RNA–Protein interactions for RNA: ENST00000513178.1

CNGA1-206, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

TSL 3

Gene CNGA1, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-206ENST00000513178 NISCHQ9Y2I1 1504 aa39.19■■■■□ 3.86
CNGA1-206ENST00000513178 CCDC180Q9P1Z9 1646 aa34.88■■■■□ 3.17
CNGA1-206ENST00000513178 ABCC9O60706 1549 aa33.97■■■■□ 3.03
CNGA1-206ENST00000513178 RB1CC1Q8TDY2 1594 aa32.72■■■□□ 2.83
CNGA1-206ENST00000513178 ZCCHC6Q5VYS8 1495 aaKnown RBP32.7■■■□□ 2.83
CNGA1-206ENST00000513178 NACADO15069 1562 aa32.67■■■□□ 2.82
CNGA1-206ENST00000513178 DCAF8L2P0C7V8 631 aa32.65■■■□□ 2.82
CNGA1-206ENST00000513178 MYO15BQ96JP2 1530 aa32.46■■■□□ 2.79
CNGA1-206ENST00000513178 DCAF1Q9Y4B6 1507 aa32.39■■■□□ 2.78
CNGA1-206ENST00000513178 UNC13AQ9UPW8 1703 aa32.14■■■□□ 2.74
CNGA1-206ENST00000513178 SCRIBQ14160 1630 aa31.88■■■□□ 2.69
CNGA1-206ENST00000513178 BICRAQ9NZM4 1560 aa31.74■■■□□ 2.67
CNGA1-206ENST00000513178 PABPN1Q86U42 306 aaKnown RBP eCLIP31.7■■■□□ 2.67
CNGA1-206ENST00000513178 SHROOM4Q9ULL8 1493 aa31.34■■■□□ 2.61
CNGA1-206ENST00000513178 DNAJC5BQ9UF47 199 aa30.95■■■□□ 2.55
CNGA1-206ENST00000513178 EIF4G1Q04637 1599 aaKnown RBP30.9■■■□□ 2.54
CNGA1-206ENST00000513178 CC2D2AQ9P2K1 1620 aa30.76■■■□□ 2.51
CNGA1-206ENST00000513178 CECR2Q9BXF3 1484 aa30.53■■■□□ 2.48
CNGA1-206ENST00000513178 SMARCA4P51532 1647 aa30.46■■■□□ 2.47
CNGA1-206ENST00000513178 BAZ1AQ9NRL2 1556 aaPredicted RBP30.38■■■□□ 2.45
CNGA1-206ENST00000513178 MROH2BQ7Z745 1585 aa30.24■■■□□ 2.43
CNGA1-206ENST00000513178 SMARCA2P51531 1590 aa30.17■■■□□ 2.42
CNGA1-206ENST00000513178 ATAD2BQ9ULI0 1458 aa30.17■■■□□ 2.42
CNGA1-206ENST00000513178 PEG3Q9GZU2 1588 aa30.09■■■□□ 2.41
CNGA1-206ENST00000513178 NCAPD3P42695 1498 aa30.08■■■□□ 2.41
CNGA1-206ENST00000513178 HMGXB3Q12766 1538 aa30.04■■■□□ 2.4
CNGA1-206ENST00000513178 WIZO95785 1651 aa29.98■■■□□ 2.39
CNGA1-206ENST00000513178 BAZ1BQ9UIG0 1483 aaKnown RBP29.98■■■□□ 2.39
CNGA1-206ENST00000513178 RSF1Q96T23 1441 aaPredicted RBP29.88■■■□□ 2.37
CNGA1-206ENST00000513178 TOP2AP11388 1531 aaKnown RBP29.63■■■□□ 2.33
CNGA1-206ENST00000513178 NESP48681 1621 aa29.44■■■□□ 2.3
CNGA1-206ENST00000513178 LAMC3Q9Y6N6 1575 aa29.36■■■□□ 2.29
CNGA1-206ENST00000513178 ERCC6Q03468 1493 aa29.27■■■□□ 2.28
CNGA1-206ENST00000513178 CCDC88BA6NC98 1476 aa29.23■■■□□ 2.27
CNGA1-206ENST00000513178 SUPT5HO00267 1087 aaKnown RBP29.22■■■□□ 2.27
CNGA1-206ENST00000513178 CADPSQ9ULU8 1353 aa29.22■■■□□ 2.27
CNGA1-206ENST00000513178 KIF21AQ7Z4S6 1674 aa29.2■■■□□ 2.26
CNGA1-206ENST00000513178 PRDM2Q13029 1718 aa29.11■■■□□ 2.25
CNGA1-206ENST00000513178 CFTRP13569 1480 aa29.1■■■□□ 2.25
CNGA1-206ENST00000513178 PDS5BQ9NTI5 1447 aa29.09■■■□□ 2.25
CNGA1-206ENST00000513178 THOC2Q8NI27 1593 aaKnown RBP29.02■■■□□ 2.24
CNGA1-206ENST00000513178 FANCD2Q9BXW9 1451 aa28.96■■■□□ 2.23
CNGA1-206ENST00000513178 CEP164Q9UPV0 1460 aa28.93■■■□□ 2.22
CNGA1-206ENST00000513178 CUX2O14529 1486 aa28.86■■■□□ 2.21
CNGA1-206ENST00000513178 MRC2Q9UBG0 1479 aa28.85■■■□□ 2.21
CNGA1-206ENST00000513178 WDR62O43379 1518 aa28.78■■■□□ 2.2
CNGA1-206ENST00000513178 URB2Q14146 1524 aaKnown RBP28.68■■■□□ 2.18
CNGA1-206ENST00000513178 DNMBPQ6XZF7 1577 aa28.53■■■□□ 2.16
CNGA1-206ENST00000513178 TOPBP1Q92547 1522 aa28.52■■■□□ 2.16
CNGA1-206ENST00000513178 ABCC8Q09428 1581 aa28.45■■■□□ 2.14
CNGA1-206ENST00000513178 CUX1P39880 1505 aa28.37■■■□□ 2.13
CNGA1-206ENST00000513178 POLA1P09884 1462 aaPredicted RBP28.28■■■□□ 2.12
CNGA1-206ENST00000513178 IFT140Q96RY7 1462 aa28.27■■■□□ 2.12
CNGA1-206ENST00000513178 FGD5Q6ZNL6 1462 aa28.25■■■□□ 2.11
CNGA1-206ENST00000513178 TARBP1Q13395 1621 aaKnown RBP28.24■■■□□ 2.11
CNGA1-206ENST00000513178 SYNJ1O43426 1573 aa28.2■■■□□ 2.11
CNGA1-206ENST00000513178 BIVM-ERCC5R4GMW8 1640 aa28.2■■■□□ 2.1
CNGA1-206ENST00000513178 WRNQ14191 1432 aaPredicted RBP eCLIP28.18■■■□□ 2.1
CNGA1-206ENST00000513178 ZNF608Q9ULD9 1512 aaPredicted RBP28.18■■■□□ 2.1
CNGA1-206ENST00000513178 TOP2BQ02880 1626 aa28.17■■■□□ 2.1
CNGA1-206ENST00000513178 RAD54L2Q9Y4B4 1467 aa28.16■■■□□ 2.1
CNGA1-206ENST00000513178 EIF4G3O43432 1585 aaKnown RBP28.16■■■□□ 2.1
CNGA1-206ENST00000513178 SOGA1O94964 1423 aa28.11■■■□□ 2.09
CNGA1-206ENST00000513178 WDR97A6NE52 1622 aa28.1■■■□□ 2.09
CNGA1-206ENST00000513178 AQRO60306 1485 aaKnown RBP eCLIP28■■■□□ 2.07
CNGA1-206ENST00000513178 TDRD9Q8NDG6 1382 aaKnown RBP27.95■■■□□ 2.06
CNGA1-206ENST00000513178 ABCA10Q8WWZ4 1543 aa27.94■■■□□ 2.06
CNGA1-206ENST00000513178 PBRM1Q86U86 1689 aa27.92■■■□□ 2.06
CNGA1-206ENST00000513178 ABCA5Q8WWZ7 1642 aa27.91■■■□□ 2.06
CNGA1-206ENST00000513178 CHD1O14646 1710 aa27.83■■■□□ 2.05
CNGA1-206ENST00000513178 GAPVD1Q14C86 1478 aa27.83■■■□□ 2.04
CNGA1-206ENST00000513178 GRIN2BQ13224 1484 aa27.8■■■□□ 2.04
CNGA1-206ENST00000513178 SNAPC4Q5SXM2 1469 aa27.8■■■□□ 2.04
CNGA1-206ENST00000513178 DNAJC5Q9H3Z4 198 aa27.73■■■□□ 2.03
CNGA1-206ENST00000513178 MAGI1Q96QZ7 1491 aaPredicted RBP27.72■■■□□ 2.03
CNGA1-206ENST00000513178 ADAMTS12P58397 1594 aa27.65■■■□□ 2.02
CNGA1-206ENST00000513178 FBLN2P98095 1184 aa27.63■■■□□ 2.01
CNGA1-206ENST00000513178 ERICH3Q5RHP9 1530 aa27.62■■■□□ 2.01
CNGA1-206ENST00000513178 SYNJ2O15056 1496 aa27.61■■■□□ 2.01
CNGA1-206ENST00000513178 OSCARQ8IYS5 282 aa27.6■■■□□ 2.01
CNGA1-206ENST00000513178 KIF27Q86VH2 1401 aa27.57■■■□□ 2
CNGA1-206ENST00000513178 TRIM41Q8WV44 630 aa27.55■■■□□ 2
CNGA1-206ENST00000513178 CHMP7Q8WUX9 453 aaPredicted RBP27.53■■■□□ 2
CNGA1-206ENST00000513178 FHAD1B1AJZ9 1412 aa27.49■■□□□ 1.99
CNGA1-206ENST00000513178 GRIN2AQ12879 1464 aa27.47■■□□□ 1.99
CNGA1-206ENST00000513178 CUL7Q14999 1698 aa27.46■■□□□ 1.99
CNGA1-206ENST00000513178 CLASP1Q7Z460 1538 aa27.41■■□□□ 1.98
CNGA1-206ENST00000513178 RUSC2Q8N2Y8 1516 aa27.41■■□□□ 1.98
CNGA1-206ENST00000513178 IGF1RP08069 1367 aa27.39■■□□□ 1.98
CNGA1-206ENST00000513178 CEP170Q5SW79 1584 aa27.38■■□□□ 1.97
CNGA1-206ENST00000513178 RIMBP3CA6NJZ7 1639 aa27.33■■□□□ 1.97
CNGA1-206ENST00000513178 RIMBP3BA6NNM3 1639 aa27.33■■□□□ 1.97
CNGA1-206ENST00000513178 RIMBP3Q9UFD9 1639 aa27.33■■□□□ 1.97
CNGA1-206ENST00000513178 NUP160Q12769 1436 aa27.31■■□□□ 1.96
CNGA1-206ENST00000513178 CHIC1Q5VXU3 224 aa27.29■■□□□ 1.96
CNGA1-206ENST00000513178 ARHGEF11O15085 1522 aa27.29■■□□□ 1.96
CNGA1-206ENST00000513178 CARMIL1Q5VZK9 1371 aa27.26■■□□□ 1.95
CNGA1-206ENST00000513178 SHROOM2Q13796 1616 aa27.16■■□□□ 1.94
CNGA1-206ENST00000513178 RAPGEF2Q9Y4G8 1499 aa27.14■■□□□ 1.94
CNGA1-206ENST00000513178 EEA1Q15075 1411 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms