RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 NISCHQ9Y2I1 1504 aa38.63■■■■□ 3.77
DDX41-214ENST00000512334 CCDC180Q9P1Z9 1646 aa34.36■■■■□ 3.09
DDX41-214ENST00000512334 ABCC9O60706 1549 aa33.74■■■□□ 2.99
DDX41-214ENST00000512334 DCAF8L2P0C7V8 631 aa32.43■■■□□ 2.78
DDX41-214ENST00000512334 RB1CC1Q8TDY2 1594 aa32.41■■■□□ 2.78
DDX41-214ENST00000512334 NACADO15069 1562 aa32.32■■■□□ 2.77
DDX41-214ENST00000512334 ZCCHC6Q5VYS8 1495 aaKnown RBP32.16■■■□□ 2.74
DDX41-214ENST00000512334 MYO15BQ96JP2 1530 aa32.06■■■□□ 2.72
DDX41-214ENST00000512334 DCAF1Q9Y4B6 1507 aa31.91■■■□□ 2.7
DDX41-214ENST00000512334 UNC13AQ9UPW8 1703 aa31.66■■■□□ 2.66
DDX41-214ENST00000512334 PABPN1Q86U42 306 aaKnown RBP eCLIP31.54■■■□□ 2.645e-8■■■□□ 18.6
DDX41-214ENST00000512334 SCRIBQ14160 1630 aa31.42■■■□□ 2.62
DDX41-214ENST00000512334 BICRAQ9NZM4 1560 aa31.39■■■□□ 2.61
DDX41-214ENST00000512334 SHROOM4Q9ULL8 1493 aa31.03■■■□□ 2.56
DDX41-214ENST00000512334 DNAJC5BQ9UF47 199 aa30.98■■■□□ 2.55
DDX41-214ENST00000512334 EIF4G1Q04637 1599 aaKnown RBP30.6■■■□□ 2.49
DDX41-214ENST00000512334 CC2D2AQ9P2K1 1620 aa30.5■■■□□ 2.47
DDX41-214ENST00000512334 CECR2Q9BXF3 1484 aa30.31■■■□□ 2.44
DDX41-214ENST00000512334 SMARCA4P51532 1647 aa30■■■□□ 2.39
DDX41-214ENST00000512334 BAZ1AQ9NRL2 1556 aaPredicted RBP29.95■■■□□ 2.39
DDX41-214ENST00000512334 ATAD2BQ9ULI0 1458 aa29.85■■■□□ 2.37
DDX41-214ENST00000512334 SMARCA2P51531 1590 aa29.81■■■□□ 2.36
DDX41-214ENST00000512334 NCAPD3P42695 1498 aa29.81■■■□□ 2.36
DDX41-214ENST00000512334 MROH2BQ7Z745 1585 aa29.78■■■□□ 2.36
DDX41-214ENST00000512334 HMGXB3Q12766 1538 aa29.67■■■□□ 2.34
DDX41-214ENST00000512334 PEG3Q9GZU2 1588 aa29.66■■■□□ 2.34
DDX41-214ENST00000512334 BAZ1BQ9UIG0 1483 aaKnown RBP29.63■■■□□ 2.33
DDX41-214ENST00000512334 WIZO95785 1651 aa29.48■■■□□ 2.31
DDX41-214ENST00000512334 RSF1Q96T23 1441 aaPredicted RBP29.41■■■□□ 2.3
DDX41-214ENST00000512334 NESP48681 1621 aa29.17■■■□□ 2.26
DDX41-214ENST00000512334 TOP2AP11388 1531 aaKnown RBP29.14■■■□□ 2.25
DDX41-214ENST00000512334 ERCC6Q03468 1493 aa29.11■■■□□ 2.25
DDX41-214ENST00000512334 LAMC3Q9Y6N6 1575 aa29.06■■■□□ 2.24
DDX41-214ENST00000512334 CADPSQ9ULU8 1353 aa28.97■■■□□ 2.23
DDX41-214ENST00000512334 PDS5BQ9NTI5 1447 aa28.89■■■□□ 2.22
DDX41-214ENST00000512334 KIF21AQ7Z4S6 1674 aa28.83■■■□□ 2.21
DDX41-214ENST00000512334 CCDC88BA6NC98 1476 aa28.8■■■□□ 2.2
DDX41-214ENST00000512334 CUX2O14529 1486 aa28.77■■■□□ 2.2
DDX41-214ENST00000512334 CFTRP13569 1480 aa28.77■■■□□ 2.2
DDX41-214ENST00000512334 SUPT5HO00267 1087 aaKnown RBP28.72■■■□□ 2.19
DDX41-214ENST00000512334 THOC2Q8NI27 1593 aaKnown RBP28.71■■■□□ 2.19
DDX41-214ENST00000512334 FANCD2Q9BXW9 1451 aa28.66■■■□□ 2.18
DDX41-214ENST00000512334 CEP164Q9UPV0 1460 aa28.64■■■□□ 2.17
DDX41-214ENST00000512334 MRC2Q9UBG0 1479 aa28.59■■■□□ 2.17
DDX41-214ENST00000512334 PRDM2Q13029 1718 aa28.57■■■□□ 2.16
DDX41-214ENST00000512334 WDR62O43379 1518 aa28.48■■■□□ 2.15
DDX41-214ENST00000512334 URB2Q14146 1524 aaKnown RBP28.36■■■□□ 2.13
DDX41-214ENST00000512334 TOPBP1Q92547 1522 aa28.18■■■□□ 2.1
DDX41-214ENST00000512334 ABCC8Q09428 1581 aa28.16■■■□□ 2.1
DDX41-214ENST00000512334 DNMBPQ6XZF7 1577 aa28.15■■■□□ 2.1
DDX41-214ENST00000512334 IFT140Q96RY7 1462 aa28.02■■■□□ 2.08
DDX41-214ENST00000512334 DNAJC5Q9H3Z4 198 aa27.95■■■□□ 2.06
DDX41-214ENST00000512334 CUX1P39880 1505 aa27.95■■■□□ 2.06
DDX41-214ENST00000512334 POLA1P09884 1462 aaPredicted RBP27.94■■■□□ 2.06
DDX41-214ENST00000512334 ZNF608Q9ULD9 1512 aaPredicted RBP27.91■■■□□ 2.06
DDX41-214ENST00000512334 FGD5Q6ZNL6 1462 aa27.88■■■□□ 2.05
DDX41-214ENST00000512334 TARBP1Q13395 1621 aaKnown RBP27.86■■■□□ 2.05
DDX41-214ENST00000512334 SOGA1O94964 1423 aa27.84■■■□□ 2.05
DDX41-214ENST00000512334 RAD54L2Q9Y4B4 1467 aa27.83■■■□□ 2.05
DDX41-214ENST00000512334 EIF4G3O43432 1585 aaKnown RBP27.8■■■□□ 2.04
DDX41-214ENST00000512334 WRNQ14191 1432 aaPredicted RBP eCLIP27.76■■■□□ 2.04
DDX41-214ENST00000512334 AQRO60306 1485 aaKnown RBP eCLIP27.75■■■□□ 2.038e-8■□□□□ 10.8
DDX41-214ENST00000512334 TDRD9Q8NDG6 1382 aaKnown RBP27.7■■■□□ 2.02
DDX41-214ENST00000512334 SYNJ1O43426 1573 aa27.69■■■□□ 2.02
DDX41-214ENST00000512334 TOP2BQ02880 1626 aa27.68■■■□□ 2.02
DDX41-214ENST00000512334 BIVM-ERCC5R4GMW8 1640 aa27.68■■■□□ 2.02
DDX41-214ENST00000512334 WDR97A6NE52 1622 aa27.63■■■□□ 2.01
DDX41-214ENST00000512334 OSCARQ8IYS5 282 aa27.6■■■□□ 2.01
DDX41-214ENST00000512334 ABCA10Q8WWZ4 1543 aa27.57■■■□□ 2
DDX41-214ENST00000512334 GAPVD1Q14C86 1478 aa27.51■■■□□ 2
DDX41-214ENST00000512334 GRIN2BQ13224 1484 aa27.51■■□□□ 1.99
DDX41-214ENST00000512334 SNAPC4Q5SXM2 1469 aa27.51■■□□□ 1.99
DDX41-214ENST00000512334 FBLN2P98095 1184 aa27.5■■□□□ 1.99
DDX41-214ENST00000512334 CHD1O14646 1710 aa27.47■■□□□ 1.99
DDX41-214ENST00000512334 PBRM1Q86U86 1689 aa27.47■■□□□ 1.99
DDX41-214ENST00000512334 ABCA5Q8WWZ7 1642 aa27.47■■□□□ 1.99
DDX41-214ENST00000512334 MAGI1Q96QZ7 1491 aaPredicted RBP27.44■■□□□ 1.98
DDX41-214ENST00000512334 CHMP7Q8WUX9 453 aaPredicted RBP27.38■■□□□ 1.97
DDX41-214ENST00000512334 SYNJ2O15056 1496 aa27.33■■□□□ 1.97
DDX41-214ENST00000512334 ERICH3Q5RHP9 1530 aa27.25■■□□□ 1.95
DDX41-214ENST00000512334 ADAMTS12P58397 1594 aa27.23■■□□□ 1.95
DDX41-214ENST00000512334 KIF27Q86VH2 1401 aa27.19■■□□□ 1.94
DDX41-214ENST00000512334 FHAD1B1AJZ9 1412 aa27.18■■□□□ 1.94
DDX41-214ENST00000512334 GRIN2AQ12879 1464 aa27.16■■□□□ 1.94
DDX41-214ENST00000512334 RIMBP3CA6NJZ7 1639 aa27.15■■□□□ 1.94
DDX41-214ENST00000512334 RIMBP3BA6NNM3 1639 aa27.15■■□□□ 1.94
DDX41-214ENST00000512334 RIMBP3Q9UFD9 1639 aa27.15■■□□□ 1.94
DDX41-214ENST00000512334 ARHGEF11O15085 1522 aa27.13■■□□□ 1.93
DDX41-214ENST00000512334 CLASP1Q7Z460 1538 aa27.13■■□□□ 1.93
DDX41-214ENST00000512334 TRIM41Q8WV44 630 aa27.12■■□□□ 1.93
DDX41-214ENST00000512334 IGF1RP08069 1367 aa27.06■■□□□ 1.92
DDX41-214ENST00000512334 CEP170Q5SW79 1584 aa27.02■■□□□ 1.92
DDX41-214ENST00000512334 NUP160Q12769 1436 aa27.02■■□□□ 1.92
DDX41-214ENST00000512334 CUL7Q14999 1698 aa27.01■■□□□ 1.91
DDX41-214ENST00000512334 CYB5RLQ6IPT4 315 aa26.93■■□□□ 1.9
DDX41-214ENST00000512334 CARMIL1Q5VZK9 1371 aa26.93■■□□□ 1.9
DDX41-214ENST00000512334 RUSC2Q8N2Y8 1516 aa26.92■■□□□ 1.9
DDX41-214ENST00000512334 ARAP1Q96P48 1450 aa26.91■■□□□ 1.9
DDX41-214ENST00000512334 SHROOM2Q13796 1616 aa26.8■■□□□ 1.88
DDX41-214ENST00000512334 JPH4Q96JJ6 628 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms