RNA–Protein interactions for RNA: ENST00000512510.5

APBB2-223, Transcript of amyloid beta precursor protein binding family B member 2, human

TSL 5

Gene APBB2, Length 539 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB2-223	ENST00000512510	NISCH	Q9Y2I1	1504 aa		39.25	■■■■□ 3.87
APBB2-223	ENST00000512510	ABCC9	O60706	1549 aa		35.93	■■■■□ 3.34
APBB2-223	ENST00000512510	CCDC180	Q9P1Z9	1646 aa		35.3	■■■■□ 3.24
APBB2-223	ENST00000512510	DNAJC5B	Q9UF47	199 aa		34.23	■■■■□ 3.07
APBB2-223	ENST00000512510	RB1CC1	Q8TDY2	1594 aa		33.92	■■■■□ 3.02
APBB2-223	ENST00000512510	NACAD	O15069	1562 aa		33.59	■■■□□ 2.97
APBB2-223	ENST00000512510	DCAF8L2	P0C7V8	631 aa		33.51	■■■□□ 2.95
APBB2-223	ENST00000512510	PABPN1	Q86U42	306 aa	Known RBP eCLIP	33.47	■■■□□ 2.95
APBB2-223	ENST00000512510	UNC13A	Q9UPW8	1703 aa		33.02	■■■□□ 2.88
APBB2-223	ENST00000512510	MYO15B	Q96JP2	1530 aa		32.96	■■■□□ 2.87
APBB2-223	ENST00000512510	BICRA	Q9NZM4	1560 aa		32.95	■■■□□ 2.86
APBB2-223	ENST00000512510	SHROOM4	Q9ULL8	1493 aa		32.44	■■■□□ 2.78
APBB2-223	ENST00000512510	CECR2	Q9BXF3	1484 aa		32.42	■■■□□ 2.78
APBB2-223	ENST00000512510	ZCCHC6	Q5VYS8	1495 aa	Known RBP	32.39	■■■□□ 2.78
APBB2-223	ENST00000512510	CC2D2A	Q9P2K1	1620 aa		32.37	■■■□□ 2.77
APBB2-223	ENST00000512510	DCAF1	Q9Y4B6	1507 aa		32.36	■■■□□ 2.77
APBB2-223	ENST00000512510	SCRIB	Q14160	1630 aa		32.21	■■■□□ 2.75
APBB2-223	ENST00000512510	EIF4G1	Q04637	1599 aa	Known RBP	32.19	■■■□□ 2.74
APBB2-223	ENST00000512510	DNAJC5	Q9H3Z4	198 aa		31.79	■■■□□ 2.68
APBB2-223	ENST00000512510	CUX2	O14529	1486 aa		31.14	■■■□□ 2.57
APBB2-223	ENST00000512510	NCAPD3	P42695	1498 aa		31.07	■■■□□ 2.56
APBB2-223	ENST00000512510	ERCC6	Q03468	1493 aa		31.06	■■■□□ 2.56
APBB2-223	ENST00000512510	ATAD2B	Q9ULI0	1458 aa		30.9	■■■□□ 2.54
APBB2-223	ENST00000512510	SMARCA2	P51531	1590 aa		30.74	■■■□□ 2.51
APBB2-223	ENST00000512510	NES	P48681	1621 aa		30.72	■■■□□ 2.51
APBB2-223	ENST00000512510	HMGXB3	Q12766	1538 aa		30.71	■■■□□ 2.51
APBB2-223	ENST00000512510	SMARCA4	P51532	1647 aa		30.66	■■■□□ 2.5
APBB2-223	ENST00000512510	BAZ1B	Q9UIG0	1483 aa	Known RBP	30.55	■■■□□ 2.48
APBB2-223	ENST00000512510	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	30.47	■■■□□ 2.47
APBB2-223	ENST00000512510	THOC2	Q8NI27	1593 aa	Known RBP	30.41	■■■□□ 2.46
APBB2-223	ENST00000512510	PEG3	Q9GZU2	1588 aa		30.37	■■■□□ 2.45
APBB2-223	ENST00000512510	LAMC3	Q9Y6N6	1575 aa		30.37	■■■□□ 2.45
APBB2-223	ENST00000512510	PDS5B	Q9NTI5	1447 aa		30.3	■■■□□ 2.44
APBB2-223	ENST00000512510	MROH2B	Q7Z745	1585 aa		30.24	■■■□□ 2.43
APBB2-223	ENST00000512510	TRIM41	Q8WV44	630 aa		30.2	■■■□□ 2.43
APBB2-223	ENST00000512510	KIF21A	Q7Z4S6	1674 aa		30.18	■■■□□ 2.42
APBB2-223	ENST00000512510	CADPS	Q9ULU8	1353 aa		30.14	■■■□□ 2.41
APBB2-223	ENST00000512510	MRC2	Q9UBG0	1479 aa		30.02	■■■□□ 2.4
APBB2-223	ENST00000512510	WDR62	O43379	1518 aa		29.92	■■■□□ 2.38
APBB2-223	ENST00000512510	CEP164	Q9UPV0	1460 aa		29.8	■■■□□ 2.36
APBB2-223	ENST00000512510	WIZ	O95785	1651 aa		29.8	■■■□□ 2.36
APBB2-223	ENST00000512510	OSCAR	Q8IYS5	282 aa		29.76	■■■□□ 2.35
APBB2-223	ENST00000512510	FANCD2	Q9BXW9	1451 aa		29.74	■■■□□ 2.35
APBB2-223	ENST00000512510	CFTR	P13569	1480 aa		29.65	■■■□□ 2.34
APBB2-223	ENST00000512510	URB2	Q14146	1524 aa	Known RBP	29.52	■■■□□ 2.32
APBB2-223	ENST00000512510	RSF1	Q96T23	1441 aa	Predicted RBP	29.48	■■■□□ 2.31
APBB2-223	ENST00000512510	TOP2A	P11388	1531 aa	Known RBP	29.4	■■■□□ 2.3
APBB2-223	ENST00000512510	RIMBP3C	A6NJZ7	1639 aa		29.26	■■■□□ 2.27
APBB2-223	ENST00000512510	RIMBP3B	A6NNM3	1639 aa		29.26	■■■□□ 2.27
APBB2-223	ENST00000512510	RIMBP3	Q9UFD9	1639 aa		29.26	■■■□□ 2.27
APBB2-223	ENST00000512510	ZNF608	Q9ULD9	1512 aa	Predicted RBP	29.25	■■■□□ 2.27
APBB2-223	ENST00000512510	IFT140	Q96RY7	1462 aa		29.25	■■■□□ 2.27
APBB2-223	ENST00000512510	ARHGEF11	O15085	1522 aa		29.15	■■■□□ 2.26
APBB2-223	ENST00000512510	CCDC88B	A6NC98	1476 aa		29.15	■■■□□ 2.26
APBB2-223	ENST00000512510	TOPBP1	Q92547	1522 aa		29.11	■■■□□ 2.25
APBB2-223	ENST00000512510	CYB5RL	Q6IPT4	315 aa		29.11	■■■□□ 2.25
APBB2-223	ENST00000512510	PRDM2	Q13029	1718 aa		29.1	■■■□□ 2.25
APBB2-223	ENST00000512510	ABCC8	Q09428	1581 aa		29.04	■■■□□ 2.24
APBB2-223	ENST00000512510	AQR	O60306	1485 aa	Known RBP eCLIP	28.97	■■■□□ 2.23
APBB2-223	ENST00000512510	EIF4G3	O43432	1585 aa	Known RBP	28.96	■■■□□ 2.23
APBB2-223	ENST00000512510	TRH	P20396	242 aa	Predicted RBP	28.94	■■■□□ 2.22
APBB2-223	ENST00000512510	FBLN2	P98095	1184 aa		28.94	■■■□□ 2.22
APBB2-223	ENST00000512510	DNMBP	Q6XZF7	1577 aa		28.92	■■■□□ 2.22
APBB2-223	ENST00000512510	ARAP1	Q96P48	1450 aa		28.85	■■■□□ 2.21
APBB2-223	ENST00000512510	TARBP1	Q13395	1621 aa	Known RBP	28.84	■■■□□ 2.21
APBB2-223	ENST00000512510	CHD1	O14646	1710 aa		28.82	■■■□□ 2.2
APBB2-223	ENST00000512510	POLA1	P09884	1462 aa	Predicted RBP	28.79	■■■□□ 2.2
APBB2-223	ENST00000512510	TDRD9	Q8NDG6	1382 aa	Known RBP	28.73	■■■□□ 2.19
APBB2-223	ENST00000512510	RAD54L2	Q9Y4B4	1467 aa		28.72	■■■□□ 2.19
APBB2-223	ENST00000512510	SOGA1	O94964	1423 aa		28.71	■■■□□ 2.19
APBB2-223	ENST00000512510	CHMP7	Q8WUX9	453 aa	Predicted RBP	28.64	■■■□□ 2.18
APBB2-223	ENST00000512510	SNAPC4	Q5SXM2	1469 aa		28.6	■■■□□ 2.17
APBB2-223	ENST00000512510	CLASP1	Q7Z460	1538 aa		28.53	■■■□□ 2.16
APBB2-223	ENST00000512510	FGD5	Q6ZNL6	1462 aa		28.53	■■■□□ 2.16
APBB2-223	ENST00000512510	MAGI1	Q96QZ7	1491 aa	Predicted RBP	28.5	■■■□□ 2.15
APBB2-223	ENST00000512510	WDR97	A6NE52	1622 aa		28.49	■■■□□ 2.15
APBB2-223	ENST00000512510	SYNJ1	O43426	1573 aa		28.49	■■■□□ 2.15
APBB2-223	ENST00000512510	GRIN2B	Q13224	1484 aa		28.48	■■■□□ 2.15
APBB2-223	ENST00000512510	AEBP2	Q6ZN18	517 aa	Predicted RBP	28.45	■■■□□ 2.14
APBB2-223	ENST00000512510	CUX1	P39880	1505 aa		28.43	■■■□□ 2.14
APBB2-223	ENST00000512510	SYNJ2	O15056	1496 aa		28.42	■■■□□ 2.14
APBB2-223	ENST00000512510	GAPVD1	Q14C86	1478 aa		28.33	■■■□□ 2.13
APBB2-223	ENST00000512510	ABCA10	Q8WWZ4	1543 aa		28.19	■■■□□ 2.1
APBB2-223	ENST00000512510	PBRM1	Q86U86	1689 aa		28.19	■■■□□ 2.1
APBB2-223	ENST00000512510	ABCA5	Q8WWZ7	1642 aa		28.12	■■■□□ 2.09
APBB2-223	ENST00000512510	GRIN2A	Q12879	1464 aa		28.08	■■■□□ 2.09
APBB2-223	ENST00000512510	ERCC6L2	Q5T890	1561 aa		28.08	■■■□□ 2.09
APBB2-223	ENST00000512510	NUP160	Q12769	1436 aa		28.02	■■■□□ 2.08
APBB2-223	ENST00000512510	WRN	Q14191	1432 aa	Predicted RBP eCLIP	28.02	■■■□□ 2.08
APBB2-223	ENST00000512510	CEP170	Q5SW79	1584 aa		28	■■■□□ 2.07
APBB2-223	ENST00000512510	ADAMTS12	P58397	1594 aa		27.95	■■■□□ 2.07
APBB2-223	ENST00000512510	FHAD1	B1AJZ9	1412 aa		27.95	■■■□□ 2.07
APBB2-223	ENST00000512510	SUPT5H	O00267	1087 aa	Known RBP	27.91	■■■□□ 2.06
APBB2-223	ENST00000512510	SHROOM2	Q13796	1616 aa		27.87	■■■□□ 2.05
APBB2-223	ENST00000512510	JPH4	Q96JJ6	628 aa		27.85	■■■□□ 2.05
APBB2-223	ENST00000512510	PRG4	Q92954	1404 aa	Predicted RBP	27.84	■■■□□ 2.05
APBB2-223	ENST00000512510	ERICH3	Q5RHP9	1530 aa		27.81	■■■□□ 2.04
APBB2-223	ENST00000512510	TOP2B	Q02880	1626 aa		27.81	■■■□□ 2.04
APBB2-223	ENST00000512510	BIVM-ERCC5	R4GMW8	1640 aa		27.78	■■■□□ 2.04
APBB2-223	ENST00000512510	FAM69C	Q0P6D2	419 aa		27.75	■■■□□ 2.03

Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms