RNA–Protein interactions for RNA: ENST00000512394.5

SNX2-211, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-211ENST00000512394 NISCHQ9Y2I1 1504 aa42.21■■■■■ 4.35
SNX2-211ENST00000512394 CCDC180Q9P1Z9 1646 aa37.85■■■■□ 3.65
SNX2-211ENST00000512394 ABCC9O60706 1549 aa37.44■■■■□ 3.58
SNX2-211ENST00000512394 RB1CC1Q8TDY2 1594 aa35.85■■■■□ 3.33
SNX2-211ENST00000512394 NACADO15069 1562 aa35.67■■■■□ 3.3
SNX2-211ENST00000512394 DCAF8L2P0C7V8 631 aa35.4■■■■□ 3.26
SNX2-211ENST00000512394 MYO15BQ96JP2 1530 aa35.27■■■■□ 3.24
SNX2-211ENST00000512394 ZCCHC6Q5VYS8 1495 aaKnown RBP35.07■■■■□ 3.2
SNX2-211ENST00000512394 UNC13AQ9UPW8 1703 aa35.06■■■■□ 3.2
SNX2-211ENST00000512394 DCAF1Q9Y4B6 1507 aa34.93■■■■□ 3.18
SNX2-211ENST00000512394 PABPN1Q86U42 306 aaKnown RBP eCLIP34.84■■■■□ 3.17
SNX2-211ENST00000512394 DNAJC5BQ9UF47 199 aa34.74■■■■□ 3.15
SNX2-211ENST00000512394 BICRAQ9NZM4 1560 aa34.74■■■■□ 3.15
SNX2-211ENST00000512394 SCRIBQ14160 1630 aa34.44■■■■□ 3.1
SNX2-211ENST00000512394 SHROOM4Q9ULL8 1493 aa34.39■■■■□ 3.1
SNX2-211ENST00000512394 EIF4G1Q04637 1599 aaKnown RBP33.89■■■■□ 3.02
SNX2-211ENST00000512394 CC2D2AQ9P2K1 1620 aa33.88■■■■□ 3.01
SNX2-211ENST00000512394 CECR2Q9BXF3 1484 aa33.71■■■□□ 2.99
SNX2-211ENST00000512394 SMARCA4P51532 1647 aa32.9■■■□□ 2.86
SNX2-211ENST00000512394 NCAPD3P42695 1498 aa32.86■■■□□ 2.85
SNX2-211ENST00000512394 ATAD2BQ9ULI0 1458 aa32.81■■■□□ 2.84
SNX2-211ENST00000512394 BAZ1AQ9NRL2 1556 aaPredicted RBP32.79■■■□□ 2.84
SNX2-211ENST00000512394 SMARCA2P51531 1590 aa32.79■■■□□ 2.84
SNX2-211ENST00000512394 HMGXB3Q12766 1538 aa32.72■■■□□ 2.83
SNX2-211ENST00000512394 PEG3Q9GZU2 1588 aa32.59■■■□□ 2.81
SNX2-211ENST00000512394 BAZ1BQ9UIG0 1483 aaKnown RBP32.54■■■□□ 2.8
SNX2-211ENST00000512394 MROH2BQ7Z745 1585 aa32.51■■■□□ 2.79
SNX2-211ENST00000512394 ERCC6Q03468 1493 aa32.35■■■□□ 2.77
SNX2-211ENST00000512394 NESP48681 1621 aa32.23■■■□□ 2.75
SNX2-211ENST00000512394 CUX2O14529 1486 aa32.2■■■□□ 2.75
SNX2-211ENST00000512394 WIZO95785 1651 aa32.17■■■□□ 2.74
SNX2-211ENST00000512394 LAMC3Q9Y6N6 1575 aa32.15■■■□□ 2.74
SNX2-211ENST00000512394 RSF1Q96T23 1441 aaPredicted RBP31.93■■■□□ 2.7
SNX2-211ENST00000512394 THOC2Q8NI27 1593 aaKnown RBP31.93■■■□□ 2.7
SNX2-211ENST00000512394 KIF21AQ7Z4S6 1674 aa31.92■■■□□ 2.7
SNX2-211ENST00000512394 PDS5BQ9NTI5 1447 aa31.91■■■□□ 2.7
SNX2-211ENST00000512394 CADPSQ9ULU8 1353 aa31.87■■■□□ 2.69
SNX2-211ENST00000512394 TOP2AP11388 1531 aaKnown RBP31.8■■■□□ 2.68
SNX2-211ENST00000512394 DNAJC5Q9H3Z4 198 aa31.74■■■□□ 2.67
SNX2-211ENST00000512394 MRC2Q9UBG0 1479 aa31.63■■■□□ 2.65
SNX2-211ENST00000512394 CFTRP13569 1480 aa31.59■■■□□ 2.65
SNX2-211ENST00000512394 CEP164Q9UPV0 1460 aa31.57■■■□□ 2.64
SNX2-211ENST00000512394 WDR62O43379 1518 aa31.55■■■□□ 2.64
SNX2-211ENST00000512394 FANCD2Q9BXW9 1451 aa31.54■■■□□ 2.64
SNX2-211ENST00000512394 PRDM2Q13029 1718 aa31.44■■■□□ 2.62
SNX2-211ENST00000512394 CCDC88BA6NC98 1476 aa31.38■■■□□ 2.61
SNX2-211ENST00000512394 URB2Q14146 1524 aaKnown RBP31.24■■■□□ 2.59
SNX2-211ENST00000512394 TOPBP1Q92547 1522 aa30.98■■■□□ 2.55
SNX2-211ENST00000512394 ABCC8Q09428 1581 aa30.96■■■□□ 2.55
SNX2-211ENST00000512394 DNMBPQ6XZF7 1577 aa30.92■■■□□ 2.54
SNX2-211ENST00000512394 IFT140Q96RY7 1462 aa30.92■■■□□ 2.54
SNX2-211ENST00000512394 ZNF608Q9ULD9 1512 aaPredicted RBP30.79■■■□□ 2.52
SNX2-211ENST00000512394 EIF4G3O43432 1585 aaKnown RBP30.72■■■□□ 2.51
SNX2-211ENST00000512394 TARBP1Q13395 1621 aaKnown RBP30.7■■■□□ 2.51
SNX2-211ENST00000512394 OSCARQ8IYS5 282 aa30.7■■■□□ 2.51
SNX2-211ENST00000512394 SUPT5HO00267 1087 aaKnown RBP30.68■■■□□ 2.5
SNX2-211ENST00000512394 POLA1P09884 1462 aaPredicted RBP30.67■■■□□ 2.5
SNX2-211ENST00000512394 CUX1P39880 1505 aa30.54■■■□□ 2.48
SNX2-211ENST00000512394 AQRO60306 1485 aaKnown RBP eCLIP30.54■■■□□ 2.486e-6■■■■□ 25.1
SNX2-211ENST00000512394 FGD5Q6ZNL6 1462 aa30.53■■■□□ 2.48
SNX2-211ENST00000512394 RAD54L2Q9Y4B4 1467 aa30.51■■■□□ 2.48
SNX2-211ENST00000512394 SOGA1O94964 1423 aa30.51■■■□□ 2.47
SNX2-211ENST00000512394 TRIM41Q8WV44 630 aa30.48■■■□□ 2.47
SNX2-211ENST00000512394 WDR97A6NE52 1622 aa30.47■■■□□ 2.47
SNX2-211ENST00000512394 CHD1O14646 1710 aa30.44■■■□□ 2.46
SNX2-211ENST00000512394 TDRD9Q8NDG6 1382 aaKnown RBP30.39■■■□□ 2.45
SNX2-211ENST00000512394 RIMBP3CA6NJZ7 1639 aa30.35■■■□□ 2.45
SNX2-211ENST00000512394 RIMBP3BA6NNM3 1639 aa30.35■■■□□ 2.45
SNX2-211ENST00000512394 RIMBP3Q9UFD9 1639 aa30.35■■■□□ 2.45
SNX2-211ENST00000512394 SNAPC4Q5SXM2 1469 aa30.29■■■□□ 2.44
SNX2-211ENST00000512394 ARHGEF11O15085 1522 aa30.27■■■□□ 2.44
SNX2-211ENST00000512394 FBLN2P98095 1184 aa30.26■■■□□ 2.43
SNX2-211ENST00000512394 GRIN2BQ13224 1484 aa30.25■■■□□ 2.43
SNX2-211ENST00000512394 MAGI1Q96QZ7 1491 aaPredicted RBP30.25■■■□□ 2.43
SNX2-211ENST00000512394 PBRM1Q86U86 1689 aa30.23■■■□□ 2.43
SNX2-211ENST00000512394 ABCA10Q8WWZ4 1543 aa30.21■■■□□ 2.43
SNX2-211ENST00000512394 BIVM-ERCC5R4GMW8 1640 aa30.19■■■□□ 2.42
SNX2-211ENST00000512394 GAPVD1Q14C86 1478 aa30.18■■■□□ 2.42
SNX2-211ENST00000512394 TOP2BQ02880 1626 aa30.18■■■□□ 2.42
SNX2-211ENST00000512394 ABCA5Q8WWZ7 1642 aa30.18■■■□□ 2.42
SNX2-211ENST00000512394 WRNQ14191 1432 aaPredicted RBP eCLIP30.14■■■□□ 2.42
SNX2-211ENST00000512394 SYNJ1O43426 1573 aa30.13■■■□□ 2.41
SNX2-211ENST00000512394 SYNJ2O15056 1496 aa30.12■■■□□ 2.41
SNX2-211ENST00000512394 CHMP7Q8WUX9 453 aaPredicted RBP30.11■■■□□ 2.41
SNX2-211ENST00000512394 CLASP1Q7Z460 1538 aa30.07■■■□□ 2.4
SNX2-211ENST00000512394 ARAP1Q96P48 1450 aa29.97■■■□□ 2.39
SNX2-211ENST00000512394 CYB5RLQ6IPT4 315 aa29.94■■■□□ 2.38
SNX2-211ENST00000512394 ADAMTS12P58397 1594 aa29.93■■■□□ 2.38
SNX2-211ENST00000512394 GRIN2AQ12879 1464 aa29.87■■■□□ 2.37
SNX2-211ENST00000512394 ERICH3Q5RHP9 1530 aa29.86■■■□□ 2.37
SNX2-211ENST00000512394 FHAD1B1AJZ9 1412 aa29.8■■■□□ 2.36
SNX2-211ENST00000512394 CEP170Q5SW79 1584 aa29.75■■■□□ 2.35
SNX2-211ENST00000512394 NUP160Q12769 1436 aa29.74■■■□□ 2.35
SNX2-211ENST00000512394 SHROOM2Q13796 1616 aa29.62■■■□□ 2.33
SNX2-211ENST00000512394 ERCC6L2Q5T890 1561 aa29.58■■■□□ 2.33
SNX2-211ENST00000512394 KIF27Q86VH2 1401 aa29.56■■■□□ 2.32
SNX2-211ENST00000512394 TRHP20396 242 aaPredicted RBP29.53■■■□□ 2.32
SNX2-211ENST00000512394 CUL7Q14999 1698 aa29.53■■■□□ 2.32
SNX2-211ENST00000512394 RUSC2Q8N2Y8 1516 aa29.5■■■□□ 2.31
SNX2-211ENST00000512394 IGF1RP08069 1367 aa29.45■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms