RNA–Protein interactions for RNA: ENST00000512977.1

KLHL3-212, Transcript of kelch like family member 3, humanhuman

TSL 4

Gene KLHL3, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-212ENST00000512977 NISCHQ9Y2I1 1504 aa15.48■□□□□ 0.07
KLHL3-212ENST00000512977 DNAJC5BQ9UF47 199 aa13.84□□□□□ -0.19
KLHL3-212ENST00000512977 ABCC9O60706 1549 aa13.79□□□□□ -0.2
KLHL3-212ENST00000512977 CCDC180Q9P1Z9 1646 aa13.75□□□□□ -0.21
KLHL3-212ENST00000512977 DNAJC5Q9H3Z4 198 aa13.16□□□□□ -0.3
KLHL3-212ENST00000512977 DCAF8L2P0C7V8 631 aa13.15□□□□□ -0.3
KLHL3-212ENST00000512977 RB1CC1Q8TDY2 1594 aa13.03□□□□□ -0.32
KLHL3-212ENST00000512977 NACADO15069 1562 aa12.97□□□□□ -0.33
KLHL3-212ENST00000512977 ZCCHC6Q5VYS8 1495 aaKnown RBP12.86□□□□□ -0.35
KLHL3-212ENST00000512977 PABPN1Q86U42 306 aaKnown RBP eCLIP12.82□□□□□ -0.36
KLHL3-212ENST00000512977 MYO15BQ96JP2 1530 aa12.78□□□□□ -0.36
KLHL3-212ENST00000512977 UNC13AQ9UPW8 1703 aa12.74□□□□□ -0.37
KLHL3-212ENST00000512977 DCAF1Q9Y4B6 1507 aa12.72□□□□□ -0.37
KLHL3-212ENST00000512977 SCRIBQ14160 1630 aa12.66□□□□□ -0.38
KLHL3-212ENST00000512977 BICRAQ9NZM4 1560 aa12.65□□□□□ -0.38
KLHL3-212ENST00000512977 CC2D2AQ9P2K1 1620 aa12.47□□□□□ -0.41
KLHL3-212ENST00000512977 CECR2Q9BXF3 1484 aa12.46□□□□□ -0.41
KLHL3-212ENST00000512977 AEBP2Q6ZN18 517 aaPredicted RBP12.44□□□□□ -0.42
KLHL3-212ENST00000512977 SHROOM4Q9ULL8 1493 aa12.41□□□□□ -0.42
KLHL3-212ENST00000512977 EIF4G1Q04637 1599 aaKnown RBP12.34□□□□□ -0.43
KLHL3-212ENST00000512977 TRIM41Q8WV44 630 aa12.17□□□□□ -0.46
KLHL3-212ENST00000512977 CUX2O14529 1486 aa12.14□□□□□ -0.47
KLHL3-212ENST00000512977 CHIC1Q5VXU3 224 aa12.04□□□□□ -0.48
KLHL3-212ENST00000512977 SMARCA4P51532 1647 aa12.04□□□□□ -0.48
KLHL3-212ENST00000512977 ATAD2BQ9ULI0 1458 aa12□□□□□ -0.49
KLHL3-212ENST00000512977 BAZ1AQ9NRL2 1556 aaPredicted RBP12□□□□□ -0.49
KLHL3-212ENST00000512977 NCAPD3P42695 1498 aa11.97□□□□□ -0.49
KLHL3-212ENST00000512977 MROH2BQ7Z745 1585 aa11.96□□□□□ -0.49
KLHL3-212ENST00000512977 SMARCA2P51531 1590 aa11.96□□□□□ -0.5
KLHL3-212ENST00000512977 BAZ1BQ9UIG0 1483 aaKnown RBP11.92□□□□□ -0.5
KLHL3-212ENST00000512977 HMGXB3Q12766 1538 aa11.9□□□□□ -0.5
KLHL3-212ENST00000512977 ERCC6Q03468 1493 aa11.86□□□□□ -0.51
KLHL3-212ENST00000512977 PEG3Q9GZU2 1588 aa11.85□□□□□ -0.51
KLHL3-212ENST00000512977 WIZO95785 1651 aa11.84□□□□□ -0.51
KLHL3-212ENST00000512977 NESP48681 1621 aa11.82□□□□□ -0.52
KLHL3-212ENST00000512977 RSF1Q96T23 1441 aaPredicted RBP11.78□□□□□ -0.52
KLHL3-212ENST00000512977 THOC2Q8NI27 1593 aaKnown RBP11.75□□□□□ -0.53
KLHL3-212ENST00000512977 LAMC3Q9Y6N6 1575 aa11.67□□□□□ -0.54
KLHL3-212ENST00000512977 TOP2AP11388 1531 aaKnown RBP11.67□□□□□ -0.54
KLHL3-212ENST00000512977 CADPSQ9ULU8 1353 aa11.66□□□□□ -0.54
KLHL3-212ENST00000512977 PDS5BQ9NTI5 1447 aa11.65□□□□□ -0.54
KLHL3-212ENST00000512977 KIF21AQ7Z4S6 1674 aa11.63□□□□□ -0.55
KLHL3-212ENST00000512977 CCDC88BA6NC98 1476 aa11.57□□□□□ -0.56
KLHL3-212ENST00000512977 RIMBP3CA6NJZ7 1639 aa11.55□□□□□ -0.56
KLHL3-212ENST00000512977 RIMBP3BA6NNM3 1639 aa11.55□□□□□ -0.56
KLHL3-212ENST00000512977 RIMBP3Q9UFD9 1639 aa11.55□□□□□ -0.56
KLHL3-212ENST00000512977 FANCD2Q9BXW9 1451 aa11.55□□□□□ -0.56
KLHL3-212ENST00000512977 SUPT5HO00267 1087 aaKnown RBP11.54□□□□□ -0.56
KLHL3-212ENST00000512977 CFTRP13569 1480 aa11.54□□□□□ -0.56
KLHL3-212ENST00000512977 CEP164Q9UPV0 1460 aa11.54□□□□□ -0.56
KLHL3-212ENST00000512977 MRC2Q9UBG0 1479 aa11.53□□□□□ -0.56
KLHL3-212ENST00000512977 WDR62O43379 1518 aa11.46□□□□□ -0.57
KLHL3-212ENST00000512977 URB2Q14146 1524 aaKnown RBP11.44□□□□□ -0.58
KLHL3-212ENST00000512977 OSCARQ8IYS5 282 aa11.43□□□□□ -0.58
KLHL3-212ENST00000512977 PRDM2Q13029 1718 aa11.41□□□□□ -0.58
KLHL3-212ENST00000512977 ILDR1Q86SU0 546 aaPredicted RBP11.41□□□□□ -0.58
KLHL3-212ENST00000512977 ARHGEF11O15085 1522 aa11.35□□□□□ -0.59
KLHL3-212ENST00000512977 TOPBP1Q92547 1522 aa11.34□□□□□ -0.59
KLHL3-212ENST00000512977 DNMBPQ6XZF7 1577 aa11.3□□□□□ -0.6
KLHL3-212ENST00000512977 TRHP20396 242 aaPredicted RBP11.3□□□□□ -0.6
KLHL3-212ENST00000512977 ZNF608Q9ULD9 1512 aaPredicted RBP11.29□□□□□ -0.6
KLHL3-212ENST00000512977 ABCC8Q09428 1581 aa11.28□□□□□ -0.6
KLHL3-212ENST00000512977 IFT140Q96RY7 1462 aa11.27□□□□□ -0.6
KLHL3-212ENST00000512977 RAD54L2Q9Y4B4 1467 aa11.24□□□□□ -0.61
KLHL3-212ENST00000512977 CYB5RLQ6IPT4 315 aa11.23□□□□□ -0.61
KLHL3-212ENST00000512977 POLA1P09884 1462 aaPredicted RBP11.23□□□□□ -0.61
KLHL3-212ENST00000512977 CUX1P39880 1505 aa11.23□□□□□ -0.61
KLHL3-212ENST00000512977 AQRO60306 1485 aaKnown RBP eCLIP11.22□□□□□ -0.61
KLHL3-212ENST00000512977 FBLN2P98095 1184 aa11.22□□□□□ -0.61
KLHL3-212ENST00000512977 FGD5Q6ZNL6 1462 aa11.21□□□□□ -0.61
KLHL3-212ENST00000512977 ARAP1Q96P48 1450 aa11.21□□□□□ -0.61
KLHL3-212ENST00000512977 SOGA1O94964 1423 aa11.21□□□□□ -0.61
KLHL3-212ENST00000512977 TARBP1Q13395 1621 aaKnown RBP11.2□□□□□ -0.62
KLHL3-212ENST00000512977 EIF4G3O43432 1585 aaKnown RBP11.2□□□□□ -0.62
KLHL3-212ENST00000512977 TDRD9Q8NDG6 1382 aaKnown RBP11.19□□□□□ -0.62
KLHL3-212ENST00000512977 WRNQ14191 1432 aaPredicted RBP eCLIP11.11□□□□□ -0.63
KLHL3-212ENST00000512977 CHMP7Q8WUX9 453 aaPredicted RBP11.11□□□□□ -0.63
KLHL3-212ENST00000512977 SYNJ1O43426 1573 aa11.11□□□□□ -0.63
KLHL3-212ENST00000512977 SNAPC4Q5SXM2 1469 aa11.1□□□□□ -0.63
KLHL3-212ENST00000512977 CHD1O14646 1710 aa11.09□□□□□ -0.63
KLHL3-212ENST00000512977 GRIN2BQ13224 1484 aa11.06□□□□□ -0.64
KLHL3-212ENST00000512977 GAPVD1Q14C86 1478 aa11.06□□□□□ -0.64
KLHL3-212ENST00000512977 WDR97A6NE52 1622 aa11.06□□□□□ -0.64
KLHL3-212ENST00000512977 TOP2BQ02880 1626 aa11.06□□□□□ -0.64
KLHL3-212ENST00000512977 BIVM-ERCC5R4GMW8 1640 aa11.06□□□□□ -0.64
KLHL3-212ENST00000512977 ABCA10Q8WWZ4 1543 aa11.05□□□□□ -0.64
KLHL3-212ENST00000512977 PBRM1Q86U86 1689 aa11.03□□□□□ -0.64
KLHL3-212ENST00000512977 MAGI1Q96QZ7 1491 aaPredicted RBP11.02□□□□□ -0.65
KLHL3-212ENST00000512977 ABCA5Q8WWZ7 1642 aa11.02□□□□□ -0.65
KLHL3-212ENST00000512977 SYNJ2O15056 1496 aa11□□□□□ -0.65
KLHL3-212ENST00000512977 ADAMTS12P58397 1594 aa10.94□□□□□ -0.66
KLHL3-212ENST00000512977 CLASP1Q7Z460 1538 aa10.94□□□□□ -0.66
KLHL3-212ENST00000512977 KDM4FA0A1W2PPD8 638 aa10.93□□□□□ -0.66
KLHL3-212ENST00000512977 GRIN2AQ12879 1464 aa10.93□□□□□ -0.66
KLHL3-212ENST00000512977 FHAD1B1AJZ9 1412 aa10.92□□□□□ -0.66
KLHL3-212ENST00000512977 KIF13AQ9H1H9 1805 aa10.91□□□□□ -0.66
KLHL3-212ENST00000512977 ERICH3Q5RHP9 1530 aa10.91□□□□□ -0.66
KLHL3-212ENST00000512977 KIF27Q86VH2 1401 aa10.89□□□□□ -0.67
KLHL3-212ENST00000512977 CEP170Q5SW79 1584 aa10.89□□□□□ -0.67
KLHL3-212ENST00000512977 IGF1RP08069 1367 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms