1Q9Y4B6 1507 aa40.11■■■■■ 4.01
CCHCR1-230ENST00000513222 UNC13AQ9UPW8 1703 aa40■■■■□ 3.99
CCHCR1-230ENST00000513222 BICRAQ9NZM4 1560 aa39.7■■■■□ 3.95
CCHCR1-230ENST00000513222 PABPN1Q86U42 306 aaKnown RBP eCLIP39.61■■■■□ 3.93
CCHCR1-230ENST00000513222 DNAJC5BQ9UF47 199 aa39.54■■■■□ 3.92
CCHCR1-230ENST00000513222 SHROOM4Q9ULL8 1493 aa39.31■■■■□ 3.88
CCHCR1-230ENST00000513222 SCRIBQ14160 1630 aa39.22■■■■□ 3.87
CCHCR1-230ENST00000513222 EIF4G1Q04637 1599 aaKnown RBP38.62■■■■□ 3.77
CCHCR1-230ENST00000513222 CC2D2AQ9P2K1 1620 aa38.56■■■■□ 3.76
CCHCR1-230ENST00000513222 CECR2Q9BXF3 1484 aa38.32■■■■□ 3.72
CCHCR1-230ENST00000513222 NCAPD3P42695 1498 aa37.63■■■■□ 3.61
CCHCR1-230ENST00000513222 SMARCA4P51532 1647 aa37.6■■■■□ 3.61
CCHCR1-230ENST00000513222 ATAD2BQ9ULI0 1458 aa37.51■■■■□ 3.59
CCHCR1-230ENST00000513222 BAZ1AQ9NRL2 1556 aaPredicted RBP37.49■■■■□ 3.59
CCHCR1-230ENST00000513222 SMARCA2P51531 1590 aa37.46■■■■□ 3.59
CCHCR1-230ENST00000513222 HMGXB3Q12766 1538 aa37.38■■■■□ 3.57
CCHCR1-230ENST00000513222 PEG3Q9GZU2 1588 aa37.37■■■■□ 3.57
CCHCR1-230ENST00000513222 MROH2BQ7Z745 1585 aa37.21■■■■□ 3.55
CCHCR1-230ENST00000513222 BAZ1BQ9UIG0 1483 aaKnown RBP37.1■■■■□ 3.53
CCHCR1-230ENST00000513222 WIZO95785 1651 aa36.77■■■■□ 3.48
CCHCR1-230ENST00000513222 NESP48681 1621 aa36.71■■■■□ 3.47
CCHCR1-230ENST00000513222 LAMC3Q9Y6N6 1575 aa36.67■■■■□ 3.46
CCHCR1-230ENST00000513222 ERCC6Q03468 1493 aa36.66■■■■□ 3.46
CCHCR1-230ENST00000513222 RSF1Q96T23 1441 aaPredicted RBP36.64■■■■□ 3.46
CCHCR1-230ENST00000513222 CUX2O14529 1486 aa36.62■■■■□ 3.45
CCHCR1-230ENST00000513222 CADPSQ9ULU8 1353 aa36.43■■■■□ 3.42
CCHCR1-230ENST00000513222 TOP2AP11388 1531 aaKnown RBP36.39■■■■□ 3.42
CCHCR1-230ENST00000513222 PDS5BQ9NTI5 1447 aa36.38■■■■□ 3.41
CCHCR1-230ENST00000513222 THOC2Q8NI27 1593 aaKnown RBP36.35■■■■□ 3.41
CCHCR1-230ENST00000513222 KIF21AQ7Z4S6 1674 aa36.32■■■■□ 3.41
CCHCR1-230ENST00000513222 CFTRP13569 1480 aa36.17■■■■□ 3.38
CCHCR1-230ENST00000513222 MRC2Q9UBG0 1479 aa36.02■■■■□ 3.36
CCHCR1-230ENST00000513222 DNAJC5Q9H3Z4 198 aa36.01■■■■□ 3.36
CCHCR1-230ENST00000513222 WDR62O43379 1518 aa35.98■■■■□ 3.35
CCHCR1-230ENST00000513222 FANCD2Q9BXW9 1451 aa35.96■■■■□ 3.35
CCHCR1-230ENST00000513222 CEP164Q9UPV0 1460 aa35.95■■■■□ 3.35
CCHCR1-230ENST00000513222 CCDC88BA6NC98 1476 aa35.94■■■■□ 3.34
CCHCR1-230ENST00000513222 PRDM2Q13029 1718 aa35.91■■■■□ 3.34
CCHCR1-230ENST00000513222 URB2Q14146 1524 aaKnown RBP35.67■■■■□ 3.3
CCHCR1-230ENST00000513222 ABCC8Q09428 1581 aa35.41■■■■□ 3.26
CCHCR1-230ENST00000513222 TOPBP1Q92547 1522 aa35.37■■■■□ 3.25
CCHCR1-230ENST00000513222 DNMBPQ6XZF7 1577 aa35.3■■■■□ 3.24
CCHCR1-230ENST00000513222 IFT140Q96RY7 1462 aa35.26■■■■□ 3.23
CCHCR1-230ENST00000513222 SUPT5HO00267 1087 aaKnown RBP35.11■■■■□ 3.21
CCHCR1-230ENST00000513222 ZNF608Q9ULD9 1512 aaPredicted RBP35.1■■■■□ 3.21
CCHCR1-230ENST00000513222 TARBP1Q13395 1621 aaKnown RBP35.09■■■■□ 3.21
CCHCR1-230ENST00000513222 POLA1P09884 1462 aaPredicted RBP35.03■■■■□ 3.2
CCHCR1-230ENST00000513222 EIF4G3O43432 1585 aaKnown RBP34.96■■■■□ 3.19
CCHCR1-230ENST00000513222 OSCARQ8IYS5 282 aa34.94■■■■□ 3.18
CCHCR1-230ENST00000513222 CUX1P39880 1505 aa34.94■■■■□ 3.18
CCHCR1-230ENST00000513222 SOGA1O94964 1423 aa34.85■■■■□ 3.17
CCHCR1-230ENST00000513222 WDR97A6NE52 1622 aa34.84■■■■□ 3.17
CCHCR1-230ENST00000513222 FGD5Q6ZNL6 1462 aa34.84■■■■□ 3.17
CCHCR1-230ENST00000513222 AQRO60306 1485 aaKnown RBP eCLIP34.82■■■■□ 3.162e-10■■■■■ 47.9
CCHCR1-230ENST00000513222 RAD54L2Q9Y4B4 1467 aa34.82■■■■□ 3.16
CCHCR1-230ENST00000513222 TDRD9Q8NDG6 1382 aaKnown RBP34.67■■■■□ 3.14
CCHCR1-230ENST00000513222 CHD1O14646 1710 aa34.62■■■■□ 3.13
CCHCR1-230ENST00000513222 BIVM-ERCC5R4GMW8 1640 aa34.59■■■■□ 3.13
CCHCR1-230ENST00000513222 ABCA10Q8WWZ4 1543 aa34.57■■■■□ 3.12
CCHCR1-230ENST00000513222 TOP2BQ02880 1626 aa34.55■■■■□ 3.12
CCHCR1-230ENST00000513222 GRIN2BQ13224 1484 aa34.52■■■■□ 3.12
CCHCR1-230ENST00000513222 MAGI1Q96QZ7 1491 aaPredicted RBP34.52■■■■□ 3.12
CCHCR1-230ENST00000513222 WRNQ14191 1432 aaPredicted RBP eCLIP34.5■■■■□ 3.11
CCHCR1-230ENST00000513222 ABCA5Q8WWZ7 1642 aa34.48■■■■□ 3.11
CCHCR1-230ENST00000513222 SNAPC4Q5SXM2 1469 aa34.48■■■■□ 3.11
CCHCR1-230ENST00000513222 SYNJ1O43426 1573 aa34.46■■■■□ 3.11
CCHCR1-230ENST00000513222 GAPVD1Q14C86 1478 aa34.46■■■■□ 3.11
CCHCR1-230ENST00000513222 RIMBP3CA6NJZ7 1639 aa34.45■■■■□ 3.11
CCHCR1-230ENST00000513222 RIMBP3BA6NNM3 1639 aa34.45■■■■□ 3.11
CCHCR1-230ENST00000513222 RIMBP3Q9UFD9 1639 aa34.45■■■■□ 3.11
CCHCR1-230ENST00000513222 PBRM1Q86U86 1689 aa34.44■■■■□ 3.1
CCHCR1-230ENST00000513222 ARHGEF11O15085 1522 aa34.39■■■■□ 3.1
CCHCR1-230ENST00000513222 SYNJ2O15056 1496 aa34.37■■■■□ 3.09
CCHCR1-230ENST00000513222 TRIM41Q8WV44 630 aa34.35■■■■□ 3.09
CCHCR1-230ENST00000513222 FBLN2P98095 1184 aa34.33■■■■□ 3.09
CCHCR1-230ENST00000513222 CLASP1Q7Z460 1538 aa34.29■■■■□ 3.08
CCHCR1-230ENST00000513222 CHMP7Q8WUX9 453 aaPredicted RBP34.28■■■■□ 3.08
CCHCR1-230ENST00000513222 ERICH3Q5RHP9 1530 aa34.15■■■■□ 3.06
CCHCR1-230ENST00000513222 ADAMTS12P58397 1594 aa34.13■■■■□ 3.05
CCHCR1-230ENST00000513222 GRIN2AQ12879 1464 aa34.08■■■■□ 3.05
CCHCR1-230ENST00000513222 ARAP1Q96P48 1450 aa34.07■■■■□ 3.05
CCHCR1-230ENST00000513222 FHAD1B1AJZ9 1412 aa34.06■■■■□ 3.04
CCHCR1-230ENST00000513222 NUP160Q12769 1436 aa34.01■■■■□ 3.03
CCHCR1-230ENST00000513222 CYB5RLQ6IPT4 315 aa34■■■■□ 3.03
CCHCR1-230ENST00000513222 CEP170Q5SW79 1584 aa33.94■■■■□ 3.02
CCHCR1-230ENST00000513222 SHROOM2Q13796 1616 aa33.85■■■■□ 3.01
CCHCR1-230ENST00000513222 KIF27Q86VH2 1401 aa33.83■■■■□ 3.01
CCHCR1-230ENST00000513222 IGF1RP08069 1367 aa33.8■■■■□ 3
CCHCR1-230ENST00000513222 CUL7Q14999 1698 aa33.74■■■□□ 2.99
CCHCR1-230ENST00000513222 ERCC6L2Q5T890 1561 aa33.7■■■□□ 2.99
CCHCR1-230ENST00000513222 RUSC2Q8N2Y8 1516 aa33.64■■■□□ 2.98
CCHCR1-230ENST00000513222 JPH4Q96JJ6 628 aa33.58■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms