RNA–Protein interactions for RNA: ENST00000512993.1

SLIT2-211, Transcript of slit guidance ligand 2, humanhuman

TSL 5

Gene SLIT2, Length 394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT2-211ENST00000512993 NISCHQ9Y2I1 1504 aa28.89■■■□□ 2.22
SLIT2-211ENST00000512993 CCDC180Q9P1Z9 1646 aa25.67■■□□□ 1.7
SLIT2-211ENST00000512993 ABCC9O60706 1549 aa25.32■■□□□ 1.64
SLIT2-211ENST00000512993 RB1CC1Q8TDY2 1594 aa24.29■■□□□ 1.48
SLIT2-211ENST00000512993 NACADO15069 1562 aa24.26■■□□□ 1.47
SLIT2-211ENST00000512993 DCAF8L2P0C7V8 631 aa24.25■■□□□ 1.47
SLIT2-211ENST00000512993 MYO15BQ96JP2 1530 aa24.11■■□□□ 1.45
SLIT2-211ENST00000512993 ZCCHC6Q5VYS8 1495 aaKnown RBP24■■□□□ 1.43
SLIT2-211ENST00000512993 DCAF1Q9Y4B6 1507 aa23.93■■□□□ 1.42
SLIT2-211ENST00000512993 PABPN1Q86U42 306 aaKnown RBP eCLIP23.71■■□□□ 1.39
SLIT2-211ENST00000512993 UNC13AQ9UPW8 1703 aa23.64■■□□□ 1.38
SLIT2-211ENST00000512993 BICRAQ9NZM4 1560 aa23.57■■□□□ 1.36
SLIT2-211ENST00000512993 DNAJC5BQ9UF47 199 aa23.52■■□□□ 1.36
SLIT2-211ENST00000512993 SCRIBQ14160 1630 aa23.38■■□□□ 1.33
SLIT2-211ENST00000512993 SHROOM4Q9ULL8 1493 aa23.34■■□□□ 1.33
SLIT2-211ENST00000512993 EIF4G1Q04637 1599 aaKnown RBP22.95■■□□□ 1.26
SLIT2-211ENST00000512993 CC2D2AQ9P2K1 1620 aa22.89■■□□□ 1.25
SLIT2-211ENST00000512993 CECR2Q9BXF3 1484 aa22.8■■□□□ 1.24
SLIT2-211ENST00000512993 AEBP2Q6ZN18 517 aaPredicted RBP22.8■■□□□ 1.24
SLIT2-211ENST00000512993 CHIC1Q5VXU3 224 aa22.46■■□□□ 1.19
SLIT2-211ENST00000512993 NCAPD3P42695 1498 aa22.45■■□□□ 1.18
SLIT2-211ENST00000512993 SMARCA4P51532 1647 aa22.39■■□□□ 1.18
SLIT2-211ENST00000512993 ATAD2BQ9ULI0 1458 aa22.39■■□□□ 1.17
SLIT2-211ENST00000512993 BAZ1AQ9NRL2 1556 aaPredicted RBP22.38■■□□□ 1.17
SLIT2-211ENST00000512993 SMARCA2P51531 1590 aa22.32■■□□□ 1.16
SLIT2-211ENST00000512993 MROH2BQ7Z745 1585 aa22.24■■□□□ 1.15
SLIT2-211ENST00000512993 PEG3Q9GZU2 1588 aa22.24■■□□□ 1.15
SLIT2-211ENST00000512993 HMGXB3Q12766 1538 aa22.23■■□□□ 1.15
SLIT2-211ENST00000512993 BAZ1BQ9UIG0 1483 aaKnown RBP22.15■■□□□ 1.14
SLIT2-211ENST00000512993 RSF1Q96T23 1441 aaPredicted RBP21.98■■□□□ 1.11
SLIT2-211ENST00000512993 WIZO95785 1651 aa21.95■■□□□ 1.1
SLIT2-211ENST00000512993 NESP48681 1621 aa21.87■■□□□ 1.09
SLIT2-211ENST00000512993 ERCC6Q03468 1493 aa21.83■■□□□ 1.09
SLIT2-211ENST00000512993 LAMC3Q9Y6N6 1575 aa21.8■■□□□ 1.08
SLIT2-211ENST00000512993 CADPSQ9ULU8 1353 aa21.78■■□□□ 1.08
SLIT2-211ENST00000512993 TOP2AP11388 1531 aaKnown RBP21.72■■□□□ 1.07
SLIT2-211ENST00000512993 PDS5BQ9NTI5 1447 aa21.72■■□□□ 1.07
SLIT2-211ENST00000512993 CUX2O14529 1486 aa21.71■■□□□ 1.07
SLIT2-211ENST00000512993 CFTRP13569 1480 aa21.59■■□□□ 1.05
SLIT2-211ENST00000512993 CCDC88BA6NC98 1476 aa21.53■■□□□ 1.04
SLIT2-211ENST00000512993 THOC2Q8NI27 1593 aaKnown RBP21.53■■□□□ 1.04
SLIT2-211ENST00000512993 KIF21AQ7Z4S6 1674 aa21.52■■□□□ 1.04
SLIT2-211ENST00000512993 FANCD2Q9BXW9 1451 aa21.46■■□□□ 1.03
SLIT2-211ENST00000512993 MRC2Q9UBG0 1479 aa21.45■■□□□ 1.02
SLIT2-211ENST00000512993 CEP164Q9UPV0 1460 aa21.43■■□□□ 1.02
SLIT2-211ENST00000512993 WDR62O43379 1518 aa21.38■■□□□ 1.01
SLIT2-211ENST00000512993 DNAJC5Q9H3Z4 198 aa21.35■■□□□ 1.01
SLIT2-211ENST00000512993 SUPT5HO00267 1087 aaKnown RBP21.28■■□□□ 1
SLIT2-211ENST00000512993 URB2Q14146 1524 aaKnown RBP21.25■□□□□ 0.99
SLIT2-211ENST00000512993 PRDM2Q13029 1718 aa21.24■□□□□ 0.99
SLIT2-211ENST00000512993 ABCC8Q09428 1581 aa21.14■□□□□ 0.98
SLIT2-211ENST00000512993 TOPBP1Q92547 1522 aa21.09■□□□□ 0.97
SLIT2-211ENST00000512993 IFT140Q96RY7 1462 aa21.03■□□□□ 0.96
SLIT2-211ENST00000512993 DNMBPQ6XZF7 1577 aa21.02■□□□□ 0.96
SLIT2-211ENST00000512993 ZNF608Q9ULD9 1512 aaPredicted RBP20.92■□□□□ 0.94
SLIT2-211ENST00000512993 POLA1P09884 1462 aaPredicted RBP20.91■□□□□ 0.94
SLIT2-211ENST00000512993 OSCARQ8IYS5 282 aa20.88■□□□□ 0.93
SLIT2-211ENST00000512993 SOGA1O94964 1423 aa20.87■□□□□ 0.93
SLIT2-211ENST00000512993 CUX1P39880 1505 aa20.86■□□□□ 0.93
SLIT2-211ENST00000512993 TARBP1Q13395 1621 aaKnown RBP20.86■□□□□ 0.93
SLIT2-211ENST00000512993 RAD54L2Q9Y4B4 1467 aa20.82■□□□□ 0.92
SLIT2-211ENST00000512993 AQRO60306 1485 aaKnown RBP eCLIP20.81■□□□□ 0.92
SLIT2-211ENST00000512993 FGD5Q6ZNL6 1462 aa20.81■□□□□ 0.92
SLIT2-211ENST00000512993 TDRD9Q8NDG6 1382 aaKnown RBP20.76■□□□□ 0.91
SLIT2-211ENST00000512993 EIF4G3O43432 1585 aaKnown RBP20.76■□□□□ 0.91
SLIT2-211ENST00000512993 WRNQ14191 1432 aaPredicted RBP eCLIP20.7■□□□□ 0.9
SLIT2-211ENST00000512993 WDR97A6NE52 1622 aa20.7■□□□□ 0.9
SLIT2-211ENST00000512993 ABCA10Q8WWZ4 1543 aa20.64■□□□□ 0.9
SLIT2-211ENST00000512993 TOP2BQ02880 1626 aa20.64■□□□□ 0.89
SLIT2-211ENST00000512993 GRIN2BQ13224 1484 aa20.62■□□□□ 0.89
SLIT2-211ENST00000512993 FBLN2P98095 1184 aa20.6■□□□□ 0.89
SLIT2-211ENST00000512993 GAPVD1Q14C86 1478 aa20.6■□□□□ 0.89
SLIT2-211ENST00000512993 BIVM-ERCC5R4GMW8 1640 aa20.6■□□□□ 0.89
SLIT2-211ENST00000512993 SYNJ1O43426 1573 aa20.59■□□□□ 0.89
SLIT2-211ENST00000512993 MAGI1Q96QZ7 1491 aaPredicted RBP20.57■□□□□ 0.88
SLIT2-211ENST00000512993 CHMP7Q8WUX9 453 aaPredicted RBP20.57■□□□□ 0.88
SLIT2-211ENST00000512993 SNAPC4Q5SXM2 1469 aa20.56■□□□□ 0.88
SLIT2-211ENST00000512993 ABCA5Q8WWZ7 1642 aa20.5■□□□□ 0.87
SLIT2-211ENST00000512993 CHD1O14646 1710 aa20.5■□□□□ 0.87
SLIT2-211ENST00000512993 SYNJ2O15056 1496 aa20.5■□□□□ 0.87
SLIT2-211ENST00000512993 TRIM41Q8WV44 630 aa20.46■□□□□ 0.87
SLIT2-211ENST00000512993 PBRM1Q86U86 1689 aa20.43■□□□□ 0.86
SLIT2-211ENST00000512993 ARHGEF11O15085 1522 aa20.41■□□□□ 0.86
SLIT2-211ENST00000512993 RIMBP3CA6NJZ7 1639 aa20.4■□□□□ 0.86
SLIT2-211ENST00000512993 RIMBP3BA6NNM3 1639 aa20.4■□□□□ 0.86
SLIT2-211ENST00000512993 RIMBP3Q9UFD9 1639 aa20.4■□□□□ 0.86
SLIT2-211ENST00000512993 ERICH3Q5RHP9 1530 aa20.38■□□□□ 0.85
SLIT2-211ENST00000512993 FHAD1B1AJZ9 1412 aa20.37■□□□□ 0.85
SLIT2-211ENST00000512993 CLASP1Q7Z460 1538 aa20.36■□□□□ 0.85
SLIT2-211ENST00000512993 GRIN2AQ12879 1464 aa20.33■□□□□ 0.85
SLIT2-211ENST00000512993 CYB5RLQ6IPT4 315 aa20.32■□□□□ 0.84
SLIT2-211ENST00000512993 ADAMTS12P58397 1594 aa20.3■□□□□ 0.84
SLIT2-211ENST00000512993 KIF27Q86VH2 1401 aa20.3■□□□□ 0.84
SLIT2-211ENST00000512993 IGF1RP08069 1367 aa20.3■□□□□ 0.84
SLIT2-211ENST00000512993 NUP160Q12769 1436 aa20.28■□□□□ 0.84
SLIT2-211ENST00000512993 ARAP1Q96P48 1450 aa20.24■□□□□ 0.83
SLIT2-211ENST00000512993 CEP170Q5SW79 1584 aa20.2■□□□□ 0.82
SLIT2-211ENST00000512993 JPH4Q96JJ6 628 aa20.15■□□□□ 0.82
SLIT2-211ENST00000512993 CARMIL1Q5VZK9 1371 aa20.14■□□□□ 0.81
SLIT2-211ENST00000512993 CUL7Q14999 1698 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms