RNA–Protein interactions for RNA: ENST00000513040.5

GRAMD2B-212, Transcript of GRAM domain containing 2B, humanhuman

TSL 2 BASIC

Gene GRAMD2B, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-212ENST00000513040 NISCHQ9Y2I1 1504 aa17.34■□□□□ 0.37
GRAMD2B-212ENST00000513040 CCDC180Q9P1Z9 1646 aa14.98□□□□□ -0.01
GRAMD2B-212ENST00000513040 ZCCHC6Q5VYS8 1495 aaKnown RBP14.58□□□□□ -0.07
GRAMD2B-212ENST00000513040 DCAF8L2P0C7V8 631 aa14.46□□□□□ -0.09
GRAMD2B-212ENST00000513040 SHROOM4Q9ULL8 1493 aa14.36□□□□□ -0.11
GRAMD2B-212ENST00000513040 DCAF1Q9Y4B6 1507 aa14.29□□□□□ -0.12
GRAMD2B-212ENST00000513040 ABCC9O60706 1549 aa14.22□□□□□ -0.13
GRAMD2B-212ENST00000513040 MYO15BQ96JP2 1530 aa14.08□□□□□ -0.16
GRAMD2B-212ENST00000513040 NACADO15069 1562 aa13.98□□□□□ -0.17
GRAMD2B-212ENST00000513040 SCRIBQ14160 1630 aa13.9□□□□□ -0.18
GRAMD2B-212ENST00000513040 SUPT5HO00267 1087 aaKnown RBP13.89□□□□□ -0.19
GRAMD2B-212ENST00000513040 RB1CC1Q8TDY2 1594 aa13.85□□□□□ -0.19
GRAMD2B-212ENST00000513040 RSF1Q96T23 1441 aaPredicted RBP13.53□□□□□ -0.24
GRAMD2B-212ENST00000513040 CECR2Q9BXF3 1484 aa13.52□□□□□ -0.25
GRAMD2B-212ENST00000513040 PABPN1Q86U42 306 aaKnown RBP eCLIP13.49□□□□□ -0.25
GRAMD2B-212ENST00000513040 UNC13AQ9UPW8 1703 aa13.49□□□□□ -0.25
GRAMD2B-212ENST00000513040 MROH2BQ7Z745 1585 aa13.43□□□□□ -0.26
GRAMD2B-212ENST00000513040 BICRAQ9NZM4 1560 aa13.42□□□□□ -0.26
GRAMD2B-212ENST00000513040 BAZ1AQ9NRL2 1556 aaPredicted RBP13.38□□□□□ -0.27
GRAMD2B-212ENST00000513040 WIZO95785 1651 aa13.3□□□□□ -0.28
GRAMD2B-212ENST00000513040 CHIC1Q5VXU3 224 aa13.3□□□□□ -0.28
GRAMD2B-212ENST00000513040 SMARCA4P51532 1647 aa13.29□□□□□ -0.28
GRAMD2B-212ENST00000513040 HRCP23327 699 aa13.16□□□□□ -0.3
GRAMD2B-212ENST00000513040 TOP2AP11388 1531 aaKnown RBP13.15□□□□□ -0.3
GRAMD2B-212ENST00000513040 PEG3Q9GZU2 1588 aa13.1□□□□□ -0.31
GRAMD2B-212ENST00000513040 ATAD2BQ9ULI0 1458 aa13.08□□□□□ -0.31
GRAMD2B-212ENST00000513040 CCDC88BA6NC98 1476 aa13.07□□□□□ -0.32
GRAMD2B-212ENST00000513040 SMARCA2P51531 1590 aa13.05□□□□□ -0.32
GRAMD2B-212ENST00000513040 EIF4G1Q04637 1599 aaKnown RBP13.03□□□□□ -0.32
GRAMD2B-212ENST00000513040 BAZ1BQ9UIG0 1483 aaKnown RBP13.03□□□□□ -0.32
GRAMD2B-212ENST00000513040 TRIM41Q8WV44 630 aa13.02□□□□□ -0.33
GRAMD2B-212ENST00000513040 NCAPD3P42695 1498 aa12.94□□□□□ -0.34
GRAMD2B-212ENST00000513040 HMGXB3Q12766 1538 aa12.89□□□□□ -0.35
GRAMD2B-212ENST00000513040 PCGF6Q9BYE7 350 aa12.89□□□□□ -0.35
GRAMD2B-212ENST00000513040 LOC105371045A0A1W2PR82 267 aa12.84□□□□□ -0.35
GRAMD2B-212ENST00000513040 ABCC8Q09428 1581 aa12.83□□□□□ -0.36
GRAMD2B-212ENST00000513040 FAM9AQ8IZU1 332 aaPredicted RBP12.83□□□□□ -0.36
GRAMD2B-212ENST00000513040 CC2D2AQ9P2K1 1620 aa12.81□□□□□ -0.36
GRAMD2B-212ENST00000513040 PPARGC1BQ86YN6 1023 aaKnown RBP12.76□□□□□ -0.37
GRAMD2B-212ENST00000513040 WRNQ14191 1432 aaPredicted RBP eCLIP12.75□□□□□ -0.37
GRAMD2B-212ENST00000513040 EHMT2Q96KQ7 1210 aa12.69□□□□□ -0.38
GRAMD2B-212ENST00000513040 CFTRP13569 1480 aa12.69□□□□□ -0.38
GRAMD2B-212ENST00000513040 SYNJ1O43426 1573 aa12.65□□□□□ -0.38
GRAMD2B-212ENST00000513040 CADPSQ9ULU8 1353 aa12.65□□□□□ -0.38
GRAMD2B-212ENST00000513040 SOGA1O94964 1423 aa12.65□□□□□ -0.39
GRAMD2B-212ENST00000513040 TRIM26Q12899 539 aaPredicted RBP12.64□□□□□ -0.39
GRAMD2B-212ENST00000513040 EEA1Q15075 1411 aa12.59□□□□□ -0.39
GRAMD2B-212ENST00000513040 RUSC2Q8N2Y8 1516 aa12.58□□□□□ -0.4
GRAMD2B-212ENST00000513040 CSRNP3Q8WYN3 585 aa12.57□□□□□ -0.4
GRAMD2B-212ENST00000513040 TOP2BQ02880 1626 aa12.57□□□□□ -0.4
GRAMD2B-212ENST00000513040 DNAJC5BQ9UF47 199 aa12.56□□□□□ -0.4
GRAMD2B-212ENST00000513040 CUX1P39880 1505 aa12.54□□□□□ -0.4
GRAMD2B-212ENST00000513040 ZEB1P37275 1124 aaPredicted RBP12.52□□□□□ -0.4
GRAMD2B-212ENST00000513040 BIVM-ERCC5R4GMW8 1640 aa12.52□□□□□ -0.41
GRAMD2B-212ENST00000513040 NESP48681 1621 aa12.51□□□□□ -0.41
GRAMD2B-212ENST00000513040 FANCD2Q9BXW9 1451 aa12.51□□□□□ -0.41
GRAMD2B-212ENST00000513040 PRDM2Q13029 1718 aa12.49□□□□□ -0.41
GRAMD2B-212ENST00000513040 UBTFP17480 764 aaKnown RBP12.46□□□□□ -0.41
GRAMD2B-212ENST00000513040 LAMC3Q9Y6N6 1575 aa12.45□□□□□ -0.42
GRAMD2B-212ENST00000513040 GOLGA3Q08378 1498 aa12.43□□□□□ -0.42
GRAMD2B-212ENST00000513040 TNIKQ9UKE5 1360 aa12.43□□□□□ -0.42
GRAMD2B-212ENST00000513040 CEP164Q9UPV0 1460 aa12.42□□□□□ -0.42
GRAMD2B-212ENST00000513040 PELP1Q8IZL8 1130 aaKnown RBP12.42□□□□□ -0.42
GRAMD2B-212ENST00000513040 KIF27Q86VH2 1401 aa12.41□□□□□ -0.42
GRAMD2B-212ENST00000513040 PDS5BQ9NTI5 1447 aa12.41□□□□□ -0.42
GRAMD2B-212ENST00000513040 FGD5Q6ZNL6 1462 aa12.4□□□□□ -0.42
GRAMD2B-212ENST00000513040 CEP162Q5TB80 1403 aa12.38□□□□□ -0.43
GRAMD2B-212ENST00000513040 KIF21BO75037 1637 aa12.38□□□□□ -0.43
GRAMD2B-212ENST00000513040 RAPGEF2Q9Y4G8 1499 aa12.37□□□□□ -0.43
GRAMD2B-212ENST00000513040 DNMBPQ6XZF7 1577 aa12.37□□□□□ -0.43
GRAMD2B-212ENST00000513040 TOPBP1Q92547 1522 aa12.37□□□□□ -0.43
GRAMD2B-212ENST00000513040 CUX2O14529 1486 aa12.36□□□□□ -0.43
GRAMD2B-212ENST00000513040 PRXQ9BXM0 1461 aa12.33□□□□□ -0.44
GRAMD2B-212ENST00000513040 URB2Q14146 1524 aaKnown RBP12.33□□□□□ -0.44
GRAMD2B-212ENST00000513040 POLA1P09884 1462 aaPredicted RBP12.32□□□□□ -0.44
GRAMD2B-212ENST00000513040 RAD54L2Q9Y4B4 1467 aa12.31□□□□□ -0.44
GRAMD2B-212ENST00000513040 IGF1RP08069 1367 aa12.3□□□□□ -0.44
GRAMD2B-212ENST00000513040 ERICH3Q5RHP9 1530 aa12.29□□□□□ -0.44
GRAMD2B-212ENST00000513040 RANGAP1P46060 587 aaPredicted RBP12.29□□□□□ -0.44
GRAMD2B-212ENST00000513040 KIF21AQ7Z4S6 1674 aa12.28□□□□□ -0.44
GRAMD2B-212ENST00000513040 SCAF1Q9H7N4 1312 aaKnown RBP12.27□□□□□ -0.44
GRAMD2B-212ENST00000513040 ABCA10Q8WWZ4 1543 aa12.27□□□□□ -0.44
GRAMD2B-212ENST00000513040 CLIP1P30622 1438 aa12.27□□□□□ -0.45
GRAMD2B-212ENST00000513040 CARMIL1Q5VZK9 1371 aa12.25□□□□□ -0.45
GRAMD2B-212ENST00000513040 MRC2Q9UBG0 1479 aa12.22□□□□□ -0.45
GRAMD2B-212ENST00000513040 TDRD9Q8NDG6 1382 aaKnown RBP12.21□□□□□ -0.46
GRAMD2B-212ENST00000513040 ERCC6Q03468 1493 aa12.19□□□□□ -0.46
GRAMD2B-212ENST00000513040 TTBK1Q5TCY1 1321 aaPredicted RBP12.16□□□□□ -0.46
GRAMD2B-212ENST00000513040 VPS8Q8N3P4 1428 aa12.16□□□□□ -0.46
GRAMD2B-212ENST00000513040 GAPVD1Q14C86 1478 aa12.16□□□□□ -0.46
GRAMD2B-212ENST00000513040 WDR97A6NE52 1622 aa12.15□□□□□ -0.46
GRAMD2B-212ENST00000513040 TARBP1Q13395 1621 aaKnown RBP12.13□□□□□ -0.47
GRAMD2B-212ENST00000513040 ABCA5Q8WWZ7 1642 aa12.13□□□□□ -0.47
GRAMD2B-212ENST00000513040 WDR62O43379 1518 aa12.13□□□□□ -0.47
GRAMD2B-212ENST00000513040 APLP2Q06481 763 aa12.12□□□□□ -0.47
GRAMD2B-212ENST00000513040 CUL7Q14999 1698 aa12.11□□□□□ -0.47
GRAMD2B-212ENST00000513040 ARAP1Q96P48 1450 aa12.11□□□□□ -0.47
GRAMD2B-212ENST00000513040 AQRO60306 1485 aaKnown RBP eCLIP12.1□□□□□ -0.47
GRAMD2B-212ENST00000513040 IFT140Q96RY7 1462 aa12.1□□□□□ -0.47
GRAMD2B-212ENST00000513040 ARHGAP35Q9NRY4 1499 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms